RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-215	ENST00000582453	SMARCA4	P51532	1647 aa		5.23	□□□□□ -1.57
MSI2-215	ENST00000582453	PRR19	A6NJB7	356 aa		5.23	□□□□□ -1.57
MSI2-215	ENST00000582453	COBL	O75128	1261 aa		5.23	□□□□□ -1.57
MSI2-215	ENST00000582453	TGFB1	P01137	390 aa		5.23	□□□□□ -1.57
MSI2-215	ENST00000582453	GRIK1	P39086	918 aa		5.23	□□□□□ -1.57
MSI2-215	ENST00000582453	RPL6	Q02878	288 aa	Known RBP	5.23	□□□□□ -1.57
MSI2-215	ENST00000582453	CAMK2G	Q13555	558 aa	Predicted RBP	5.23	□□□□□ -1.57
MSI2-215	ENST00000582453	LRP8	Q14114	963 aa		5.23	□□□□□ -1.57
MSI2-215	ENST00000582453	DUSP27	Q5VZP5	1158 aa		5.23	□□□□□ -1.57
MSI2-215	ENST00000582453	INTS5	Q6P9B9	1019 aa	Known RBP	5.23	□□□□□ -1.57
MSI2-215	ENST00000582453	HS2ST1	Q7LGA3	356 aa		5.23	□□□□□ -1.57
MSI2-215	ENST00000582453	TMEM87A	Q8NBN3	555 aa		5.23	□□□□□ -1.57
MSI2-215	ENST00000582453	BACH2	Q9BYV9	841 aa		5.23	□□□□□ -1.57
MSI2-215	ENST00000582453	PIM2	Q9P1W9	311 aa		5.23	□□□□□ -1.57
MSI2-215	ENST00000582453	LEMD3	Q9Y2U8	911 aa		5.23	□□□□□ -1.57
MSI2-215	ENST00000582453	SMARCA2	P51531	1590 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	ATAD2B	Q9ULI0	1458 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	SCO2	A0A1W2PP80	73 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	PRAMEF27	A3QJZ7	478 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	FAM170B	A6NMN3	283 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	GFRA2	O00451	464 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	PF4	P02776	101 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	CD97	P48960	835 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	CDK8	P49336	464 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	CYP27C1	Q4G0S4	372 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	ARTN	Q5T4W7	220 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	LDLRAD1	Q5T700	205 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	OGFOD3	Q6PK18	319 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	CDC37L1	Q7L3B6	337 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	SHISA5	Q8N114	240 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	ZNF507	Q8TCN5	953 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	GATAD2B	Q8WXI9	593 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	PSMG3-AS1	Q96PY0	264 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	WNT10A	Q9GZT5	417 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	LGR6	Q9HBX8	967 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	METTL5	Q9NRN9	209 aa	Known RBP	5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	KBTBD4	Q9NVX7	518 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	GGT7	Q9UJ14	662 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	CC2D2A	Q9P2K1	1620 aa		5.22	□□□□□ -1.57
MSI2-215	ENST00000582453	FAM221A	A4D161	298 aa		5.21	□□□□□ -1.58
MSI2-215	ENST00000582453		F6X3S4	739 aa		5.21	□□□□□ -1.58
MSI2-215	ENST00000582453	CILP	O75339	1184 aa		5.21	□□□□□ -1.58
MSI2-215	ENST00000582453	BPNT1	O95861	308 aa		5.21	□□□□□ -1.58
MSI2-215	ENST00000582453	FOSL1	P15407	271 aa		5.21	□□□□□ -1.58
MSI2-215	ENST00000582453	ZNF76	P36508	570 aa		5.21	□□□□□ -1.58
MSI2-215	ENST00000582453	CAP2	P40123	477 aa		5.21	□□□□□ -1.58
MSI2-215	ENST00000582453	ETF1	P62495	437 aa	Known RBP	5.21	□□□□□ -1.58
MSI2-215	ENST00000582453	CDK5R2	Q13319	367 aa		5.21	□□□□□ -1.58
MSI2-215	ENST00000582453	SNAP47	Q5SQN1	464 aa		5.21	□□□□□ -1.58
MSI2-215	ENST00000582453	BNC2	Q6ZN30	1099 aa	Predicted RBP	5.21	□□□□□ -1.58
MSI2-215	ENST00000582453	ZNF765	Q7L2R6	523 aa		5.21	□□□□□ -1.58
MSI2-215	ENST00000582453	JARID2	Q92833	1246 aa	Predicted RBP	5.21	□□□□□ -1.58
MSI2-215	ENST00000582453	KCNQ5	Q9NR82	932 aa		5.21	□□□□□ -1.58
MSI2-215	ENST00000582453	HMGXB3	Q12766	1538 aa		5.21	□□□□□ -1.58
MSI2-215	ENST00000582453	MROH2B	Q7Z745	1585 aa		5.21	□□□□□ -1.58
MSI2-215	ENST00000582453	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	5.2	□□□□□ -1.58
MSI2-215	ENST00000582453	MINDY4B	A8MYZ0	360 aa		5.2	□□□□□ -1.58
MSI2-215	ENST00000582453	CYP26A1	O43174	497 aa		5.2	□□□□□ -1.58
MSI2-215	ENST00000582453	F13A1	P00488	732 aa		5.2	□□□□□ -1.58
MSI2-215	ENST00000582453	FAM87A	P0C7U9	286 aa		5.2	□□□□□ -1.58
MSI2-215	ENST00000582453	PDE4B	Q07343	736 aa		5.2	□□□□□ -1.58
MSI2-215	ENST00000582453	HID1	Q8IV36	788 aa		5.2	□□□□□ -1.58
MSI2-215	ENST00000582453		Q8N3U1	123 aa		5.2	□□□□□ -1.58
MSI2-215	ENST00000582453	DUSP23	Q9BVJ7	150 aa		5.2	□□□□□ -1.58
MSI2-215	ENST00000582453	ZFP64	Q9NPA5	681 aa		5.2	□□□□□ -1.58
MSI2-215	ENST00000582453	COPRS	Q9NQ92	184 aa		5.2	□□□□□ -1.58
MSI2-215	ENST00000582453	RSF1	Q96T23	1441 aa	Predicted RBP	5.2	□□□□□ -1.58
MSI2-215	ENST00000582453	ROBO2	Q9HCK4	1378 aa		5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	HYAL3	O43820	417 aa	Predicted RBP	5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	LRIG2	O94898	1065 aa		5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	RECK	O95980	971 aa		5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	GART	P22102	1010 aa		5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	SSTR4	P31391	388 aa		5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	GRK4	P32298	578 aa		5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	EIF4A3	P38919	411 aa	Known RBP	5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	FANCC	Q00597	558 aa		5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	FAM160A1	Q05DH4	1040 aa		5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	MPP2	Q14168	576 aa		5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	FAM196A	Q6ZSG2	479 aa		5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	ARMCX6	Q7L4S7	300 aa		5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	UBE3D	Q7Z6J8	389 aa		5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	GOLM1	Q8NBJ4	401 aa		5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	MRRF	Q96E11	262 aa	Known RBP	5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	FBRS	Q9HAH7	460 aa		5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	PRDM10	Q9NQV6	1147 aa		5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	PCMTD2	Q9NV79	361 aa		5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	ADAM30	Q9UKF2	790 aa		5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	SUPT16H	Q9Y5B9	1047 aa	Known RBP	5.19	□□□□□ -1.58
MSI2-215	ENST00000582453	SCAMP3	O14828	347 aa	Known RBP	5.18	□□□□□ -1.58
MSI2-215	ENST00000582453	PGR	P06401	933 aa		5.18	□□□□□ -1.58
MSI2-215	ENST00000582453	SPINK2	P20155	84 aa		5.18	□□□□□ -1.58
MSI2-215	ENST00000582453	HOXA10	P31260	410 aa	Predicted RBP	5.18	□□□□□ -1.58
MSI2-215	ENST00000582453	SLBP	Q14493	270 aa	Known RBP eCLIP	5.18	□□□□□ -1.58
MSI2-215	ENST00000582453	MSMP	Q1L6U9	139 aa		5.18	□□□□□ -1.58
MSI2-215	ENST00000582453	FBXL19	Q6PCT2	694 aa		5.18	□□□□□ -1.58
MSI2-215	ENST00000582453	DTX1	Q86Y01	620 aa		5.18	□□□□□ -1.58
MSI2-215	ENST00000582453	TOP6BL	Q8N6T0	577 aa		5.18	□□□□□ -1.58
MSI2-215	ENST00000582453	MFSD2A	Q8NA29	543 aa		5.18	□□□□□ -1.58
MSI2-215	ENST00000582453	LRRC3	Q9BY71	257 aa		5.18	□□□□□ -1.58
MSI2-215	ENST00000582453	FOXQ1	Q9C009	403 aa		5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms