RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 TOB2Q14106 344 aaPredicted RBP17.27■□□□□ 0.35
SENP3-208ENST00000583277 SART3Q15020 963 aaKnown RBP17.27■□□□□ 0.35
SENP3-208ENST00000583277 SPDYE2Q495Y8 402 aa17.27■□□□□ 0.35
SENP3-208ENST00000583277 RRP12Q5JTH9 1297 aaKnown RBP17.27■□□□□ 0.35
SENP3-208ENST00000583277 FKBP1CQ5VVH2 108 aa17.27■□□□□ 0.35
SENP3-208ENST00000583277 NOL8Q76FK4 1167 aaKnown RBP17.27■□□□□ 0.35
SENP3-208ENST00000583277 MICALL2Q8IY33 904 aa17.27■□□□□ 0.35
SENP3-208ENST00000583277 ZBED3Q96IU2 234 aaPredicted RBP17.27■□□□□ 0.35
SENP3-208ENST00000583277 TMEM87BQ96K49 555 aa17.27■□□□□ 0.35
SENP3-208ENST00000583277 ANTXR2P58335 489 aa17.26■□□□□ 0.35
SENP3-208ENST00000583277 C9orf131Q5VYM1 1079 aa17.26■□□□□ 0.35
SENP3-208ENST00000583277 ZNF70Q9UC06 446 aaPredicted RBP17.26■□□□□ 0.35
SENP3-208ENST00000583277 TACC3Q9Y6A5 838 aa17.26■□□□□ 0.35
SENP3-208ENST00000583277 PLCD1P51178 756 aa17.25■□□□□ 0.35
SENP3-208ENST00000583277 C16orf86Q6ZW13 317 aa17.25■□□□□ 0.35
SENP3-208ENST00000583277 CYB5R4Q7L1T6 521 aa17.25■□□□□ 0.35
SENP3-208ENST00000583277 STK11IPQ8N1F8 1099 aa17.25■□□□□ 0.35
SENP3-208ENST00000583277 BRF1Q92994 677 aa17.25■□□□□ 0.35
SENP3-208ENST00000583277 EHD4Q9H223 541 aa17.25■□□□□ 0.35
SENP3-208ENST00000583277 FAM198AQ9UFP1 575 aa17.25■□□□□ 0.35
SENP3-208ENST00000583277 CNOT7Q9UIV1 285 aaKnown RBP17.25■□□□□ 0.35
SENP3-208ENST00000583277 ANGEL1Q9UNK9 670 aaKnown RBP17.25■□□□□ 0.35
SENP3-208ENST00000583277 ATRNL1Q5VV63 1379 aa17.25■□□□□ 0.35
SENP3-208ENST00000583277 H7C1D1 291 aa17.24■□□□□ 0.35
SENP3-208ENST00000583277 CACNB3P54284 484 aa17.24■□□□□ 0.35
SENP3-208ENST00000583277 SLC4A8Q2Y0W8 1093 aa17.24■□□□□ 0.35
SENP3-208ENST00000583277 CHST3Q7LGC8 479 aa17.24■□□□□ 0.35
SENP3-208ENST00000583277 UBAC1Q9BSL1 405 aa17.24■□□□□ 0.35
SENP3-208ENST00000583277 LRRC2Q9BYS8 371 aa17.24■□□□□ 0.35
SENP3-208ENST00000583277 MKNK2Q9HBH9 465 aa17.24■□□□□ 0.35
SENP3-208ENST00000583277 INCENPQ9NQS7 918 aa17.24■□□□□ 0.35
SENP3-208ENST00000583277 ZSWIM5Q9P217 1185 aa17.24■□□□□ 0.35
SENP3-208ENST00000583277 SWAP70Q9UH65 585 aa17.24■□□□□ 0.35
SENP3-208ENST00000583277 SIPA1L1O43166 1804 aa17.24■□□□□ 0.35
SENP3-208ENST00000583277 ERICH2A1L162 156 aa17.23■□□□□ 0.35
SENP3-208ENST00000583277 SMIM22K7EJ46 135 aa17.23■□□□□ 0.35
SENP3-208ENST00000583277 WNT10BO00744 389 aa17.23■□□□□ 0.35
SENP3-208ENST00000583277 SH2B2O14492 632 aaPredicted RBP17.23■□□□□ 0.35
SENP3-208ENST00000583277 RANBP6O60518 1105 aaKnown RBP17.23■□□□□ 0.35
SENP3-208ENST00000583277 EVX2Q03828 476 aa17.23■□□□□ 0.35
SENP3-208ENST00000583277 CUL4AQ13619 759 aa17.23■□□□□ 0.35
SENP3-208ENST00000583277 IQCA1Q86XH1 822 aa17.23■□□□□ 0.35
SENP3-208ENST00000583277 GPRC5DQ9NZD1 345 aa17.23■□□□□ 0.35
SENP3-208ENST00000583277 SERPINB13Q9UIV8 391 aa17.23■□□□□ 0.35
SENP3-208ENST00000583277 TPCN1Q9ULQ1 816 aa17.23■□□□□ 0.35
SENP3-208ENST00000583277 CLRN2A0PK11 232 aa17.23■□□□□ 0.35
SENP3-208ENST00000583277 PRDM1O75626 825 aa17.23■□□□□ 0.35
SENP3-208ENST00000583277 EVCP57679 992 aa17.23■□□□□ 0.35
SENP3-208ENST00000583277 TCP10Q12799 353 aa17.23■□□□□ 0.35
SENP3-208ENST00000583277 KIF4BQ2VIQ3 1234 aa17.23■□□□□ 0.35
SENP3-208ENST00000583277 TMEM67Q5HYA8 995 aa17.23■□□□□ 0.35
SENP3-208ENST00000583277 FAM83AQ86UY5 434 aa17.23■□□□□ 0.35
SENP3-208ENST00000583277 DYNLL2Q96FJ2 89 aa17.23■□□□□ 0.35
SENP3-208ENST00000583277 INTS4Q96HW7 963 aaKnown RBP17.23■□□□□ 0.35
SENP3-208ENST00000583277 PI4KBQ9UBF8 816 aa17.23■□□□□ 0.35
SENP3-208ENST00000583277 SHTN1A0MZ66 631 aa17.22■□□□□ 0.35
SENP3-208ENST00000583277 IFIT3O14879 490 aaKnown RBP17.22■□□□□ 0.35
SENP3-208ENST00000583277 LIFRP42702 1097 aa17.22■□□□□ 0.35
SENP3-208ENST00000583277 CDK8P49336 464 aa17.22■□□□□ 0.35
SENP3-208ENST00000583277 GABPAQ06546 454 aa17.22■□□□□ 0.35
SENP3-208ENST00000583277 TNFAIP1Q13829 316 aa17.22■□□□□ 0.35
SENP3-208ENST00000583277 ZSCAN29Q8IWY8 852 aaPredicted RBP17.22■□□□□ 0.35
SENP3-208ENST00000583277 ZNF444Q8N0Y2 327 aaPredicted RBP17.22■□□□□ 0.35
SENP3-208ENST00000583277 CHMP4CQ96CF2 233 aa17.22■□□□□ 0.35
SENP3-208ENST00000583277 VEZTQ9HBM0 779 aa17.22■□□□□ 0.35
SENP3-208ENST00000583277 TSPY2A6NKD2 308 aa17.21■□□□□ 0.35
SENP3-208ENST00000583277 LMOD1P29536 600 aaPredicted RBP17.21■□□□□ 0.35
SENP3-208ENST00000583277 TNNI2P48788 182 aa17.21■□□□□ 0.35
SENP3-208ENST00000583277 ME3Q16798 604 aa17.21■□□□□ 0.35
SENP3-208ENST00000583277 NBPF9Q3BBW0 867 aa17.21■□□□□ 0.35
SENP3-208ENST00000583277 CCDC178Q5BJE1 867 aa17.21■□□□□ 0.35
SENP3-208ENST00000583277 SGMS1Q86VZ5 419 aa17.21■□□□□ 0.35
SENP3-208ENST00000583277 TMTC2Q8N394 836 aa17.21■□□□□ 0.35
SENP3-208ENST00000583277 IGDCC4Q8TDY8 1250 aa17.21■□□□□ 0.35
SENP3-208ENST00000583277 FAM151AQ8WW52 585 aa17.21■□□□□ 0.35
SENP3-208ENST00000583277 ZNF274Q96GC6 653 aaPredicted RBP17.21■□□□□ 0.35
SENP3-208ENST00000583277 LARP6Q9BRS8 491 aaKnown RBP17.21■□□□□ 0.35
SENP3-208ENST00000583277 TCP10L2B9ZVM9 353 aa17.2■□□□□ 0.34
SENP3-208ENST00000583277 RASA1P20936 1047 aa17.2■□□□□ 0.34
SENP3-208ENST00000583277 APOBRQ0VD83 1088 aa17.2■□□□□ 0.34
SENP3-208ENST00000583277 WTAPQ15007 396 aa17.2■□□□□ 0.34
SENP3-208ENST00000583277 DPY19L2Q6NUT2 758 aa17.2■□□□□ 0.34
SENP3-208ENST00000583277 CRACR2BQ8N4Y2 399 aaPredicted RBP17.2■□□□□ 0.34
SENP3-208ENST00000583277 SLC44A5Q8NCS7 719 aa17.2■□□□□ 0.34
SENP3-208ENST00000583277 NKX2-3Q8TAU0 364 aa17.2■□□□□ 0.34
SENP3-208ENST00000583277 ZSCAN10Q96SZ4 725 aaPredicted RBP17.2■□□□□ 0.34
SENP3-208ENST00000583277 TRIM34Q9BYJ4 488 aa17.2■□□□□ 0.34
SENP3-208ENST00000583277 LY9Q9HBG7 655 aa17.2■□□□□ 0.34
SENP3-208ENST00000583277 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.2■□□□□ 0.34
SENP3-208ENST00000583277 TNKSO95271 1327 aa17.2■□□□□ 0.34
SENP3-208ENST00000583277 CNTNAP1P78357 1384 aa17.2■□□□□ 0.34
SENP3-208ENST00000583277 PLIN4Q96Q06 1357 aa17.2■□□□□ 0.34
SENP3-208ENST00000583277 LARGE1O95461 756 aa17.19■□□□□ 0.34
SENP3-208ENST00000583277 TSPY3P0CV98 308 aa17.19■□□□□ 0.34
SENP3-208ENST00000583277 TSPY8P0CW00 308 aa17.19■□□□□ 0.34
SENP3-208ENST00000583277 TBC1D10BQ4KMP7 808 aaPredicted RBP17.19■□□□□ 0.34
SENP3-208ENST00000583277 RBM26Q5T8P6 1007 aaKnown RBP17.19■□□□□ 0.34
SENP3-208ENST00000583277 SAMD7Q7Z3H4 446 aa17.19■□□□□ 0.34
SENP3-208ENST00000583277 FOXP4Q8IVH2 680 aaPredicted RBP17.19■□□□□ 0.34
SENP3-208ENST00000583277 ZFPM1Q8IX07 1006 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms