RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 CERS3Q8IU89 383 aa32.24■■■□□ 2.75
LIMD2-203ENST00000578067 TSPY26PQ9H489 355 aa32.24■■■□□ 2.75
LIMD2-203ENST00000578067 CCDC196A0A1B0GTZ2 297 aa32.24■■■□□ 2.75
LIMD2-203ENST00000578067 CYP2D6P10635 497 aa32.24■■■□□ 2.75
LIMD2-203ENST00000578067 SSRP1Q08945 709 aaKnown RBP32.24■■■□□ 2.75
LIMD2-203ENST00000578067 MPNDQ8N594 471 aa32.24■■■□□ 2.75
LIMD2-203ENST00000578067 GJB4Q9NTQ9 266 aa32.24■■■□□ 2.75
LIMD2-203ENST00000578067 FAM205AQ6ZU69 1335 aa32.23■■■□□ 2.75
LIMD2-203ENST00000578067 MFSD14BQ5SR56 506 aa32.23■■■□□ 2.75
LIMD2-203ENST00000578067 BRAPQ7Z569 592 aa32.23■■■□□ 2.75
LIMD2-203ENST00000578067 KLHL34Q8N239 644 aa32.23■■■□□ 2.75
LIMD2-203ENST00000578067 ENAHQ8N8S7 591 aaPredicted RBP32.23■■■□□ 2.75
LIMD2-203ENST00000578067 PGBD1Q96JS3 809 aa32.23■■■□□ 2.75
LIMD2-203ENST00000578067 USP28Q96RU2 1077 aa32.23■■■□□ 2.75
LIMD2-203ENST00000578067 RTFDC1Q9BY42 306 aaPredicted RBP32.23■■■□□ 2.75
LIMD2-203ENST00000578067 FMNL1O95466 1100 aaPredicted RBP32.22■■■□□ 2.75
LIMD2-203ENST00000578067 CEBPZQ03701 1054 aaKnown RBP32.22■■■□□ 2.75
LIMD2-203ENST00000578067 EVX2Q03828 476 aa32.22■■■□□ 2.75
LIMD2-203ENST00000578067 PDE4BQ07343 736 aa32.22■■■□□ 2.75
LIMD2-203ENST00000578067 FANCBQ8NB91 859 aa32.22■■■□□ 2.75
LIMD2-203ENST00000578067 AIFM3Q96NN9 605 aa32.22■■■□□ 2.75
LIMD2-203ENST00000578067 COA1Q9GZY4 146 aa32.22■■■□□ 2.75
LIMD2-203ENST00000578067 USP17L8P0C7I0 530 aa32.21■■■□□ 2.75
LIMD2-203ENST00000578067 SLC26A6Q9BXS9 759 aa32.21■■■□□ 2.75
LIMD2-203ENST00000578067 RIMBP2O15034 1052 aa32.21■■■□□ 2.75
LIMD2-203ENST00000578067 LIG1P18858 919 aa32.21■■■□□ 2.75
LIMD2-203ENST00000578067 PPP2R5BQ15173 497 aa32.21■■■□□ 2.75
LIMD2-203ENST00000578067 C12orf60Q5U649 245 aa32.21■■■□□ 2.75
LIMD2-203ENST00000578067 WASF1Q92558 559 aa32.21■■■□□ 2.75
LIMD2-203ENST00000578067 TMX4Q9H1E5 349 aaPredicted RBP32.21■■■□□ 2.75
LIMD2-203ENST00000578067 COL11A2P13942 1736 aaPredicted RBP32.2■■■□□ 2.75
LIMD2-203ENST00000578067 KIF23Q02241 960 aaPredicted RBP32.2■■■□□ 2.75
LIMD2-203ENST00000578067 SLC15A2Q16348 729 aa32.2■■■□□ 2.75
LIMD2-203ENST00000578067 IFIT1BQ5T764 474 aaKnown RBP32.2■■■□□ 2.75
LIMD2-203ENST00000578067 SLF2Q8IX21 1173 aa32.2■■■□□ 2.75
LIMD2-203ENST00000578067 NUP133Q8WUM0 1156 aa32.2■■■□□ 2.75
LIMD2-203ENST00000578067 FTOQ9C0B1 505 aaKnown RBP eCLIP32.2■■■□□ 2.75
LIMD2-203ENST00000578067 ZC3H12CQ9C0D7 883 aaKnown RBP32.2■■■□□ 2.75
LIMD2-203ENST00000578067 MYH2Q9UKX2 1941 aa32.19■■■□□ 2.74
LIMD2-203ENST00000578067 GPR75-ASB3A0A0A6YYF3 556 aa32.19■■■□□ 2.74
LIMD2-203ENST00000578067 EZH2Q15910 746 aaKnown RBP32.19■■■□□ 2.74
LIMD2-203ENST00000578067 KRT40Q6A162 431 aa32.19■■■□□ 2.74
LIMD2-203ENST00000578067 DPP8Q6V1X1 898 aaPredicted RBP32.19■■■□□ 2.74
LIMD2-203ENST00000578067 FAM163AQ96GL9 167 aaPredicted RBP32.19■■■□□ 2.74
LIMD2-203ENST00000578067 CAMKK2Q96RR4 588 aa32.19■■■□□ 2.74
LIMD2-203ENST00000578067 BTDP43251 543 aa32.19■■■□□ 2.74
LIMD2-203ENST00000578067 ANO8Q9HCE9 1232 aaPredicted RBP32.19■■■□□ 2.74
LIMD2-203ENST00000578067 OLFM4Q6UX06 510 aa32.18■■■□□ 2.74
LIMD2-203ENST00000578067 TRIM22Q8IYM9 498 aa32.18■■■□□ 2.74
LIMD2-203ENST00000578067 BICD2Q8TD16 824 aa32.18■■■□□ 2.74
LIMD2-203ENST00000578067 POLR3DP05423 398 aaPredicted RBP32.17■■■□□ 2.74
LIMD2-203ENST00000578067 NT5C2P49902 561 aa32.17■■■□□ 2.74
LIMD2-203ENST00000578067 GTF2IP78347 998 aa32.17■■■□□ 2.74
LIMD2-203ENST00000578067 EN1Q05925 392 aaPredicted RBP32.17■■■□□ 2.74
LIMD2-203ENST00000578067 TRIM29Q14134 588 aa32.17■■■□□ 2.74
LIMD2-203ENST00000578067 CATIPQ7Z7H3 387 aa32.17■■■□□ 2.74
LIMD2-203ENST00000578067 AMOTL1Q8IY63 956 aa32.17■■■□□ 2.74
LIMD2-203ENST00000578067 TGFBRAP1Q8WUH2 860 aa32.17■■■□□ 2.74
LIMD2-203ENST00000578067 ZNF622Q969S3 477 aaKnown RBP eCLIP32.17■■■□□ 2.74
LIMD2-203ENST00000578067 RTEL1Q9NZ71 1219 aa32.17■■■□□ 2.74
LIMD2-203ENST00000578067 KIF28PB7ZC32 967 aa32.17■■■□□ 2.74
LIMD2-203ENST00000578067 C2CD5Q86YS7 1000 aa32.17■■■□□ 2.74
LIMD2-203ENST00000578067 PLCG2P16885 1265 aa32.16■■■□□ 2.74
LIMD2-203ENST00000578067 MYSM1Q5VVJ2 828 aa32.16■■■□□ 2.74
LIMD2-203ENST00000578067 NBPF11Q86T75 865 aa32.16■■■□□ 2.74
LIMD2-203ENST00000578067 CRACR2BQ8N4Y2 399 aaPredicted RBP32.16■■■□□ 2.74
LIMD2-203ENST00000578067 ANP32BQ92688 251 aaKnown RBP32.16■■■□□ 2.74
LIMD2-203ENST00000578067 STK32BQ9NY57 414 aa32.16■■■□□ 2.74
LIMD2-203ENST00000578067 FAM47AQ5JRC9 791 aa32.15■■■□□ 2.74
LIMD2-203ENST00000578067 DDX19AQ9NUU7 478 aaKnown RBP32.15■■■□□ 2.74
LIMD2-203ENST00000578067 DLEC1Q9Y238 1755 aa32.15■■■□□ 2.74
LIMD2-203ENST00000578067 ROBO3Q96MS0 1386 aa32.15■■■□□ 2.74
LIMD2-203ENST00000578067 CALM1P0DP23 149 aa32.14■■■□□ 2.74
LIMD2-203ENST00000578067 CALM2P0DP24 149 aa32.14■■■□□ 2.74
LIMD2-203ENST00000578067 CALM3P0DP25 149 aa32.14■■■□□ 2.74
LIMD2-203ENST00000578067 NUP62CLQ9H1M0 184 aa32.14■■■□□ 2.74
LIMD2-203ENST00000578067 DACT1Q9NYF0 836 aa32.14■■■□□ 2.74
LIMD2-203ENST00000578067 ECM29Q5VYK3 1845 aa32.14■■■□□ 2.74
LIMD2-203ENST00000578067 GAKO14976 1311 aa32.14■■■□□ 2.74
LIMD2-203ENST00000578067 H0YIN7 160 aa32.14■■■□□ 2.74
LIMD2-203ENST00000578067 SLC4A8Q2Y0W8 1093 aa32.14■■■□□ 2.74
LIMD2-203ENST00000578067 STYK1Q6J9G0 422 aa32.14■■■□□ 2.74
LIMD2-203ENST00000578067 SUGT1Q9Y2Z0 365 aa32.14■■■□□ 2.74
LIMD2-203ENST00000578067 TSPY2A6NKD2 308 aa32.13■■■□□ 2.73
LIMD2-203ENST00000578067 DEXIO95424 95 aa32.13■■■□□ 2.73
LIMD2-203ENST00000578067 POLR3EQ9NVU0 708 aa32.13■■■□□ 2.73
LIMD2-203ENST00000578067 UBE2Q2LH0YL09 131 aa32.12■■■□□ 2.73
LIMD2-203ENST00000578067 DDAH1O94760 285 aa32.12■■■□□ 2.73
LIMD2-203ENST00000578067 MAPKAPK5Q8IW41 473 aa32.12■■■□□ 2.73
LIMD2-203ENST00000578067 TEX11Q8IYF3 940 aa32.12■■■□□ 2.73
LIMD2-203ENST00000578067 GUCY1A2P33402 732 aa32.12■■■□□ 2.73
LIMD2-203ENST00000578067 TROAPQ12815 778 aa32.12■■■□□ 2.73
LIMD2-203ENST00000578067 EYA3Q99504 573 aa32.12■■■□□ 2.73
LIMD2-203ENST00000578067 RBM28Q9NW13 759 aaKnown RBP32.12■■■□□ 2.73
LIMD2-203ENST00000578067 YEATS4O95619 227 aa32.11■■■□□ 2.73
LIMD2-203ENST00000578067 CMTR1Q8N1G2 835 aaKnown RBP32.11■■■□□ 2.73
LIMD2-203ENST00000578067 CCDC82Q8N4S0 544 aa32.11■■■□□ 2.73
LIMD2-203ENST00000578067 CLIC4Q9Y696 253 aa32.11■■■□□ 2.73
LIMD2-203ENST00000578067 NAV1Q8NEY1 1877 aa32.11■■■□□ 2.73
LIMD2-203ENST00000578067 NMT2O60551 498 aa32.1■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms