RNA–Protein interactions for RNA: ENST00000576360.1

CHRNB1-208, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNB1, Length 1,837 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-208ENST00000576360 ERFEQ4G0M1 354 aa12.33□□□□□ -0.44
CHRNB1-208ENST00000576360 FOXR1Q6PIV2 292 aa12.33□□□□□ -0.44
CHRNB1-208ENST00000576360 CWC27Q6UX04 472 aaKnown RBP12.33□□□□□ -0.44
CHRNB1-208ENST00000576360 KIAA1328Q86T90 577 aa12.33□□□□□ -0.44
CHRNB1-208ENST00000576360 TRIM74Q86UV6 250 aa12.33□□□□□ -0.44
CHRNB1-208ENST00000576360 TRIM73Q86UV7 250 aa12.33□□□□□ -0.44
CHRNB1-208ENST00000576360 TRIM5Q9C035 493 aa12.33□□□□□ -0.44
CHRNB1-208ENST00000576360 BATF3Q9NR55 127 aa12.33□□□□□ -0.44
CHRNB1-208ENST00000576360 NRBP1Q9UHY1 535 aa12.33□□□□□ -0.44
CHRNB1-208ENST00000576360 DNAI1Q9UI46 699 aa12.33□□□□□ -0.44
CHRNB1-208ENST00000576360 ODF2LQ9ULJ1 636 aa12.33□□□□□ -0.44
CHRNB1-208ENST00000576360 DICER1Q9UPY3 1922 aaKnown RBP12.33□□□□□ -0.44
CHRNB1-208ENST00000576360 SCN4AP35499 1836 aa12.32□□□□□ -0.44
CHRNB1-208ENST00000576360 ABCD1P33897 745 aa12.32□□□□□ -0.44
CHRNB1-208ENST00000576360 ECE1P42892 770 aa12.32□□□□□ -0.44
CHRNB1-208ENST00000576360 CCNHP51946 323 aaPredicted RBP12.32□□□□□ -0.44
CHRNB1-208ENST00000576360 CPLX2Q6PUV4 134 aaKnown RBP12.32□□□□□ -0.44
CHRNB1-208ENST00000576360 TTLL7Q6ZT98 887 aa12.32□□□□□ -0.44
CHRNB1-208ENST00000576360 RPAP2Q8IXW5 612 aaPredicted RBP12.32□□□□□ -0.44
CHRNB1-208ENST00000576360 FAM71BQ8TC56 605 aa12.32□□□□□ -0.44
CHRNB1-208ENST00000576360 RABGGTAQ92696 567 aa12.32□□□□□ -0.44
CHRNB1-208ENST00000576360 MMTAG2Q9BU76 263 aaKnown RBP12.32□□□□□ -0.44
CHRNB1-208ENST00000576360 LNPKQ9C0E8 428 aa12.32□□□□□ -0.44
CHRNB1-208ENST00000576360 SLC24A3Q9HC58 644 aa12.32□□□□□ -0.44
CHRNB1-208ENST00000576360 THSD7BQ9C0I4 1608 aa12.32□□□□□ -0.44
CHRNB1-208ENST00000576360 USP27XA6NNY8 438 aa12.32□□□□□ -0.44
CHRNB1-208ENST00000576360 H0YIN7 160 aa12.32□□□□□ -0.44
CHRNB1-208ENST00000576360 H3BQF6 201 aa12.32□□□□□ -0.44
CHRNB1-208ENST00000576360 SOGA3Q5TF21 947 aa12.32□□□□□ -0.44
CHRNB1-208ENST00000576360 RBM12BQ8IXT5 1001 aaKnown RBP12.32□□□□□ -0.44
CHRNB1-208ENST00000576360 MICAL1Q8TDZ2 1067 aa12.32□□□□□ -0.44
CHRNB1-208ENST00000576360 XAGE2Q96GT9 111 aa12.32□□□□□ -0.44
CHRNB1-208ENST00000576360 NRXN2Q9P2S2 1712 aa12.31□□□□□ -0.44
CHRNB1-208ENST00000576360 NPHP1O15259 732 aa12.31□□□□□ -0.44
CHRNB1-208ENST00000576360 SMARCA5O60264 1052 aaPredicted RBP12.31□□□□□ -0.44
CHRNB1-208ENST00000576360 FAM163BP0C2L3 166 aa12.31□□□□□ -0.44
CHRNB1-208ENST00000576360 CCZ1BP86790 482 aa12.31□□□□□ -0.44
CHRNB1-208ENST00000576360 CCZ1P86791 482 aaPredicted RBP12.31□□□□□ -0.44
CHRNB1-208ENST00000576360 GIMAP6Q6P9H5 292 aa12.31□□□□□ -0.44
CHRNB1-208ENST00000576360 PNMA8AQ86V59 439 aaPredicted RBP12.31□□□□□ -0.44
CHRNB1-208ENST00000576360 MAB21L3Q8N8X9 362 aa12.31□□□□□ -0.44
CHRNB1-208ENST00000576360 ZKSCAN4Q969J2 545 aaPredicted RBP12.31□□□□□ -0.44
CHRNB1-208ENST00000576360 KDM4CQ9H3R0 1056 aa12.31□□□□□ -0.44
CHRNB1-208ENST00000576360 F6X3S4 739 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 ERC2O15083 957 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 ZPR1O75312 459 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 CDKL5O76039 1030 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 SEC31AO94979 1220 aaKnown RBP12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 ETF1P62495 437 aaKnown RBP12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 RBM43Q6ZSC3 357 aaKnown RBP12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 HDXQ7Z353 690 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 SPATS2Q86XZ4 545 aaKnown RBP12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 TMTC2Q8N394 836 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 XAGE3Q8WTP9 111 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 CHAMP1Q96JM3 812 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 CRACR2AQ9BSW2 395 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 TAF1DQ9H5J8 278 aaPredicted RBP12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 VPS18Q9P253 973 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 IMPACTQ9P2X3 320 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 AKAP2Q9Y2D5 859 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 PCDHGA4Q9Y5G9 962 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 POTEB2H3BUK9 544 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 STARD3NLO95772 234 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 TUBBP07437 444 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 USP5P45974 858 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 MAP3K11Q16584 847 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 FILIP1LQ4L180 1135 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 PRPF38BQ5VTL8 546 aaKnown RBP12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 COPS6Q7L5N1 327 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 IQCA1Q86XH1 822 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 CCDC50Q8IVM0 306 aa12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 SRP68Q9UHB9 627 aaKnown RBP12.3□□□□□ -0.44
CHRNB1-208ENST00000576360 CACNA1FO60840 1977 aa12.29□□□□□ -0.44
CHRNB1-208ENST00000576360 EPB41L2O43491 1005 aaKnown RBP12.29□□□□□ -0.44
CHRNB1-208ENST00000576360 FSBPO95073 299 aa12.29□□□□□ -0.44
CHRNB1-208ENST00000576360 TYRO3Q06418 890 aa12.29□□□□□ -0.44
CHRNB1-208ENST00000576360 FLIIQ13045 1269 aa12.29□□□□□ -0.44
CHRNB1-208ENST00000576360 LONRF2Q1L5Z9 754 aa12.29□□□□□ -0.44
CHRNB1-208ENST00000576360 RSRC2Q7L4I2 434 aaKnown RBP12.29□□□□□ -0.44
CHRNB1-208ENST00000576360 NCAPG2Q86XI2 1143 aa12.29□□□□□ -0.44
CHRNB1-208ENST00000576360 C2CD5Q86YS7 1000 aa12.29□□□□□ -0.44
CHRNB1-208ENST00000576360 ANKRD44Q8N8A2 993 aa12.29□□□□□ -0.44
CHRNB1-208ENST00000576360 CEP112Q8N8E3 955 aa12.29□□□□□ -0.44
CHRNB1-208ENST00000576360 LARP6Q9BRS8 491 aaKnown RBP12.29□□□□□ -0.44
CHRNB1-208ENST00000576360 CBX8Q9HC52 389 aa12.29□□□□□ -0.44
CHRNB1-208ENST00000576360 DDX21Q9NR30 783 aaKnown RBP eCLIP12.29□□□□□ -0.44
CHRNB1-208ENST00000576360 CCDC88AQ3V6T2 1871 aa12.29□□□□□ -0.44
CHRNB1-208ENST00000576360 H7C1W4 665 aa12.28□□□□□ -0.44
CHRNB1-208ENST00000576360 ZRSR2Q15696 482 aaKnown RBP12.28□□□□□ -0.44
CHRNB1-208ENST00000576360 HLFQ16534 295 aa12.28□□□□□ -0.44
CHRNB1-208ENST00000576360 CCDC144BQ3MJ40 725 aa12.28□□□□□ -0.44
CHRNB1-208ENST00000576360 BRAPQ7Z569 592 aa12.28□□□□□ -0.44
CHRNB1-208ENST00000576360 CCDC144CPQ8IYA2 1237 aa12.28□□□□□ -0.44
CHRNB1-208ENST00000576360 OSBPL5Q9H0X9 879 aaPredicted RBP12.28□□□□□ -0.44
CHRNB1-208ENST00000576360 TAOK3Q9H2K8 898 aa12.28□□□□□ -0.44
CHRNB1-208ENST00000576360 ZBTB3Q9H5J0 574 aa12.28□□□□□ -0.44
CHRNB1-208ENST00000576360 DBF4Q9UBU7 674 aaPredicted RBP12.28□□□□□ -0.44
CHRNB1-208ENST00000576360 COL15A1P39059 1388 aa12.28□□□□□ -0.44
CHRNB1-208ENST00000576360 EBAG9O00559 213 aa12.27□□□□□ -0.44
CHRNB1-208ENST00000576360 INPP5BP32019 993 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms