RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 CETN1Q12798 172 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 ADCK5Q3MIX3 580 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 VWA3BQ502W6 1294 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 FANCBQ8NB91 859 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 PDS5AQ29RF7 1337 aaKnown RBP6.63□□□□□ -1.35
RTTN-209ENST00000583043 KRT86O43790 486 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 RFX5P48382 616 aaPredicted RBP6.63□□□□□ -1.35
RTTN-209ENST00000583043 MRPL12P52815 198 aaKnown RBP6.63□□□□□ -1.35
RTTN-209ENST00000583043 EVCP57679 992 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 RPS8P62241 208 aaKnown RBP6.63□□□□□ -1.35
RTTN-209ENST00000583043 EXOSC10Q01780 885 aaKnown RBP6.63□□□□□ -1.35
RTTN-209ENST00000583043 USP37Q86T82 979 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 STAG1Q8WVM7 1258 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 TCEANC2Q96MN5 208 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 CABP5Q9NP86 173 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 ZDHHC9Q9Y397 364 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 AKR1B15C9JRZ8 316 aaPredicted RBP6.63□□□□□ -1.35
RTTN-209ENST00000583043 FANCCQ00597 558 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 RRAGBQ5VZM2 374 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 CNNM4Q6P4Q7 775 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 APOA5Q6Q788 366 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 ZNF654Q8IZM8 581 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 TTLL11Q8NHH1 800 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 DDX12PQ92771 950 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 MRVI1Q9Y6F6 885 aa6.63□□□□□ -1.35
RTTN-209ENST00000583043 PRPF3O43395 683 aaKnown RBP6.62□□□□□ -1.35
RTTN-209ENST00000583043 KIF23Q02241 960 aaPredicted RBP6.62□□□□□ -1.35
RTTN-209ENST00000583043 TOB2Q14106 344 aaPredicted RBP6.62□□□□□ -1.35
RTTN-209ENST00000583043 KIF4BQ2VIQ3 1234 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 KRBA2Q6ZNG9 492 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 SMAP1Q8IYB5 467 aaPredicted RBP6.62□□□□□ -1.35
RTTN-209ENST00000583043 USP28Q96RU2 1077 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 NUP88Q99567 741 aaPredicted RBP6.62□□□□□ -1.35
RTTN-209ENST00000583043 SH2D4AQ9H788 454 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 KCNG1Q9UIX4 513 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 TSKSQ9UJT2 592 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 POSTNQ15063 836 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 TTC38Q5R3I4 469 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 KRT79Q5XKE5 535 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 LUZP1Q86V48 1076 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 RETREG2Q8NC44 543 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 C16orf45Q96MC5 204 aaPredicted RBP6.62□□□□□ -1.35
RTTN-209ENST00000583043 ZSCAN10Q96SZ4 725 aaPredicted RBP6.62□□□□□ -1.35
RTTN-209ENST00000583043 CALCOCO1Q9P1Z2 691 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 DNAI1Q9UI46 699 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 NALCNQ8IZF0 1738 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 RIMS1Q86UR5 1692 aaKnown RBP6.62□□□□□ -1.35
RTTN-209ENST00000583043 TULP1O00294 542 aaPredicted RBP6.62□□□□□ -1.35
RTTN-209ENST00000583043 STX10O60499 249 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 FOXO4P98177 505 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 PPP2R3AQ06190 1150 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 PDIA6Q15084 440 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 TRAPPC3LQ5T215 181 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 CCDC129Q6ZRS4 1044 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 CCDC84Q86UT8 332 aaPredicted RBP6.62□□□□□ -1.35
RTTN-209ENST00000583043 KLHDC4Q8TBB5 520 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 GOLGA1Q92805 767 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 MAP3K14Q99558 947 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 BSDC1Q9NW68 430 aaPredicted RBP6.62□□□□□ -1.35
RTTN-209ENST00000583043 PCDHA7Q9UN72 937 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 B4E1Z4 1266 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 URI1O94763 535 aaPredicted RBP6.62□□□□□ -1.35
RTTN-209ENST00000583043 PTGS1P23219 599 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 SEPT2Q15019 361 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 DGKHQ86XP1 1220 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 MB21D2Q8IYB1 491 aaPredicted RBP6.62□□□□□ -1.35
RTTN-209ENST00000583043 SUPT20HQ8NEM7 779 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 KIAA1524Q8TCG1 905 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 LMBR1Q8WVP7 490 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 FBXW7Q969H0 707 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 VTI1AQ96AJ9 217 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 LRRC2Q9BYS8 371 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 VIRMAQ69YN4 1812 aaKnown RBP6.62□□□□□ -1.35
RTTN-209ENST00000583043 GOLGA6L10A6NI86 522 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 GTPBP6O43824 516 aaPredicted RBP6.62□□□□□ -1.35
RTTN-209ENST00000583043 GNA14O95837 355 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 PARP1P09874 1014 aaKnown RBP6.62□□□□□ -1.35
RTTN-209ENST00000583043 CPA1P15085 419 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 CRACR2BQ8N4Y2 399 aaPredicted RBP6.62□□□□□ -1.35
RTTN-209ENST00000583043 BAG1Q99933 345 aaPredicted RBP6.62□□□□□ -1.35
RTTN-209ENST00000583043 SPTLC3Q9NUV7 552 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 ZNF609O15014 1411 aa6.62□□□□□ -1.35
RTTN-209ENST00000583043 CTAGE15A4D2H0 777 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 CTAGE8P0CG41 777 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 PFKFB1P16118 471 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 CTAGE6Q86UF2 777 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 CTAGE4Q8IX94 777 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 ENOX1Q8TC92 643 aaKnown RBP6.61□□□□□ -1.35
RTTN-209ENST00000583043 AGXT2Q9BYV1 514 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 IFNKQ9P0W0 207 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 MTIF2P46199 727 aaKnown RBP6.61□□□□□ -1.35
RTTN-209ENST00000583043 NONOQ15233 471 aaKnown RBP eCLIP6.61□□□□□ -1.35
RTTN-209ENST00000583043 GRIPAP1Q4V328 841 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 RC3H1Q5TC82 1133 aaKnown RBP6.61□□□□□ -1.35
RTTN-209ENST00000583043 CYP26C1Q6V0L0 522 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 TRIM47Q96LD4 638 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 TTC12Q9H892 705 aaPredicted RBP6.61□□□□□ -1.35
RTTN-209ENST00000583043 AXIN2Q9Y2T1 843 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 LOC102724428A0A0B4J2F2 783 aa6.61□□□□□ -1.35
RTTN-209ENST00000583043 H7C1D1 291 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms