RNA–Protein interactions for RNA: ENST00000577101.5

NDE1-212, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-212ENST00000577101 CTR9Q6PD62 1173 aa11.78□□□□□ -0.52
NDE1-212ENST00000577101 ZKSCAN4Q969J2 545 aaPredicted RBP11.78□□□□□ -0.52
NDE1-212ENST00000577101 AIDAQ96BJ3 306 aa11.78□□□□□ -0.52
NDE1-212ENST00000577101 HHIPL1Q96JK4 782 aa11.78□□□□□ -0.52
NDE1-212ENST00000577101 CRNKL1Q9BZJ0 848 aaKnown RBP11.78□□□□□ -0.52
NDE1-212ENST00000577101 SLC4A4Q9Y6R1 1079 aa11.78□□□□□ -0.52
NDE1-212ENST00000577101 TBC1D12O60347 775 aa11.77□□□□□ -0.53
NDE1-212ENST00000577101 SLC10A3P09131 477 aa11.77□□□□□ -0.53
NDE1-212ENST00000577101 CHMLP26374 656 aa11.77□□□□□ -0.53
NDE1-212ENST00000577101 VGLL4Q14135 290 aa11.77□□□□□ -0.53
NDE1-212ENST00000577101 CCDC84Q86UT8 332 aaPredicted RBP11.77□□□□□ -0.53
NDE1-212ENST00000577101 CERS3Q8IU89 383 aa11.77□□□□□ -0.53
NDE1-212ENST00000577101 ZSCAN29Q8IWY8 852 aaPredicted RBP11.77□□□□□ -0.53
NDE1-212ENST00000577101 SLC44A5Q8NCS7 719 aa11.77□□□□□ -0.53
NDE1-212ENST00000577101 NKX2-3Q8TAU0 364 aa11.77□□□□□ -0.53
NDE1-212ENST00000577101 DYNLL2Q96FJ2 89 aa11.77□□□□□ -0.53
NDE1-212ENST00000577101 HELLSQ9NRZ9 838 aa11.77□□□□□ -0.53
NDE1-212ENST00000577101 USP17L12C9JPN9 530 aa11.76□□□□□ -0.53
NDE1-212ENST00000577101 USP17L21D6R901 530 aa11.76□□□□□ -0.53
NDE1-212ENST00000577101 SHMT1P34896 483 aa11.76□□□□□ -0.53
NDE1-212ENST00000577101 NF2P35240 595 aa11.76□□□□□ -0.53
NDE1-212ENST00000577101 TTLL12Q14166 644 aaPredicted RBP11.76□□□□□ -0.53
NDE1-212ENST00000577101 MCMDC2Q4G0Z9 681 aa11.76□□□□□ -0.53
NDE1-212ENST00000577101 C12orf60Q5U649 245 aa11.76□□□□□ -0.53
NDE1-212ENST00000577101 CWC27Q6UX04 472 aaKnown RBP11.76□□□□□ -0.53
NDE1-212ENST00000577101 ARMC9Q7Z3E5 817 aa11.76□□□□□ -0.53
NDE1-212ENST00000577101 TICAM2Q86XR7 235 aa11.76□□□□□ -0.53
NDE1-212ENST00000577101 IFNL3Q8IZI9 196 aa11.76□□□□□ -0.53
NDE1-212ENST00000577101 PIAS4Q8N2W9 510 aaPredicted RBP11.76□□□□□ -0.53
NDE1-212ENST00000577101 CAPNS2Q96L46 248 aa11.76□□□□□ -0.53
NDE1-212ENST00000577101 WRNIP1Q96S55 665 aa11.76□□□□□ -0.53
NDE1-212ENST00000577101 ZNF341Q9BYN7 854 aa11.76□□□□□ -0.53
NDE1-212ENST00000577101 ELP3Q9H9T3 547 aa11.76□□□□□ -0.53
NDE1-212ENST00000577101 ATP8A2Q9NTI2 1148 aa11.76□□□□□ -0.53
NDE1-212ENST00000577101 MCM9Q9NXL9 1143 aa11.76□□□□□ -0.53
NDE1-212ENST00000577101 WDR33Q9C0J8 1336 aaKnown RBP11.76□□□□□ -0.53
NDE1-212ENST00000577101 LOC285556D6RIA3 1793 aa11.76□□□□□ -0.53
NDE1-212ENST00000577101 PATL2C9JE40 543 aaKnown RBP11.75□□□□□ -0.53
NDE1-212ENST00000577101 PPP1R12BO60237 982 aaPredicted RBP11.75□□□□□ -0.53
NDE1-212ENST00000577101 HSPD1P10809 573 aaKnown RBP11.75□□□□□ -0.53
NDE1-212ENST00000577101 MAP3K9P80192 1104 aa11.75□□□□□ -0.53
NDE1-212ENST00000577101 SBK1Q52WX2 424 aa11.75□□□□□ -0.53
NDE1-212ENST00000577101 BMP2KLQ5H9B9 411 aa11.75□□□□□ -0.53
NDE1-212ENST00000577101 NOL9Q5SY16 702 aaKnown RBP11.75□□□□□ -0.53
NDE1-212ENST00000577101 TATDN1Q6P1N9 297 aa11.75□□□□□ -0.53
NDE1-212ENST00000577101 ANKRD13AQ8IZ07 590 aa11.75□□□□□ -0.53
NDE1-212ENST00000577101 WNK4Q96J92 1243 aa11.75□□□□□ -0.53
NDE1-212ENST00000577101 NBPF3Q9H094 633 aa11.75□□□□□ -0.53
NDE1-212ENST00000577101 EHD4Q9H223 541 aa11.75□□□□□ -0.53
NDE1-212ENST00000577101 DHX36Q9H2U1 1008 aaKnown RBP11.75□□□□□ -0.53
NDE1-212ENST00000577101 PI4KBQ9UBF8 816 aa11.75□□□□□ -0.53
NDE1-212ENST00000577101 CCDC171Q6TFL3 1326 aa11.75□□□□□ -0.53
NDE1-212ENST00000577101 ROBO3Q96MS0 1386 aa11.75□□□□□ -0.53
NDE1-212ENST00000577101 CEP350Q5VT06 3117 aa11.74□□□□□ -0.53
NDE1-212ENST00000577101 GUCY1A2P33402 732 aa11.74□□□□□ -0.53
NDE1-212ENST00000577101 IREB2P48200 963 aaKnown RBP11.74□□□□□ -0.53
NDE1-212ENST00000577101 ZNF157P51786 506 aaPredicted RBP11.74□□□□□ -0.53
NDE1-212ENST00000577101 MKRN3Q13064 507 aaKnown RBP11.74□□□□□ -0.53
NDE1-212ENST00000577101 SPRYD7Q5W111 196 aa11.74□□□□□ -0.53
NDE1-212ENST00000577101 DCAF15Q66K64 600 aa11.74□□□□□ -0.53
NDE1-212ENST00000577101 JMYQ8N9B5 988 aa11.74□□□□□ -0.53
NDE1-212ENST00000577101 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.74□□□□□ -0.53
NDE1-212ENST00000577101 INCENPQ9NQS7 918 aa11.74□□□□□ -0.53
NDE1-212ENST00000577101 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.74□□□□□ -0.53
NDE1-212ENST00000577101 SPDYE5A6NIY4 337 aa11.73□□□□□ -0.53
NDE1-212ENST00000577101 GDF11O95390 407 aa11.73□□□□□ -0.53
NDE1-212ENST00000577101 CAP2P40123 477 aa11.73□□□□□ -0.53
NDE1-212ENST00000577101 PTH1RQ03431 593 aa11.73□□□□□ -0.53
NDE1-212ENST00000577101 GRM1Q13255 1194 aa11.73□□□□□ -0.53
NDE1-212ENST00000577101 MOGSQ13724 837 aa11.73□□□□□ -0.53
NDE1-212ENST00000577101 LRRFIP1Q32MZ4 808 aaKnown RBP11.73□□□□□ -0.53
NDE1-212ENST00000577101 GIMAP6Q6P9H5 292 aa11.73□□□□□ -0.53
NDE1-212ENST00000577101 FOXP4Q8IVH2 680 aaPredicted RBP11.73□□□□□ -0.53
NDE1-212ENST00000577101 SCYL3Q8IZE3 742 aa11.73□□□□□ -0.53
NDE1-212ENST00000577101 OPTNQ96CV9 577 aa11.73□□□□□ -0.53
NDE1-212ENST00000577101 MS4A4AQ96JQ5 239 aa11.73□□□□□ -0.53
NDE1-212ENST00000577101 HERC5Q9UII4 1024 aaKnown RBP11.73□□□□□ -0.53
NDE1-212ENST00000577101 SERPINB13Q9UIV8 391 aa11.73□□□□□ -0.53
NDE1-212ENST00000577101 MYH4Q9Y623 1939 aa11.72□□□□□ -0.53
NDE1-212ENST00000577101 PARP14Q460N5 1801 aa11.72□□□□□ -0.53
NDE1-212ENST00000577101 UNCXA6NJT0 531 aa11.72□□□□□ -0.53
NDE1-212ENST00000577101 SGSM2O43147 1006 aa11.72□□□□□ -0.53
NDE1-212ENST00000577101 FGAP02671 866 aa11.72□□□□□ -0.53
NDE1-212ENST00000577101 POLR3DP05423 398 aaPredicted RBP11.72□□□□□ -0.53
NDE1-212ENST00000577101 PTPRAP18433 802 aa11.72□□□□□ -0.53
NDE1-212ENST00000577101 GNAT2P19087 354 aa11.72□□□□□ -0.53
NDE1-212ENST00000577101 KIF23Q02241 960 aaPredicted RBP11.72□□□□□ -0.53
NDE1-212ENST00000577101 DGKZQ13574 1117 aa11.72□□□□□ -0.53
NDE1-212ENST00000577101 ALX1Q15699 326 aa11.72□□□□□ -0.53
NDE1-212ENST00000577101 C16orf86Q6ZW13 317 aa11.72□□□□□ -0.53
NDE1-212ENST00000577101 TTC6Q86TZ1 520 aa11.72□□□□□ -0.53
NDE1-212ENST00000577101 STK11IPQ8N1F8 1099 aa11.72□□□□□ -0.53
NDE1-212ENST00000577101 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.72□□□□□ -0.53
NDE1-212ENST00000577101 DIAPH3Q9NSV4 1193 aa11.72□□□□□ -0.53
NDE1-212ENST00000577101 ARPP21Q9UBL0 812 aaPredicted RBP11.72□□□□□ -0.53
NDE1-212ENST00000577101 IRF6O14896 467 aa11.71□□□□□ -0.53
NDE1-212ENST00000577101 CTNND1O60716 968 aaKnown RBP11.71□□□□□ -0.53
NDE1-212ENST00000577101 HLA-DOAP06340 250 aa11.71□□□□□ -0.53
NDE1-212ENST00000577101 AKR1B1P15121 316 aa11.71□□□□□ -0.53
NDE1-212ENST00000577101 CDK8P49336 464 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms