RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 KIFAP3Q92845 792 aa11.67□□□□□ -0.54
USP6-206ENST00000575709 COQ7Q99807 217 aa11.67□□□□□ -0.54
USP6-206ENST00000575709 RNF41Q9H4P4 317 aaPredicted RBP11.67□□□□□ -0.54
USP6-206ENST00000575709 TTF2Q9UNY4 1162 aaKnown RBP11.67□□□□□ -0.54
USP6-206ENST00000575709 ANGPTL3Q9Y5C1 460 aa11.67□□□□□ -0.54
USP6-206ENST00000575709 PPP4R4Q6NUP7 873 aa11.67□□□□□ -0.54
USP6-206ENST00000575709 TMOD2Q9NZR1 351 aa11.67□□□□□ -0.54
USP6-206ENST00000575709 TTLL3Q9Y4R7 772 aa11.67□□□□□ -0.54
USP6-206ENST00000575709 IGSF22Q8N9C0 903 aa11.67□□□□□ -0.54
USP6-206ENST00000575709 POMGNT1Q8WZA1 660 aa11.67□□□□□ -0.54
USP6-206ENST00000575709 ARIH1Q9Y4X5 557 aaPredicted RBP11.67□□□□□ -0.54
USP6-206ENST00000575709 DHX57Q6P158 1386 aaKnown RBP11.67□□□□□ -0.54
USP6-206ENST00000575709 RHOBTB1O94844 696 aa11.67□□□□□ -0.54
USP6-206ENST00000575709 GUCY2CP25092 1073 aa11.67□□□□□ -0.54
USP6-206ENST00000575709 GNPTABQ3T906 1256 aa11.67□□□□□ -0.54
USP6-206ENST00000575709 KAT14Q9H8E8 782 aa11.67□□□□□ -0.54
USP6-206ENST00000575709 HS2ST1Q7LGA3 356 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 TLK2Q86UE8 772 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 SECISBP2LQ93073 1101 aaKnown RBP11.66□□□□□ -0.54
USP6-206ENST00000575709 ELP1O95163 1332 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 NBPF26B4DH59 902 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 NBPF14Q5TI25 921 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 NBPF15Q8N660 670 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 MCF2LO15068 1137 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 HAND2P61296 217 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 TSC1Q92574 1164 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 TMX3Q96JJ7 454 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 BZW2Q9Y6E2 419 aaKnown RBP11.66□□□□□ -0.54
USP6-206ENST00000575709 EVI5O60447 810 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 SUN1O94901 812 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 RWDD2BP57060 319 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 ACBD5Q5T8D3 534 aaPredicted RBP11.66□□□□□ -0.54
USP6-206ENST00000575709 PALM2Q8IXS6 379 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 UBAP1Q9NZ09 502 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 SF3B3Q15393 1217 aaKnown RBP11.66□□□□□ -0.54
USP6-206ENST00000575709 TRAF7Q6Q0C0 670 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 NME8Q8N427 588 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 ARMC2Q8NEN0 867 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 TRPC5Q9UL62 973 aaPredicted RBP11.66□□□□□ -0.54
USP6-206ENST00000575709 FAM180AQ6UWF9 173 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 WDR75Q8IWA0 830 aaKnown RBP11.66□□□□□ -0.54
USP6-206ENST00000575709 TMCO5AQ8N6Q1 288 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 P3H4Q92791 437 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 RNF34Q969K3 372 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 HOMER3Q9NSC5 361 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 ANGPTL2Q9UKU9 493 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 APOBRQ0VD83 1088 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 FOXD4Q12950 439 aaPredicted RBP11.66□□□□□ -0.54
USP6-206ENST00000575709 MCTP2Q6DN12 878 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 TMTC3Q6ZXV5 915 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 CCDC197Q8NCU1 140 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 ZKSCAN3Q9BRR0 538 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 TRIM56Q9BRZ2 755 aaKnown RBP11.66□□□□□ -0.54
USP6-206ENST00000575709 ALG1Q9BT22 464 aa11.66□□□□□ -0.54
USP6-206ENST00000575709 BRD3Q15059 726 aa11.65□□□□□ -0.54
USP6-206ENST00000575709 RAB17Q9H0T7 212 aa11.65□□□□□ -0.54
USP6-206ENST00000575709 TRPC1P48995 793 aa11.65□□□□□ -0.54
USP6-206ENST00000575709 BICDL1Q6ZP65 573 aa11.65□□□□□ -0.54
USP6-206ENST00000575709 LRRC8CQ8TDW0 803 aa11.65□□□□□ -0.54
USP6-206ENST00000575709 KLHL29Q96CT2 875 aa11.65□□□□□ -0.54
USP6-206ENST00000575709 PARP2Q9UGN5 583 aa11.65□□□□□ -0.54
USP6-206ENST00000575709 SYCE1LA8MT33 242 aa11.65□□□□□ -0.54
USP6-206ENST00000575709 PHBP35232 272 aa11.65□□□□□ -0.54
USP6-206ENST00000575709 PLS1Q14651 629 aa11.65□□□□□ -0.54
USP6-206ENST00000575709 ASIC2Q16515 512 aa11.65□□□□□ -0.54
USP6-206ENST00000575709 PSMD7P51665 324 aa11.65□□□□□ -0.54
USP6-206ENST00000575709 CABP4P57796 275 aa11.65□□□□□ -0.54
USP6-206ENST00000575709 MAP3K12Q12852 859 aa11.65□□□□□ -0.54
USP6-206ENST00000575709 PLEKHO1Q53GL0 409 aaPredicted RBP11.65□□□□□ -0.54
USP6-206ENST00000575709 CAVIN4Q5BKX8 364 aa11.65□□□□□ -0.54
USP6-206ENST00000575709 BSPRYQ5W0U4 402 aa11.65□□□□□ -0.54
USP6-206ENST00000575709 CYTH2Q99418 400 aa11.65□□□□□ -0.54
USP6-206ENST00000575709 TMED10P49755 219 aaKnown RBP11.65□□□□□ -0.55
USP6-206ENST00000575709 PDE11AQ9HCR9 933 aa11.65□□□□□ -0.55
USP6-206ENST00000575709 H3BRJ5 948 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 TRIM59Q8IWR1 403 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 CABP2Q9NPB3 220 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 USTQ9Y2C2 406 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 DAB1O75553 588 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 NBPF7P0C2Y1 421 aaPredicted RBP11.64□□□□□ -0.55
USP6-206ENST00000575709 TNFAIP3P21580 790 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 BEND3Q5T5X7 828 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 CCDC152Q4G0S7 254 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 NLRP9Q7RTR0 991 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 NOC4LQ9BVI4 516 aaKnown RBP11.64□□□□□ -0.55
USP6-206ENST00000575709 VPS16Q9H269 839 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 CALM1P0DP23 149 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 CALM2P0DP24 149 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 CALM3P0DP25 149 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 DACH2Q96NX9 599 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 SH3GL1Q99961 368 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 CCDC8Q9H0W5 538 aaPredicted RBP11.64□□□□□ -0.55
USP6-206ENST00000575709 ZSCAN32Q9NX65 697 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 GSTA4O15217 222 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 PPP2R1AP30153 589 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 KCTD16Q68DU8 428 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 CCDC117Q8IWD4 279 aaPredicted RBP11.64□□□□□ -0.55
USP6-206ENST00000575709 CHMP6Q96FZ7 201 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 FSCBQ5H9T9 825 aa11.64□□□□□ -0.55
USP6-206ENST00000575709 MFSD6Q6ZSS7 791 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms