RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 MAP2K1Q02750 393 aaPredicted RBP7.98□□□□□ -1.13
COPS3-216ENST00000579716 RBL2Q08999 1139 aa7.98□□□□□ -1.13
COPS3-216ENST00000579716 VPS72Q15906 364 aa7.98□□□□□ -1.13
COPS3-216ENST00000579716 NFE2L2Q16236 605 aa7.98□□□□□ -1.13
COPS3-216ENST00000579716 MAP9Q49MG5 647 aa7.98□□□□□ -1.13
COPS3-216ENST00000579716 CCDC184Q52MB2 194 aa7.98□□□□□ -1.13
COPS3-216ENST00000579716 TTC39BQ5VTQ0 682 aaPredicted RBP7.98□□□□□ -1.13
COPS3-216ENST00000579716 INTS5Q6P9B9 1019 aaKnown RBP7.98□□□□□ -1.13
COPS3-216ENST00000579716 STAG1Q8WVM7 1258 aa7.98□□□□□ -1.13
COPS3-216ENST00000579716 FRMD6Q96NE9 622 aa7.98□□□□□ -1.13
COPS3-216ENST00000579716 BACH2Q9BYV9 841 aa7.98□□□□□ -1.13
COPS3-216ENST00000579716 TMEM63CQ9P1W3 806 aa7.98□□□□□ -1.13
COPS3-216ENST00000579716 IFRD1O00458 451 aaPredicted RBP7.97□□□□□ -1.13
COPS3-216ENST00000579716 PPP1R12AO14974 1030 aaPredicted RBP7.97□□□□□ -1.13
COPS3-216ENST00000579716 TRPA1O75762 1119 aa7.97□□□□□ -1.13
COPS3-216ENST00000579716 SMNDC1O75940 238 aaKnown RBP eCLIP7.97□□□□□ -1.13
COPS3-216ENST00000579716 BMP3P12645 472 aa7.97□□□□□ -1.13
COPS3-216ENST00000579716 FLT3P36888 993 aa7.97□□□□□ -1.13
COPS3-216ENST00000579716 ELOAQ14241 798 aaKnown RBP7.97□□□□□ -1.13
COPS3-216ENST00000579716 CDC37Q16543 378 aaPredicted RBP7.97□□□□□ -1.13
COPS3-216ENST00000579716 CCDC92Q53HC0 331 aaPredicted RBP7.97□□□□□ -1.13
COPS3-216ENST00000579716 CC2D1AQ6P1N0 951 aaPredicted RBP7.97□□□□□ -1.13
COPS3-216ENST00000579716 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.97□□□□□ -1.13
COPS3-216ENST00000579716 JAZF1Q86VZ6 243 aa7.97□□□□□ -1.13
COPS3-216ENST00000579716 RSPH1Q8WYR4 309 aa7.97□□□□□ -1.13
COPS3-216ENST00000579716 HHIPQ96QV1 700 aa7.97□□□□□ -1.13
COPS3-216ENST00000579716 TINF2Q9BSI4 451 aa7.97□□□□□ -1.13
COPS3-216ENST00000579716 MKNK1Q9BUB5 465 aa7.97□□□□□ -1.13
COPS3-216ENST00000579716 TYW1Q9NV66 732 aaKnown RBP7.97□□□□□ -1.13
COPS3-216ENST00000579716 ABI2Q9NYB9 513 aaPredicted RBP7.97□□□□□ -1.13
COPS3-216ENST00000579716 CXXC1Q9P0U4 656 aaPredicted RBP7.97□□□□□ -1.13
COPS3-216ENST00000579716 SALL4Q9UJQ4 1053 aa7.97□□□□□ -1.13
COPS3-216ENST00000579716 ISY1Q9ULR0 285 aaKnown RBP7.97□□□□□ -1.13
COPS3-216ENST00000579716 RNF114Q9Y508 228 aa7.97□□□□□ -1.13
COPS3-216ENST00000579716 NPHP1O15259 732 aa7.96□□□□□ -1.14
COPS3-216ENST00000579716 PDGFRBP09619 1106 aa7.96□□□□□ -1.14
COPS3-216ENST00000579716 ATICP31939 592 aa7.96□□□□□ -1.14
COPS3-216ENST00000579716 SCNN1AP37088 669 aa7.96□□□□□ -1.14
COPS3-216ENST00000579716 TNNT2P45379 298 aaPredicted RBP7.96□□□□□ -1.14
COPS3-216ENST00000579716 USP5P45974 858 aa7.96□□□□□ -1.14
COPS3-216ENST00000579716 TERF1P54274 439 aa7.96□□□□□ -1.14
COPS3-216ENST00000579716 PSMD2Q13200 908 aa7.96□□□□□ -1.14
COPS3-216ENST00000579716 BEND4Q6ZU67 534 aa7.96□□□□□ -1.14
COPS3-216ENST00000579716 FBXO33Q7Z6M2 555 aa7.96□□□□□ -1.14
COPS3-216ENST00000579716 ZNF830Q96NB3 372 aaPredicted RBP7.96□□□□□ -1.14
COPS3-216ENST00000579716 OSBPL2Q9H1P3 480 aa7.96□□□□□ -1.14
COPS3-216ENST00000579716 RETREG1Q9H6L5 497 aa7.96□□□□□ -1.14
COPS3-216ENST00000579716 RBM28Q9NW13 759 aaKnown RBP7.96□□□□□ -1.14
COPS3-216ENST00000579716 BIN2Q9UBW5 565 aaPredicted RBP7.96□□□□□ -1.14
COPS3-216ENST00000579716 CENPJQ9HC77 1338 aaPredicted RBP7.96□□□□□ -1.14
COPS3-216ENST00000579716 KIF3BO15066 747 aa7.95□□□□□ -1.14
COPS3-216ENST00000579716 HIP1RO75146 1068 aa7.95□□□□□ -1.14
COPS3-216ENST00000579716 FOSP01100 380 aaPredicted RBP7.95□□□□□ -1.14
COPS3-216ENST00000579716 YBX3P16989 372 aaKnown RBP eCLIP7.95□□□□□ -1.141e-9■■□□□ 14.4
COPS3-216ENST00000579716 TDO2P48775 406 aa7.95□□□□□ -1.14
COPS3-216ENST00000579716 RAD51AP2Q09MP3 1159 aa7.95□□□□□ -1.14
COPS3-216ENST00000579716 GNL2Q13823 731 aaKnown RBP7.95□□□□□ -1.14
COPS3-216ENST00000579716 COL19A1Q14993 1142 aa7.95□□□□□ -1.14
COPS3-216ENST00000579716 SAMD3Q8N6K7 520 aa7.95□□□□□ -1.14
COPS3-216ENST00000579716 VPS37AQ8NEZ2 397 aa7.95□□□□□ -1.14
COPS3-216ENST00000579716 MPHOSPH6Q99547 160 aaKnown RBP7.95□□□□□ -1.14
COPS3-216ENST00000579716 TMX1Q9H3N1 280 aa7.95□□□□□ -1.14
COPS3-216ENST00000579716 CAPN10Q9HC96 672 aa7.95□□□□□ -1.14
COPS3-216ENST00000579716 SEC31BQ9NQW1 1179 aa7.95□□□□□ -1.14
COPS3-216ENST00000579716 PRDM4Q9UKN5 801 aa7.95□□□□□ -1.14
COPS3-216ENST00000579716 ODF2LQ9ULJ1 636 aa7.95□□□□□ -1.14
COPS3-216ENST00000579716 WNT11O96014 354 aa7.94□□□□□ -1.14
COPS3-216ENST00000579716 CT47B1P0C2W7 299 aaPredicted RBP7.94□□□□□ -1.14
COPS3-216ENST00000579716 ODR4Q5SWX8 454 aa7.94□□□□□ -1.14
COPS3-216ENST00000579716 CCDC89Q8N998 374 aa7.94□□□□□ -1.14
COPS3-216ENST00000579716 APBA2Q99767 749 aa7.94□□□□□ -1.14
COPS3-216ENST00000579716 PAIP2Q9BPZ3 127 aaKnown RBP7.94□□□□□ -1.14
COPS3-216ENST00000579716 ELP3Q9H9T3 547 aa7.94□□□□□ -1.14
COPS3-216ENST00000579716 STIM2Q9P246 746 aa7.94□□□□□ -1.14
COPS3-216ENST00000579716 KANSL3Q9P2N6 904 aa7.94□□□□□ -1.14
COPS3-216ENST00000579716 CAND2O75155 1236 aa7.93□□□□□ -1.14
COPS3-216ENST00000579716 DLGAP3O95886 979 aa7.93□□□□□ -1.14
COPS3-216ENST00000579716 TAGLNQ01995 201 aaKnown RBP7.93□□□□□ -1.14
COPS3-216ENST00000579716 RAPGEF1Q13905 1077 aa7.93□□□□□ -1.14
COPS3-216ENST00000579716 BRD3Q15059 726 aa7.93□□□□□ -1.14
COPS3-216ENST00000579716 ATCAYQ86WG3 371 aa7.93□□□□□ -1.14
COPS3-216ENST00000579716 C1orf127Q8N9H9 656 aa7.93□□□□□ -1.14
COPS3-216ENST00000579716 TTC14Q96N46 770 aa7.93□□□□□ -1.14
COPS3-216ENST00000579716 DZANK1Q9NVP4 752 aa7.93□□□□□ -1.14
COPS3-216ENST00000579716 PRKAB1Q9Y478 270 aa7.93□□□□□ -1.14
COPS3-216ENST00000579716 MRPL42Q9Y6G3 142 aaKnown RBP7.93□□□□□ -1.14
COPS3-216ENST00000579716 MEGF11A6BM72 1044 aa7.92□□□□□ -1.14
COPS3-216ENST00000579716 GOLGA6L6A8MZA4 724 aa7.92□□□□□ -1.14
COPS3-216ENST00000579716 WDR64B1ANS9 1081 aa7.92□□□□□ -1.14
COPS3-216ENST00000579716 PTPRAP18433 802 aa7.92□□□□□ -1.14
COPS3-216ENST00000579716 KRT77Q7Z794 578 aa7.92□□□□□ -1.14
COPS3-216ENST00000579716 HSCBQ8IWL3 235 aa7.92□□□□□ -1.14
COPS3-216ENST00000579716 CHPFQ8IZ52 775 aa7.92□□□□□ -1.14
COPS3-216ENST00000579716 ABI1Q8IZP0 508 aa7.92□□□□□ -1.14
COPS3-216ENST00000579716 CFAP53Q96M91 514 aa7.92□□□□□ -1.14
COPS3-216ENST00000579716 LRRC27Q9C0I9 530 aa7.92□□□□□ -1.14
COPS3-216ENST00000579716 GGNBP2Q9H3C7 697 aa7.92□□□□□ -1.14
COPS3-216ENST00000579716 CCSER2Q9H7U1 834 aa7.92□□□□□ -1.14
COPS3-216ENST00000579716 YY1AP1Q9H869 796 aa7.92□□□□□ -1.14
COPS3-216ENST00000579716 SOX13Q9UN79 622 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms