RNA–Protein interactions for RNA: ENST00000575815.5

NCBP3-205, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 4,096 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-205ENST00000575815 CCDC47Q96A33 483 aaKnown RBP9.65□□□□□ -0.86
NCBP3-205ENST00000575815 NSUN4Q96CB9 384 aaKnown RBP9.65□□□□□ -0.86
NCBP3-205ENST00000575815 GJB4Q9NTQ9 266 aa9.65□□□□□ -0.86
NCBP3-205ENST00000575815 SLIT2O94813 1529 aa9.65□□□□□ -0.87
NCBP3-205ENST00000575815 SLC1A4P43007 532 aa9.65□□□□□ -0.87
NCBP3-205ENST00000575815 TNNI2P48788 182 aa9.65□□□□□ -0.87
NCBP3-205ENST00000575815 MRE11P49959 708 aa9.65□□□□□ -0.87
NCBP3-205ENST00000575815 EAPPQ56P03 285 aaPredicted RBP9.65□□□□□ -0.87
NCBP3-205ENST00000575815 APOA5Q6Q788 366 aa9.65□□□□□ -0.87
NCBP3-205ENST00000575815 FBXO33Q7Z6M2 555 aa9.65□□□□□ -0.87
NCBP3-205ENST00000575815 RTKN2Q8IZC4 609 aa9.65□□□□□ -0.87
NCBP3-205ENST00000575815 DCP1AQ9NPI6 582 aaPredicted RBP9.65□□□□□ -0.87
NCBP3-205ENST00000575815 NMT2O60551 498 aa9.64□□□□□ -0.87
NCBP3-205ENST00000575815 KRT18P05783 430 aaKnown RBP9.64□□□□□ -0.87
NCBP3-205ENST00000575815 MAP3K11Q16584 847 aa9.64□□□□□ -0.87
NCBP3-205ENST00000575815 CCDC178Q5BJE1 867 aa9.64□□□□□ -0.87
NCBP3-205ENST00000575815 DIS3L2Q8IYB7 885 aaKnown RBP9.64□□□□□ -0.87
NCBP3-205ENST00000575815 NOC3LQ8WTT2 800 aaKnown RBP9.64□□□□□ -0.87
NCBP3-205ENST00000575815 CSRNP1Q96S65 589 aa9.64□□□□□ -0.87
NCBP3-205ENST00000575815 TRIM5Q9C035 493 aa9.64□□□□□ -0.87
NCBP3-205ENST00000575815 ANO8Q9HCE9 1232 aaPredicted RBP9.64□□□□□ -0.87
NCBP3-205ENST00000575815 DACT1Q9NYF0 836 aa9.64□□□□□ -0.87
NCBP3-205ENST00000575815 FRMPD2Q68DX3 1309 aaPredicted RBP9.64□□□□□ -0.87
NCBP3-205ENST00000575815 GDF11O95390 407 aa9.64□□□□□ -0.87
NCBP3-205ENST00000575815 SPICE1Q8N0Z3 855 aa9.64□□□□□ -0.87
NCBP3-205ENST00000575815 AIFM3Q96NN9 605 aa9.64□□□□□ -0.87
NCBP3-205ENST00000575815 SERPINB13Q9UIV8 391 aa9.64□□□□□ -0.87
NCBP3-205ENST00000575815 UBE2HP62256 183 aa9.64□□□□□ -0.87
NCBP3-205ENST00000575815 KRT40Q6A162 431 aa9.64□□□□□ -0.87
NCBP3-205ENST00000575815 CC2D2BQ6DHV5 1058 aa9.64□□□□□ -0.87
NCBP3-205ENST00000575815 PROM2Q8N271 834 aa9.64□□□□□ -0.87
NCBP3-205ENST00000575815 RRP36Q96EU6 259 aaKnown RBP9.64□□□□□ -0.87
NCBP3-205ENST00000575815 ZNF274Q96GC6 653 aaPredicted RBP9.64□□□□□ -0.87
NCBP3-205ENST00000575815 PDGFDQ9GZP0 370 aaPredicted RBP9.64□□□□□ -0.87
NCBP3-205ENST00000575815 STRCP1A6NGW2 1772 aa9.63□□□□□ -0.87
NCBP3-205ENST00000575815 FGFR2P21802 821 aa9.63□□□□□ -0.87
NCBP3-205ENST00000575815 CERKLQ49MI3 558 aaPredicted RBP9.63□□□□□ -0.87
NCBP3-205ENST00000575815 KLHL10Q6JEL2 608 aa9.63□□□□□ -0.87
NCBP3-205ENST00000575815 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.63□□□□□ -0.87
NCBP3-205ENST00000575815 CEP131Q9UPN4 1083 aa9.63□□□□□ -0.87
NCBP3-205ENST00000575815 PFKFB2O60825 505 aa9.63□□□□□ -0.87
NCBP3-205ENST00000575815 CRKP46108 304 aa9.63□□□□□ -0.87
NCBP3-205ENST00000575815 CFAP100Q494V2 611 aa9.63□□□□□ -0.87
NCBP3-205ENST00000575815 CPXCR1Q8N123 301 aa9.63□□□□□ -0.87
NCBP3-205ENST00000575815 SPC24Q8NBT2 197 aa9.63□□□□□ -0.87
NCBP3-205ENST00000575815 MCM7P33993 719 aa9.63□□□□□ -0.87
NCBP3-205ENST00000575815 PLS1Q14651 629 aa9.63□□□□□ -0.87
NCBP3-205ENST00000575815 ZNF174Q15697 407 aa9.63□□□□□ -0.87
NCBP3-205ENST00000575815 CIAPIN1Q6FI81 312 aa9.63□□□□□ -0.87
NCBP3-205ENST00000575815 CYB5R4Q7L1T6 521 aa9.63□□□□□ -0.87
NCBP3-205ENST00000575815 CCDC12Q8WUD4 166 aaPredicted RBP9.63□□□□□ -0.87
NCBP3-205ENST00000575815 CPVLQ9H3G5 476 aa9.63□□□□□ -0.87
NCBP3-205ENST00000575815 GRPEL1Q9HAV7 217 aa9.63□□□□□ -0.87
NCBP3-205ENST00000575815 NEDD4P46934 1319 aa9.63□□□□□ -0.87
NCBP3-205ENST00000575815 SPTLC2O15270 562 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 GADD45BO75293 160 aaPredicted RBP9.62□□□□□ -0.87
NCBP3-205ENST00000575815 TOB2Q14106 344 aaPredicted RBP9.62□□□□□ -0.87
NCBP3-205ENST00000575815 KLHL40Q2TBA0 621 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 TBC1D10BQ4KMP7 808 aaPredicted RBP9.62□□□□□ -0.87
NCBP3-205ENST00000575815 SPECC1Q5M775 1068 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 CERS3Q8IU89 383 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 PCMTD1Q96MG8 357 aaPredicted RBP9.62□□□□□ -0.87
NCBP3-205ENST00000575815 LLPHQ9BRT6 129 aaKnown RBP9.62□□□□□ -0.87
NCBP3-205ENST00000575815 BRPF3Q9ULD4 1205 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 MRC1P22897 1456 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 DEXIO95424 95 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 BRD1O95696 1058 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 JAKMIP3Q5VZ66 844 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 FCHSD1Q86WN1 690 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 CNNM3Q8NE01 707 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 ZNF526Q8TF50 670 aaPredicted RBP9.62□□□□□ -0.87
NCBP3-205ENST00000575815 CUL5Q93034 780 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 MTMR6Q9Y217 621 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 MED23Q9ULK4 1368 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 TRIM75PA6NK02 468 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 CCDC183Q5T5S1 534 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 PIK3AP1Q6ZUJ8 805 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 SLC51AQ86UW1 340 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 CEP57L1Q8IYX8 460 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 IL27Q8NEV9 243 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 PLIN2Q99541 437 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 NAT10Q9H0A0 1025 aaKnown RBP9.62□□□□□ -0.87
NCBP3-205ENST00000575815 SPON1Q9HCB6 807 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 DISP2A7MBM2 1401 aa9.62□□□□□ -0.87
NCBP3-205ENST00000575815 A0A1B0GVL5 298 aa9.61□□□□□ -0.87
NCBP3-205ENST00000575815 BTBD18B2RXH4 712 aa9.61□□□□□ -0.87
NCBP3-205ENST00000575815 KLRF2D3W0D1 207 aa9.61□□□□□ -0.87
NCBP3-205ENST00000575815 LETM1O95202 739 aaPredicted RBP9.61□□□□□ -0.87
NCBP3-205ENST00000575815 UBA7P41226 1012 aa9.61□□□□□ -0.87
NCBP3-205ENST00000575815 CHMP4BP1P59074 171 aa9.61□□□□□ -0.87
NCBP3-205ENST00000575815 USH1GQ495M9 461 aa9.61□□□□□ -0.87
NCBP3-205ENST00000575815 CTR9Q6PD62 1173 aa9.61□□□□□ -0.87
NCBP3-205ENST00000575815 GPKOWQ92917 476 aaPredicted RBP eCLIP9.61□□□□□ -0.87
NCBP3-205ENST00000575815 PLEKHG2Q9H7P9 1386 aa9.61□□□□□ -0.87
NCBP3-205ENST00000575815 TNIP1Q15025 636 aa9.61□□□□□ -0.87
NCBP3-205ENST00000575815 USP17L2Q6R6M4 530 aa9.61□□□□□ -0.87
NCBP3-205ENST00000575815 TDRD7Q8NHU6 1098 aaKnown RBP9.61□□□□□ -0.87
NCBP3-205ENST00000575815 RBM28Q9NW13 759 aaKnown RBP9.61□□□□□ -0.87
NCBP3-205ENST00000575815 SMC2O95347 1197 aa9.61□□□□□ -0.87
NCBP3-205ENST00000575815 AFMP43652 599 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms