RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 ERICH6Q7L0X2 663 aa16.54■□□□□ 0.24
COPS3-214ENST00000577246 DIS3LQ8TF46 1054 aaKnown RBP16.54■□□□□ 0.24
COPS3-214ENST00000577246 C11orf49Q9H6J7 331 aa16.54■□□□□ 0.24
COPS3-214ENST00000577246 DOCK1Q14185 1865 aa16.54■□□□□ 0.24
COPS3-214ENST00000577246 COL2A1P02458 1487 aaPredicted RBP16.54■□□□□ 0.24
COPS3-214ENST00000577246 LRIT3Q3SXY7 679 aa16.53■□□□□ 0.24
COPS3-214ENST00000577246 TRMT44Q8IYL2 757 aaKnown RBP16.53■□□□□ 0.24
COPS3-214ENST00000577246 DEFB123Q8N688 67 aa16.53■□□□□ 0.24
COPS3-214ENST00000577246 COPRSQ9NQ92 184 aa16.53■□□□□ 0.24
COPS3-214ENST00000577246 SMC4Q9NTJ3 1288 aa16.53■□□□□ 0.24
COPS3-214ENST00000577246 ZMYND8Q9ULU4 1186 aaPredicted RBP16.53■□□□□ 0.24
COPS3-214ENST00000577246 USP17L5A8MUK1 530 aa16.52■□□□□ 0.24
COPS3-214ENST00000577246 ADORA1P30542 326 aa16.52■□□□□ 0.24
COPS3-214ENST00000577246 HMGCS2P54868 508 aa16.52■□□□□ 0.24
COPS3-214ENST00000577246 RHBDL3P58872 404 aa16.52■□□□□ 0.24
COPS3-214ENST00000577246 MECOMQ03112 1051 aa16.52■□□□□ 0.24
COPS3-214ENST00000577246 CCDC84Q86UT8 332 aaPredicted RBP16.52■□□□□ 0.24
COPS3-214ENST00000577246 TDHQ8IZJ6 230 aa16.52■□□□□ 0.24
COPS3-214ENST00000577246 SOCS4Q8WXH5 440 aa16.52■□□□□ 0.24
COPS3-214ENST00000577246 ASCC2Q9H1I8 757 aaPredicted RBP16.52■□□□□ 0.24
COPS3-214ENST00000577246 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.52■□□□□ 0.24
COPS3-214ENST00000577246 HERC5Q9UII4 1024 aaKnown RBP16.52■□□□□ 0.24
COPS3-214ENST00000577246 CAP2P40123 477 aa16.51■□□□□ 0.23
COPS3-214ENST00000577246 IRX3P78415 501 aaPredicted RBP16.51■□□□□ 0.23
COPS3-214ENST00000577246 SH3D19Q5HYK7 790 aa16.51■□□□□ 0.23
COPS3-214ENST00000577246 MORF4L1Q9UBU8 362 aa16.51■□□□□ 0.23
COPS3-214ENST00000577246 GJD2Q9UKL4 321 aa16.51■□□□□ 0.23
COPS3-214ENST00000577246 OGDHLQ9ULD0 1010 aa16.51■□□□□ 0.23
COPS3-214ENST00000577246 STXBP5LQ9Y2K9 1186 aa16.51■□□□□ 0.23
COPS3-214ENST00000577246 LAMA3Q16787 3333 aa16.5■□□□□ 0.23
COPS3-214ENST00000577246 A0A1B0GUL7 405 aa16.5■□□□□ 0.23
COPS3-214ENST00000577246 XRCC5P13010 732 aaKnown RBP16.5■□□□□ 0.23
COPS3-214ENST00000577246 MAGEA10P43363 369 aaPredicted RBP16.5■□□□□ 0.23
COPS3-214ENST00000577246 PDE3AQ14432 1141 aa16.5■□□□□ 0.23
COPS3-214ENST00000577246 XAGE2Q96GT9 111 aa16.5■□□□□ 0.23
COPS3-214ENST00000577246 NUDT12Q9BQG2 462 aa16.5■□□□□ 0.23
COPS3-214ENST00000577246 NOL10Q9BSC4 688 aaKnown RBP16.5■□□□□ 0.23
COPS3-214ENST00000577246 TMOD4Q9NZQ9 345 aa16.5■□□□□ 0.23
COPS3-214ENST00000577246 PA2G4Q9UQ80 394 aaKnown RBP16.5■□□□□ 0.23
COPS3-214ENST00000577246 FAM196BA6NMK8 535 aa16.49■□□□□ 0.23
COPS3-214ENST00000577246 SLURP2P0DP57 97 aa16.49■□□□□ 0.23
COPS3-214ENST00000577246 TIMM10P62072 90 aa16.49■□□□□ 0.23
COPS3-214ENST00000577246 GORABQ5T7V8 394 aa16.49■□□□□ 0.23
COPS3-214ENST00000577246 CCAR1Q8IX12 1150 aaKnown RBP16.49■□□□□ 0.23
COPS3-214ENST00000577246 GTF3C2Q8WUA4 911 aaPredicted RBP16.49■□□□□ 0.23
COPS3-214ENST00000577246 API5Q9BZZ5 524 aaKnown RBP16.49■□□□□ 0.23
COPS3-214ENST00000577246 UBE2OQ9C0C9 1292 aaKnown RBP16.49■□□□□ 0.23
COPS3-214ENST00000577246 DHX36Q9H2U1 1008 aaKnown RBP16.49■□□□□ 0.23
COPS3-214ENST00000577246 PTPRFP10586 1907 aa16.49■□□□□ 0.23
COPS3-214ENST00000577246 MYH2Q9UKX2 1941 aa16.49■□□□□ 0.23
COPS3-214ENST00000577246 ASNSP08243 561 aa16.48■□□□□ 0.23
COPS3-214ENST00000577246 PRKAR2AP13861 404 aaKnown RBP16.48■□□□□ 0.23
COPS3-214ENST00000577246 SYN1P17600 705 aa16.48■□□□□ 0.23
COPS3-214ENST00000577246 MAPK4P31152 587 aa16.48■□□□□ 0.23
COPS3-214ENST00000577246 MAP3K21Q5TCX8 1036 aa16.48■□□□□ 0.23
COPS3-214ENST00000577246 SPATA5Q8NB90 893 aa16.48■□□□□ 0.23
COPS3-214ENST00000577246 GPRC5AQ8NFJ5 357 aa16.48■□□□□ 0.23
COPS3-214ENST00000577246 TRIB2Q92519 343 aa16.48■□□□□ 0.23
COPS3-214ENST00000577246 NSUN4Q96CB9 384 aaKnown RBP16.48■□□□□ 0.23
COPS3-214ENST00000577246 WDR18Q9BV38 432 aa16.48■□□□□ 0.23
COPS3-214ENST00000577246 GINM1Q9NU53 330 aa16.48■□□□□ 0.23
COPS3-214ENST00000577246 PI4KBQ9UBF8 816 aa16.48■□□□□ 0.23
COPS3-214ENST00000577246 LOC285556D6RIA3 1793 aa16.48■□□□□ 0.23
COPS3-214ENST00000577246 PHIPQ8WWQ0 1821 aa16.47■□□□□ 0.23
COPS3-214ENST00000577246 C19orf81C9J6K1 198 aa16.47■□□□□ 0.23
COPS3-214ENST00000577246 CT47B1P0C2W7 299 aaPredicted RBP16.47■□□□□ 0.23
COPS3-214ENST00000577246 PLCG2P16885 1265 aa16.47■□□□□ 0.23
COPS3-214ENST00000577246 ZKSCAN1P17029 563 aaPredicted RBP16.47■□□□□ 0.23
COPS3-214ENST00000577246 CYP2B6P20813 491 aa16.47■□□□□ 0.23
COPS3-214ENST00000577246 HOXA7P31268 230 aaPredicted RBP16.47■□□□□ 0.23
COPS3-214ENST00000577246 BACE1P56817 501 aa16.47■□□□□ 0.23
COPS3-214ENST00000577246 SLFN5Q08AF3 891 aa16.47■□□□□ 0.23
COPS3-214ENST00000577246 TRIM32Q13049 653 aa16.47■□□□□ 0.23
COPS3-214ENST00000577246 MTMR2Q13614 643 aa16.47■□□□□ 0.23
COPS3-214ENST00000577246 TEX11Q8IYF3 940 aa16.47■□□□□ 0.23
COPS3-214ENST00000577246 NEUROD6Q96NK8 337 aa16.47■□□□□ 0.23
COPS3-214ENST00000577246 TRIM34Q9BYJ4 488 aa16.47■□□□□ 0.23
COPS3-214ENST00000577246 RAI14Q9P0K7 980 aa16.47■□□□□ 0.23
COPS3-214ENST00000577246 SRGAP3O43295 1099 aa16.46■□□□□ 0.23
COPS3-214ENST00000577246 BAG3O95817 575 aa16.46■□□□□ 0.23
COPS3-214ENST00000577246 GNAI3P08754 354 aa16.46■□□□□ 0.23
COPS3-214ENST00000577246 TFCP2Q12800 502 aa16.46■□□□□ 0.23
COPS3-214ENST00000577246 MTMR10Q9NXD2 777 aa16.46■□□□□ 0.23
COPS3-214ENST00000577246 HMG20BQ9P0W2 317 aa16.46■□□□□ 0.23
COPS3-214ENST00000577246 COL6A3P12111 3177 aa16.45■□□□□ 0.22
COPS3-214ENST00000577246 RGS2P41220 211 aa16.45■□□□□ 0.22
COPS3-214ENST00000577246 HERVK_113P62684 666 aa16.45■□□□□ 0.22
COPS3-214ENST00000577246 Q7L0L9 218 aa16.45■□□□□ 0.22
COPS3-214ENST00000577246 ZNF384Q8TF68 577 aa16.45■□□□□ 0.22
COPS3-214ENST00000577246 CWC22Q9HCG8 908 aaKnown RBP16.45■□□□□ 0.22
COPS3-214ENST00000577246 LRP2BPQ9P2M1 347 aa16.45■□□□□ 0.22
COPS3-214ENST00000577246 NOB1Q9ULX3 412 aaKnown RBP16.45■□□□□ 0.22
COPS3-214ENST00000577246 PFASO15067 1338 aa16.45■□□□□ 0.22
COPS3-214ENST00000577246 USP17L10C9JJH3 530 aa16.44■□□□□ 0.22
COPS3-214ENST00000577246 UQCRFS1P1P0C7P4 283 aa16.44■□□□□ 0.22
COPS3-214ENST00000577246 ARID4AP29374 1257 aaPredicted RBP16.44■□□□□ 0.22
COPS3-214ENST00000577246 CRACR2BQ8N4Y2 399 aaPredicted RBP16.44■□□□□ 0.22
COPS3-214ENST00000577246 P2RX7Q99572 595 aaKnown RBP16.44■□□□□ 0.22
COPS3-214ENST00000577246 MEIS3Q99687 375 aa16.44■□□□□ 0.22
COPS3-214ENST00000577246 APBA2Q99767 749 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms