RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 BBOX1O75936 387 aa5.18□□□□□ -1.58
PTPRM-206ENST00000578093 ZNF157P51786 506 aaPredicted RBP5.18□□□□□ -1.58
PTPRM-206ENST00000578093 NR5A1Q13285 461 aa5.18□□□□□ -1.58
PTPRM-206ENST00000578093 TNIP1Q15025 636 aa5.18□□□□□ -1.58
PTPRM-206ENST00000578093 DDX46Q7L014 1031 aaKnown RBP5.18□□□□□ -1.58
PTPRM-206ENST00000578093 RNF135Q8IUD6 432 aa5.18□□□□□ -1.58
PTPRM-206ENST00000578093 NPAS3Q8IXF0 933 aa5.18□□□□□ -1.58
PTPRM-206ENST00000578093 CYP4X1Q8N118 509 aa5.18□□□□□ -1.58
PTPRM-206ENST00000578093 CCDC82Q8N4S0 544 aa5.18□□□□□ -1.58
PTPRM-206ENST00000578093 SNIP1Q8TAD8 396 aaKnown RBP5.18□□□□□ -1.58
PTPRM-206ENST00000578093 ADAMTS19Q8TE59 1207 aa5.18□□□□□ -1.58
PTPRM-206ENST00000578093 DPF2Q92785 391 aa5.18□□□□□ -1.58
PTPRM-206ENST00000578093 FAM89AQ96GI7 184 aa5.18□□□□□ -1.58
PTPRM-206ENST00000578093 CDK15Q96Q40 435 aa5.18□□□□□ -1.58
PTPRM-206ENST00000578093 CSRNP1Q96S65 589 aa5.18□□□□□ -1.58
PTPRM-206ENST00000578093 SAGE1Q9NXZ1 904 aa5.18□□□□□ -1.58
PTPRM-206ENST00000578093 PKD2L1Q9P0L9 805 aa5.18□□□□□ -1.58
PTPRM-206ENST00000578093 CHPF2Q9P2E5 772 aa5.18□□□□□ -1.58
PTPRM-206ENST00000578093 TRMT112Q9UI30 125 aaKnown RBP5.18□□□□□ -1.58
PTPRM-206ENST00000578093 WASF2Q9Y6W5 498 aa5.18□□□□□ -1.58
PTPRM-206ENST00000578093 RANBP2P49792 3224 aaKnown RBP5.18□□□□□ -1.58
PTPRM-206ENST00000578093 WTIPA6NIX2 430 aaPredicted RBP5.17□□□□□ -1.58
PTPRM-206ENST00000578093 ATP5J2-PTCD1G3V325 749 aa5.17□□□□□ -1.58
PTPRM-206ENST00000578093 ADH1CP00326 375 aa5.17□□□□□ -1.58
PTPRM-206ENST00000578093 ALDH1A1P00352 501 aa5.17□□□□□ -1.58
PTPRM-206ENST00000578093 DHX9Q08211 1270 aaKnown RBP5.17□□□□□ -1.58
PTPRM-206ENST00000578093 TCIRG1Q13488 830 aa5.17□□□□□ -1.58
PTPRM-206ENST00000578093 HSP90AB3PQ58FF7 597 aa5.17□□□□□ -1.58
PTPRM-206ENST00000578093 ANGEL2Q5VTE6 544 aaKnown RBP5.17□□□□□ -1.58
PTPRM-206ENST00000578093 CTU1Q7Z7A3 348 aaKnown RBP5.17□□□□□ -1.58
PTPRM-206ENST00000578093 TBC1D16Q8TBP0 767 aa5.17□□□□□ -1.58
PTPRM-206ENST00000578093 ARID3AQ99856 593 aa5.17□□□□□ -1.58
PTPRM-206ENST00000578093 ISCA1Q9BUE6 129 aa5.17□□□□□ -1.58
PTPRM-206ENST00000578093 TMX4Q9H1E5 349 aaPredicted RBP5.17□□□□□ -1.58
PTPRM-206ENST00000578093 SEC31BQ9NQW1 1179 aa5.17□□□□□ -1.58
PTPRM-206ENST00000578093 NSFL1CQ9UNZ2 370 aaKnown RBP5.17□□□□□ -1.58
PTPRM-206ENST00000578093 MAPK8IP3Q9UPT6 1336 aa5.17□□□□□ -1.58
PTPRM-206ENST00000578093 SSC5DA1L4H1 1573 aa5.16□□□□□ -1.58
PTPRM-206ENST00000578093 ATP9BO43861 1147 aa5.16□□□□□ -1.58
PTPRM-206ENST00000578093 LZTS3O60299 673 aaPredicted RBP5.16□□□□□ -1.58
PTPRM-206ENST00000578093 TBC1D8O95759 1140 aa5.16□□□□□ -1.58
PTPRM-206ENST00000578093 VIL1P09327 827 aaKnown RBP5.16□□□□□ -1.58
PTPRM-206ENST00000578093 SKIP12755 728 aa5.16□□□□□ -1.58
PTPRM-206ENST00000578093 RPS12P25398 132 aaKnown RBP5.16□□□□□ -1.58
PTPRM-206ENST00000578093 TMPOP42166 694 aaKnown RBP5.16□□□□□ -1.58
PTPRM-206ENST00000578093 SF3B3Q15393 1217 aaKnown RBP5.16□□□□□ -1.58
PTPRM-206ENST00000578093 MAP7D1Q3KQU3 841 aa5.16□□□□□ -1.58
PTPRM-206ENST00000578093 PRAMEF18Q5VWM3 479 aa5.16□□□□□ -1.58
PTPRM-206ENST00000578093 C2orf69Q8N8R5 385 aa5.16□□□□□ -1.58
PTPRM-206ENST00000578093 ZNF296Q8WUU4 475 aaPredicted RBP5.16□□□□□ -1.58
PTPRM-206ENST00000578093 DCPSQ96C86 337 aaKnown RBP5.16□□□□□ -1.58
PTPRM-206ENST00000578093 MXD3Q9BW11 206 aa5.16□□□□□ -1.58
PTPRM-206ENST00000578093 PPP1R12CQ9BZL4 782 aa5.16□□□□□ -1.58
PTPRM-206ENST00000578093 R3HDMLQ9H3Y0 253 aa5.16□□□□□ -1.58
PTPRM-206ENST00000578093 C1orf115Q9H7X2 142 aa5.16□□□□□ -1.58
PTPRM-206ENST00000578093 FZD1Q9UP38 647 aa5.16□□□□□ -1.58
PTPRM-206ENST00000578093 ARAP2Q8WZ64 1704 aa5.16□□□□□ -1.58
PTPRM-206ENST00000578093 COL6A3P12111 3177 aa5.15□□□□□ -1.58
PTPRM-206ENST00000578093 ESPNB1AK53 854 aa5.15□□□□□ -1.59
PTPRM-206ENST00000578093 UBE2Q2LH0YL09 131 aa5.15□□□□□ -1.59
PTPRM-206ENST00000578093 H3BM21 787 aa5.15□□□□□ -1.59
PTPRM-206ENST00000578093 IRS4O14654 1257 aaPredicted RBP5.15□□□□□ -1.59
PTPRM-206ENST00000578093 UFL1O94874 794 aa5.15□□□□□ -1.59
PTPRM-206ENST00000578093 FSHRP23945 695 aa5.15□□□□□ -1.59
PTPRM-206ENST00000578093 RIPK4P57078 832 aa5.15□□□□□ -1.59
PTPRM-206ENST00000578093 RAB15P59190 212 aa5.15□□□□□ -1.59
PTPRM-206ENST00000578093 ZNF280AP59817 542 aaPredicted RBP5.15□□□□□ -1.59
PTPRM-206ENST00000578093 FOXK2Q01167 660 aa5.15□□□□□ -1.59
PTPRM-206ENST00000578093 SCARF1Q14162 830 aa5.15□□□□□ -1.59
PTPRM-206ENST00000578093 TMC4Q7Z404 712 aa5.15□□□□□ -1.59
PTPRM-206ENST00000578093 CCDC146Q8IYE0 955 aa5.15□□□□□ -1.59
PTPRM-206ENST00000578093 CCDC116Q8IYX3 515 aa5.15□□□□□ -1.59
PTPRM-206ENST00000578093 PHTF2Q8N3S3 785 aa5.15□□□□□ -1.59
PTPRM-206ENST00000578093 PLBD2Q8NHP8 589 aa5.15□□□□□ -1.59
PTPRM-206ENST00000578093 JARID2Q92833 1246 aaPredicted RBP5.15□□□□□ -1.59
PTPRM-206ENST00000578093 CCDC85AQ96PX6 553 aaPredicted RBP5.15□□□□□ -1.59
PTPRM-206ENST00000578093 GMLQ99445 158 aa5.15□□□□□ -1.59
PTPRM-206ENST00000578093 SENP2Q9HC62 589 aa5.15□□□□□ -1.59
PTPRM-206ENST00000578093 PGPEP1Q9NXJ5 209 aa5.15□□□□□ -1.59
PTPRM-206ENST00000578093 TFIP11Q9UBB9 837 aaKnown RBP5.15□□□□□ -1.59
PTPRM-206ENST00000578093 DOLKQ9UPQ8 538 aa5.15□□□□□ -1.59
PTPRM-206ENST00000578093 LAMA3Q16787 3333 aa5.15□□□□□ -1.59
PTPRM-206ENST00000578093 KIAA0100Q14667 2235 aaKnown RBP5.15□□□□□ -1.59
PTPRM-206ENST00000578093 PALM3A6NDB9 673 aaPredicted RBP5.14□□□□□ -1.59
PTPRM-206ENST00000578093 SASH1O94885 1247 aa5.14□□□□□ -1.59
PTPRM-206ENST00000578093 NEFMP07197 916 aa5.14□□□□□ -1.59
PTPRM-206ENST00000578093 CAP1Q01518 475 aa5.14□□□□□ -1.59
PTPRM-206ENST00000578093 EML3Q32P44 896 aa5.14□□□□□ -1.59
PTPRM-206ENST00000578093 NBPF9Q3BBW0 867 aa5.14□□□□□ -1.59
PTPRM-206ENST00000578093 INTS6LQ5JSJ4 861 aaKnown RBP5.14□□□□□ -1.59
PTPRM-206ENST00000578093 TBC1D9Q6ZT07 1266 aa5.14□□□□□ -1.59
PTPRM-206ENST00000578093 PLPP7Q8NBV4 271 aa5.14□□□□□ -1.59
PTPRM-206ENST00000578093 UCN2Q96RP3 112 aa5.14□□□□□ -1.59
PTPRM-206ENST00000578093 EYA3Q99504 573 aa5.14□□□□□ -1.59
PTPRM-206ENST00000578093 PHAXQ9H814 394 aaKnown RBP5.14□□□□□ -1.59
PTPRM-206ENST00000578093 MYOZ2Q9NPC6 264 aa5.14□□□□□ -1.59
PTPRM-206ENST00000578093 TOR4AQ9NXH8 423 aa5.14□□□□□ -1.59
PTPRM-206ENST00000578093 PODXL2Q9NZ53 605 aa5.14□□□□□ -1.59
PTPRM-206ENST00000578093 PITPNM2Q9BZ72 1349 aa5.14□□□□□ -1.59
PTPRM-206ENST00000578093 USP17L5A8MUK1 530 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms