RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 TGFBRAP1Q8WUH2 860 aa16.6■□□□□ 0.25
CUEDC1-204ENST00000577497 NOL10Q9BSC4 688 aaKnown RBP16.6■□□□□ 0.25
CUEDC1-204ENST00000577497 BCL11AQ9H165 835 aa16.6■□□□□ 0.25
CUEDC1-204ENST00000577497 FLT1P17948 1338 aa16.6■□□□□ 0.25
CUEDC1-204ENST00000577497 PTPRFP10586 1907 aa16.6■□□□□ 0.25
CUEDC1-204ENST00000577497 TRIM75PA6NK02 468 aa16.59■□□□□ 0.25
CUEDC1-204ENST00000577497 CXCL11O14625 94 aa16.59■□□□□ 0.25
CUEDC1-204ENST00000577497 BAG3O95817 575 aa16.59■□□□□ 0.25
CUEDC1-204ENST00000577497 CYP2C8P10632 490 aa16.59■□□□□ 0.25
CUEDC1-204ENST00000577497 CYP7A1P22680 504 aa16.59■□□□□ 0.25
CUEDC1-204ENST00000577497 LACTBP83111 547 aaPredicted RBP16.59■□□□□ 0.25
CUEDC1-204ENST00000577497 MIGA1Q8NAN2 632 aa16.59■□□□□ 0.25
CUEDC1-204ENST00000577497 DNAJC18Q9H819 358 aa16.59■□□□□ 0.25
CUEDC1-204ENST00000577497 MKI67P46013 3256 aaKnown RBP16.59■□□□□ 0.25
CUEDC1-204ENST00000577497 ATAD5Q96QE3 1844 aa16.59■□□□□ 0.25
CUEDC1-204ENST00000577497 SHROOM1Q2M3G4 852 aaPredicted RBP16.58■□□□□ 0.24
CUEDC1-204ENST00000577497 SLC4A8Q2Y0W8 1093 aa16.58■□□□□ 0.24
CUEDC1-204ENST00000577497 HSP90AB4PQ58FF6 505 aa16.58■□□□□ 0.24
CUEDC1-204ENST00000577497 MAGEB6Q8N7X4 407 aa16.58■□□□□ 0.24
CUEDC1-204ENST00000577497 PTCH2Q9Y6C5 1203 aa16.58■□□□□ 0.24
CUEDC1-204ENST00000577497 PLCG2P16885 1265 aa16.57■□□□□ 0.24
CUEDC1-204ENST00000577497 JAG1P78504 1218 aa16.57■□□□□ 0.24
CUEDC1-204ENST00000577497 GADL1Q6ZQY3 521 aa16.57■□□□□ 0.24
CUEDC1-204ENST00000577497 KIF1BPQ96EK5 621 aa16.57■□□□□ 0.24
CUEDC1-204ENST00000577497 SAP30BPQ9UHR5 308 aaKnown RBP16.57■□□□□ 0.24
CUEDC1-204ENST00000577497 PALD1Q9ULE6 856 aa16.57■□□□□ 0.24
CUEDC1-204ENST00000577497 POTEFA5A3E0 1075 aa16.56■□□□□ 0.24
CUEDC1-204ENST00000577497 HMMRO75330 724 aa16.56■□□□□ 0.24
CUEDC1-204ENST00000577497 CAP2P40123 477 aa16.56■□□□□ 0.24
CUEDC1-204ENST00000577497 PDE3AQ14432 1141 aa16.56■□□□□ 0.24
CUEDC1-204ENST00000577497 CLASRPQ8N2M8 674 aaKnown RBP16.56■□□□□ 0.24
CUEDC1-204ENST00000577497 ARMC5Q96C12 935 aa16.56■□□□□ 0.24
CUEDC1-204ENST00000577497 PARK7Q99497 189 aaKnown RBP16.56■□□□□ 0.24
CUEDC1-204ENST00000577497 PI4KBQ9UBF8 816 aa16.56■□□□□ 0.24
CUEDC1-204ENST00000577497 TREML2Q5T2D2 321 aa16.55■□□□□ 0.24
CUEDC1-204ENST00000577497 FASTKD5Q7L8L6 764 aaKnown RBP16.55■□□□□ 0.24
CUEDC1-204ENST00000577497 EDC3Q96F86 508 aaKnown RBP16.55■□□□□ 0.24
CUEDC1-204ENST00000577497 TRIM47Q96LD4 638 aa16.55■□□□□ 0.24
CUEDC1-204ENST00000577497 DHX36Q9H2U1 1008 aaKnown RBP16.55■□□□□ 0.24
CUEDC1-204ENST00000577497 HERC5Q9UII4 1024 aaKnown RBP16.55■□□□□ 0.24
CUEDC1-204ENST00000577497 LOC285556D6RIA3 1793 aa16.54■□□□□ 0.24
CUEDC1-204ENST00000577497 DDX60LQ5H9U9 1706 aaKnown RBP16.54■□□□□ 0.24
CUEDC1-204ENST00000577497 IGSF3O75054 1194 aa16.54■□□□□ 0.24
CUEDC1-204ENST00000577497 IFIT2P09913 472 aaKnown RBP16.54■□□□□ 0.24
CUEDC1-204ENST00000577497 BCRP11274 1271 aa16.54■□□□□ 0.24
CUEDC1-204ENST00000577497 MAP3K12Q12852 859 aa16.54■□□□□ 0.24
CUEDC1-204ENST00000577497 SPP2Q13103 211 aa16.54■□□□□ 0.24
CUEDC1-204ENST00000577497 DNAJC2Q99543 621 aaKnown RBP16.54■□□□□ 0.24
CUEDC1-204ENST00000577497 GOLIM4O00461 696 aa16.53■□□□□ 0.24
CUEDC1-204ENST00000577497 RAB11FIP3O75154 756 aa16.53■□□□□ 0.24
CUEDC1-204ENST00000577497 GDF11O95390 407 aa16.53■□□□□ 0.24
CUEDC1-204ENST00000577497 PSMC4P43686 418 aa16.53■□□□□ 0.24
CUEDC1-204ENST00000577497 KIF22Q14807 665 aa16.53■□□□□ 0.24
CUEDC1-204ENST00000577497 METTL16Q86W50 562 aaKnown RBP16.53■□□□□ 0.24
CUEDC1-204ENST00000577497 ZNF333Q96JL9 665 aa16.53■□□□□ 0.24
CUEDC1-204ENST00000577497 RIOK1Q9BRS2 568 aaKnown RBP16.53■□□□□ 0.24
CUEDC1-204ENST00000577497 AGTPBP1Q9UPW5 1226 aa16.53■□□□□ 0.24
CUEDC1-204ENST00000577497 RBBP6Q7Z6E9 1792 aaKnown RBP16.53■□□□□ 0.24
CUEDC1-204ENST00000577497 SMARCA5O60264 1052 aaPredicted RBP16.52■□□□□ 0.24
CUEDC1-204ENST00000577497 MYCP01106 439 aaPredicted RBP16.52■□□□□ 0.24
CUEDC1-204ENST00000577497 PDE6AP16499 860 aa16.52■□□□□ 0.24
CUEDC1-204ENST00000577497 OSBPP22059 807 aa16.52■□□□□ 0.24
CUEDC1-204ENST00000577497 HMGCS2P54868 508 aa16.52■□□□□ 0.24
CUEDC1-204ENST00000577497 ARHGEF6Q15052 776 aa16.52■□□□□ 0.24
CUEDC1-204ENST00000577497 SLFNL1Q499Z3 407 aa16.52■□□□□ 0.24
CUEDC1-204ENST00000577497 SLC9C1Q4G0N8 1177 aa16.52■□□□□ 0.24
CUEDC1-204ENST00000577497 CRACR2BQ8N4Y2 399 aaPredicted RBP16.52■□□□□ 0.24
CUEDC1-204ENST00000577497 ZNF280CQ8ND82 737 aa16.52■□□□□ 0.24
CUEDC1-204ENST00000577497 SH3TC2Q8TF17 1288 aa16.52■□□□□ 0.24
CUEDC1-204ENST00000577497 CHMP4BQ9H444 224 aaKnown RBP16.52■□□□□ 0.24
CUEDC1-204ENST00000577497 SLC45A1Q9Y2W3 748 aa16.52■□□□□ 0.24
CUEDC1-204ENST00000577497 MYH1P12882 1939 aa16.51■□□□□ 0.23
CUEDC1-204ENST00000577497 USP17L5A8MUK1 530 aa16.51■□□□□ 0.23
CUEDC1-204ENST00000577497 CHGBP05060 677 aa16.51■□□□□ 0.23
CUEDC1-204ENST00000577497 USP5P45974 858 aa16.51■□□□□ 0.23
CUEDC1-204ENST00000577497 EVX2Q03828 476 aa16.51■□□□□ 0.23
CUEDC1-204ENST00000577497 SLC9C2Q5TAH2 1124 aa16.51■□□□□ 0.23
CUEDC1-204ENST00000577497 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.51■□□□□ 0.23
CUEDC1-204ENST00000577497 ZNF532Q9HCE3 1301 aa16.5■□□□□ 0.23
CUEDC1-204ENST00000577497 TCRBV5S4A2TA0A5A2 114 aa16.5■□□□□ 0.23
CUEDC1-204ENST00000577497 FMNL1O95466 1100 aaPredicted RBP16.5■□□□□ 0.23
CUEDC1-204ENST00000577497 MTMR2Q13614 643 aa16.5■□□□□ 0.23
CUEDC1-204ENST00000577497 TTF1Q15361 905 aaPredicted RBP16.5■□□□□ 0.23
CUEDC1-204ENST00000577497 FOXP4Q8IVH2 680 aaPredicted RBP16.5■□□□□ 0.23
CUEDC1-204ENST00000577497 PROCA1Q8NCQ7 364 aaPredicted RBP16.5■□□□□ 0.23
CUEDC1-204ENST00000577497 SMCR8Q8TEV9 937 aaPredicted RBP16.5■□□□□ 0.23
CUEDC1-204ENST00000577497 BOLA2Q9H3K6 86 aa16.5■□□□□ 0.23
CUEDC1-204ENST00000577497 SRRDQ9UH36 339 aa16.5■□□□□ 0.23
CUEDC1-204ENST00000577497 ZBTB21Q9ULJ3 1066 aa16.5■□□□□ 0.23
CUEDC1-204ENST00000577497 NAV1Q8NEY1 1877 aa16.5■□□□□ 0.23
CUEDC1-204ENST00000577497 MAGEB6P1A0A0J9YX57 407 aa16.49■□□□□ 0.23
CUEDC1-204ENST00000577497 MGAMO43451 1857 aa16.49■□□□□ 0.23
CUEDC1-204ENST00000577497 GNRH1P01148 92 aa16.49■□□□□ 0.23
CUEDC1-204ENST00000577497 HLA-DOAP06340 250 aa16.49■□□□□ 0.23
CUEDC1-204ENST00000577497 EN2P19622 333 aaPredicted RBP16.49■□□□□ 0.23
CUEDC1-204ENST00000577497 PRKCZQ05513 592 aa16.49■□□□□ 0.23
CUEDC1-204ENST00000577497 TRIM34Q9BYJ4 488 aa16.49■□□□□ 0.23
CUEDC1-204ENST00000577497 LRRCC1Q9C099 1032 aa16.49■□□□□ 0.23
CUEDC1-204ENST00000577497 MYPNQ86TC9 1320 aa16.48■□□□□ 0.23
CUEDC1-204ENST00000577497 ASNSP08243 561 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms