RNA–Protein interactions for RNA: ENST00000582812.5

NDEL1-215, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-215ENST00000582812 BCAR3O75815 825 aa11.26□□□□□ -0.61
NDEL1-215ENST00000582812 EN2P19622 333 aaPredicted RBP11.26□□□□□ -0.61
NDEL1-215ENST00000582812 PSMC4P43686 418 aa11.26□□□□□ -0.61
NDEL1-215ENST00000582812 GJA8P48165 433 aa11.26□□□□□ -0.61
NDEL1-215ENST00000582812 ZKSCAN2Q63HK3 967 aa11.26□□□□□ -0.61
NDEL1-215ENST00000582812 SLAIN1Q8ND83 568 aa11.26□□□□□ -0.61
NDEL1-215ENST00000582812 SHISA4Q96DD7 197 aa11.26□□□□□ -0.61
NDEL1-215ENST00000582812 PICK1Q9NRD5 415 aa11.26□□□□□ -0.61
NDEL1-215ENST00000582812 ZHX2Q9Y6X8 837 aa11.26□□□□□ -0.61
NDEL1-215ENST00000582812 HOXA7P31268 230 aaPredicted RBP11.25□□□□□ -0.61
NDEL1-215ENST00000582812 GRK4P32298 578 aa11.25□□□□□ -0.61
NDEL1-215ENST00000582812 CAP2P40123 477 aa11.25□□□□□ -0.61
NDEL1-215ENST00000582812 GCLCP48506 637 aaPredicted RBP11.25□□□□□ -0.61
NDEL1-215ENST00000582812 FCGRTP55899 365 aa11.25□□□□□ -0.61
NDEL1-215ENST00000582812 G3BP1Q13283 466 aaKnown RBP eCLIP11.25□□□□□ -0.61
NDEL1-215ENST00000582812 TNNI3KQ59H18 835 aa11.25□□□□□ -0.61
NDEL1-215ENST00000582812 PI4KBQ9UBF8 816 aa11.25□□□□□ -0.61
NDEL1-215ENST00000582812 MORF4L1Q9UBU8 362 aa11.25□□□□□ -0.61
NDEL1-215ENST00000582812 ABCF2Q9UG63 623 aa11.25□□□□□ -0.61
NDEL1-215ENST00000582812 FPGT-TNNI3KV9GXZ4 949 aa11.25□□□□□ -0.61
NDEL1-215ENST00000582812 CDK5RAP2Q96SN8 1893 aa11.25□□□□□ -0.61
NDEL1-215ENST00000582812 MKRN4PQ13434 485 aaPredicted RBP11.24□□□□□ -0.61
NDEL1-215ENST00000582812 HABP4Q5JVS0 413 aaKnown RBP11.24□□□□□ -0.61
NDEL1-215ENST00000582812 PI16Q6UXB8 463 aa11.24□□□□□ -0.61
NDEL1-215ENST00000582812 FOXP4Q8IVH2 680 aaPredicted RBP11.24□□□□□ -0.61
NDEL1-215ENST00000582812 TMEM57Q8N5G2 664 aa11.24□□□□□ -0.61
NDEL1-215ENST00000582812 PRO3102Q9H379 93 aa11.24□□□□□ -0.61
NDEL1-215ENST00000582812 PAK6Q9NQU5 681 aaPredicted RBP11.24□□□□□ -0.61
NDEL1-215ENST00000582812 CPA4Q9UI42 421 aa11.24□□□□□ -0.61
NDEL1-215ENST00000582812 PNMA3Q9UL41 463 aa11.24□□□□□ -0.61
NDEL1-215ENST00000582812 BAG3O95817 575 aa11.23□□□□□ -0.61
NDEL1-215ENST00000582812 CYP2E1P05181 493 aaPredicted RBP11.23□□□□□ -0.61
NDEL1-215ENST00000582812 ASNSP08243 561 aa11.23□□□□□ -0.61
NDEL1-215ENST00000582812 ZNF280CQ8ND82 737 aa11.23□□□□□ -0.61
NDEL1-215ENST00000582812 CRISPLD2Q9H0B8 497 aa11.23□□□□□ -0.61
NDEL1-215ENST00000582812 EHD4Q9H223 541 aa11.23□□□□□ -0.61
NDEL1-215ENST00000582812 ZBED9Q6R2W3 1325 aa11.23□□□□□ -0.61
NDEL1-215ENST00000582812 MYPNQ86TC9 1320 aa11.23□□□□□ -0.61
NDEL1-215ENST00000582812 DNAH12Q6ZR08 3092 aa11.22□□□□□ -0.61
NDEL1-215ENST00000582812 USP17L5A8MUK1 530 aa11.22□□□□□ -0.61
NDEL1-215ENST00000582812 CYP2C8P10632 490 aa11.22□□□□□ -0.61
NDEL1-215ENST00000582812 PABPC4Q13310 644 aaKnown RBP eCLIP11.22□□□□□ -0.61
NDEL1-215ENST00000582812 DDX60LQ5H9U9 1706 aaKnown RBP11.22□□□□□ -0.61
NDEL1-215ENST00000582812 CCDC158Q5M9N0 1113 aa11.22□□□□□ -0.61
NDEL1-215ENST00000582812 SH3TC2Q8TF17 1288 aa11.22□□□□□ -0.61
NDEL1-215ENST00000582812 ATAD5Q96QE3 1844 aa11.22□□□□□ -0.61
NDEL1-215ENST00000582812 DNAJC18Q9H819 358 aa11.22□□□□□ -0.61
NDEL1-215ENST00000582812 DBNLQ9UJU6 430 aaKnown RBP11.22□□□□□ -0.61
NDEL1-215ENST00000582812 TNNQ9UQP3 1299 aa11.22□□□□□ -0.61
NDEL1-215ENST00000582812 FLT1P17948 1338 aa11.21□□□□□ -0.61
NDEL1-215ENST00000582812 A0A1W2PPC1 479 aa11.21□□□□□ -0.61
NDEL1-215ENST00000582812 C19orf81C9J6K1 198 aa11.21□□□□□ -0.61
NDEL1-215ENST00000582812 RLBP1P12271 317 aa11.21□□□□□ -0.61
NDEL1-215ENST00000582812 XRCC5P13010 732 aaKnown RBP11.21□□□□□ -0.61
NDEL1-215ENST00000582812 BACE1P56817 501 aa11.21□□□□□ -0.61
NDEL1-215ENST00000582812 UBXN2AP68543 259 aa11.21□□□□□ -0.61
NDEL1-215ENST00000582812 PRKCZQ05513 592 aa11.21□□□□□ -0.61
NDEL1-215ENST00000582812 RRP1BQ14684 758 aaKnown RBP11.21□□□□□ -0.61
NDEL1-215ENST00000582812 GORABQ5T7V8 394 aa11.21□□□□□ -0.61
NDEL1-215ENST00000582812 TATDN1Q6P1N9 297 aa11.21□□□□□ -0.61
NDEL1-215ENST00000582812 TBC1D9Q6ZT07 1266 aa11.21□□□□□ -0.61
NDEL1-215ENST00000582812 TEX11Q8IYF3 940 aa11.21□□□□□ -0.61
NDEL1-215ENST00000582812 RAET1EQ8TD07 263 aa11.21□□□□□ -0.61
NDEL1-215ENST00000582812 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.21□□□□□ -0.61
NDEL1-215ENST00000582812 GTF3C2Q8WUA4 911 aaPredicted RBP11.21□□□□□ -0.61
NDEL1-215ENST00000582812 C12orf42Q96LP6 360 aa11.21□□□□□ -0.61
NDEL1-215ENST00000582812 NEUROD6Q96NK8 337 aa11.21□□□□□ -0.61
NDEL1-215ENST00000582812 DBNDD2Q9BQY9 259 aa11.21□□□□□ -0.61
NDEL1-215ENST00000582812 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.21□□□□□ -0.61
NDEL1-215ENST00000582812 LRP2BPQ9P2M1 347 aa11.21□□□□□ -0.61
NDEL1-215ENST00000582812 GJD2Q9UKL4 321 aa11.21□□□□□ -0.61
NDEL1-215ENST00000582812 LAMA2P24043 3122 aaKnown RBP11.21□□□□□ -0.62
NDEL1-215ENST00000582812 FMNL1O95466 1100 aaPredicted RBP11.2□□□□□ -0.62
NDEL1-215ENST00000582812 CCL5P13501 91 aa11.2□□□□□ -0.62
NDEL1-215ENST00000582812 FLT3LGP49771 235 aa11.2□□□□□ -0.62
NDEL1-215ENST00000582812 FXR1P51114 621 aaKnown RBP eCLIP11.2□□□□□ -0.62
NDEL1-215ENST00000582812 MTFR1Q15390 333 aa11.2□□□□□ -0.62
NDEL1-215ENST00000582812 SLC4A8Q2Y0W8 1093 aa11.2□□□□□ -0.62
NDEL1-215ENST00000582812 TREML2Q5T2D2 321 aa11.2□□□□□ -0.62
NDEL1-215ENST00000582812 MAP3K21Q5TCX8 1036 aa11.2□□□□□ -0.62
NDEL1-215ENST00000582812 NAA16Q6N069 864 aaPredicted RBP11.2□□□□□ -0.62
NDEL1-215ENST00000582812 CEP85Q6P2H3 762 aa11.2□□□□□ -0.62
NDEL1-215ENST00000582812 LBX2Q6XYB7 198 aa11.2□□□□□ -0.62
NDEL1-215ENST00000582812 ADGRA1Q86SQ6 560 aa11.2□□□□□ -0.62
NDEL1-215ENST00000582812 ERC1Q8IUD2 1116 aa11.2□□□□□ -0.62
NDEL1-215ENST00000582812 ZSCAN29Q8IWY8 852 aaPredicted RBP11.2□□□□□ -0.62
NDEL1-215ENST00000582812 ANKLE1Q8NAG6 615 aa11.2□□□□□ -0.62
NDEL1-215ENST00000582812 SH3RF3Q8TEJ3 882 aaPredicted RBP11.2□□□□□ -0.62
NDEL1-215ENST00000582812 EAF2Q96CJ1 260 aaPredicted RBP11.2□□□□□ -0.62
NDEL1-215ENST00000582812 AS3MTQ9HBK9 375 aa11.2□□□□□ -0.62
NDEL1-215ENST00000582812 RAI14Q9P0K7 980 aa11.2□□□□□ -0.62
NDEL1-215ENST00000582812 TRIM75PA6NK02 468 aa11.19□□□□□ -0.62
NDEL1-215ENST00000582812 ADCY3O60266 1144 aa11.19□□□□□ -0.62
NDEL1-215ENST00000582812 SGPL1O95470 568 aa11.19□□□□□ -0.62
NDEL1-215ENST00000582812 IGHA2P01877 340 aa11.19□□□□□ -0.62
NDEL1-215ENST00000582812 SPP2Q13103 211 aa11.19□□□□□ -0.62
NDEL1-215ENST00000582812 PICALMQ13492 652 aa11.19□□□□□ -0.62
NDEL1-215ENST00000582812 HSP90AB4PQ58FF6 505 aa11.19□□□□□ -0.62
NDEL1-215ENST00000582812 SMCR8Q8TEV9 937 aaPredicted RBP11.19□□□□□ -0.62
NDEL1-215ENST00000582812 U2AF1L4Q8WU68 220 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms