RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 SCYL3Q8IZE3 742 aa25.01■■□□□ 1.59
HCFC1R1-208ENST00000575214 LCORLQ8N3X6 602 aa25.01■■□□□ 1.59
HCFC1R1-208ENST00000575214 PICK1Q9NRD5 415 aa25.01■■□□□ 1.59
HCFC1R1-208ENST00000575214 HERC5Q9UII4 1024 aaKnown RBP25.01■■□□□ 1.59
HCFC1R1-208ENST00000575214 IRF6O14896 467 aa25■■□□□ 1.59
HCFC1R1-208ENST00000575214 CRACR2BQ8N4Y2 399 aaPredicted RBP25■■□□□ 1.59
HCFC1R1-208ENST00000575214 MS4A4AQ96JQ5 239 aa25■■□□□ 1.59
HCFC1R1-208ENST00000575214 TRIM34Q9BYJ4 488 aa25■■□□□ 1.59
HCFC1R1-208ENST00000575214 ARMT1Q9H993 441 aa25■■□□□ 1.59
HCFC1R1-208ENST00000575214 CDK5RAP2Q96SN8 1893 aa24.99■■□□□ 1.59
HCFC1R1-208ENST00000575214 CCL15-CCL14A0A0B4J2E2 113 aa24.99■■□□□ 1.59
HCFC1R1-208ENST00000575214 IGF2BP3O00425 579 aaKnown RBP eCLIP24.99■■□□□ 1.59
HCFC1R1-208ENST00000575214 CTNND1O60716 968 aaKnown RBP24.99■■□□□ 1.59
HCFC1R1-208ENST00000575214 MBD4O95243 580 aa24.99■■□□□ 1.59
HCFC1R1-208ENST00000575214 ALDH1A1P00352 501 aa24.99■■□□□ 1.59
HCFC1R1-208ENST00000575214 CCL15Q16663 113 aa24.99■■□□□ 1.59
HCFC1R1-208ENST00000575214 OTUD7BQ6GQQ9 843 aa24.99■■□□□ 1.59
HCFC1R1-208ENST00000575214 FOCADQ5VW36 1801 aa24.99■■□□□ 1.59
HCFC1R1-208ENST00000575214 TESPA1A2RU30 521 aaPredicted RBP24.98■■□□□ 1.59
HCFC1R1-208ENST00000575214 TBC1D8O95759 1140 aa24.98■■□□□ 1.59
HCFC1R1-208ENST00000575214 SNAPC2Q13487 334 aa24.98■■□□□ 1.59
HCFC1R1-208ENST00000575214 TNS4Q8IZW8 715 aa24.98■■□□□ 1.59
HCFC1R1-208ENST00000575214 PDE1AP54750 535 aa24.97■■□□□ 1.59
HCFC1R1-208ENST00000575214 CHD1LQ86WJ1 897 aa24.97■■□□□ 1.59
HCFC1R1-208ENST00000575214 FOXP4Q8IVH2 680 aaPredicted RBP24.97■■□□□ 1.59
HCFC1R1-208ENST00000575214 SDR42E1Q8WUS8 393 aa24.97■■□□□ 1.59
HCFC1R1-208ENST00000575214 BRI3BPQ8WY22 251 aa24.97■■□□□ 1.59
HCFC1R1-208ENST00000575214 CETPP11597 493 aa24.96■■□□□ 1.59
HCFC1R1-208ENST00000575214 NUCB1Q02818 461 aa24.96■■□□□ 1.59
HCFC1R1-208ENST00000575214 LRRFIP1Q32MZ4 808 aaKnown RBP24.96■■□□□ 1.59
HCFC1R1-208ENST00000575214 PTPN18Q99952 460 aa24.96■■□□□ 1.59
HCFC1R1-208ENST00000575214 STAP2Q9UGK3 403 aa24.96■■□□□ 1.59
HCFC1R1-208ENST00000575214 PTPRAP18433 802 aa24.95■■□□□ 1.59
HCFC1R1-208ENST00000575214 TTC6Q86TZ1 520 aa24.95■■□□□ 1.59
HCFC1R1-208ENST00000575214 FSD1Q9BTV5 496 aa24.95■■□□□ 1.59
HCFC1R1-208ENST00000575214 PUS7LQ9H0K6 701 aaKnown RBP24.95■■□□□ 1.59
HCFC1R1-208ENST00000575214 DNAJC18Q9H819 358 aa24.95■■□□□ 1.59
HCFC1R1-208ENST00000575214 ZHX2Q9Y6X8 837 aa24.95■■□□□ 1.59
HCFC1R1-208ENST00000575214 LAMB1P07942 1786 aa24.95■■□□□ 1.58
HCFC1R1-208ENST00000575214 RNF113AO15541 343 aaKnown RBP24.94■■□□□ 1.58
HCFC1R1-208ENST00000575214 POLR3DP05423 398 aaPredicted RBP24.94■■□□□ 1.58
HCFC1R1-208ENST00000575214 ZFYP08048 801 aaPredicted RBP24.94■■□□□ 1.58
HCFC1R1-208ENST00000575214 METTL16Q86W50 562 aaKnown RBP24.94■■□□□ 1.58
HCFC1R1-208ENST00000575214 MCM9Q9NXL9 1143 aa24.94■■□□□ 1.58
HCFC1R1-208ENST00000575214 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.94■■□□□ 1.58
HCFC1R1-208ENST00000575214 MYH7P12883 1935 aa24.94■■□□□ 1.58
HCFC1R1-208ENST00000575214 SIPA1L1O43166 1804 aa24.93■■□□□ 1.58
HCFC1R1-208ENST00000575214 PRKAB2O43741 272 aa24.93■■□□□ 1.58
HCFC1R1-208ENST00000575214 CAP2P40123 477 aa24.93■■□□□ 1.58
HCFC1R1-208ENST00000575214 APPBP2Q92624 585 aa24.93■■□□□ 1.58
HCFC1R1-208ENST00000575214 DCP1AQ9NPI6 582 aaPredicted RBP24.93■■□□□ 1.58
HCFC1R1-208ENST00000575214 KCNH4Q9UQ05 1017 aa24.93■■□□□ 1.58
HCFC1R1-208ENST00000575214 RRP1BQ14684 758 aaKnown RBP24.93■■□□□ 1.58
HCFC1R1-208ENST00000575214 CCDC84Q86UT8 332 aaPredicted RBP24.93■■□□□ 1.58
HCFC1R1-208ENST00000575214 CFHR5Q9BXR6 569 aa24.93■■□□□ 1.58
HCFC1R1-208ENST00000575214 SERPINB13Q9UIV8 391 aa24.93■■□□□ 1.58
HCFC1R1-208ENST00000575214 DOCK1Q14185 1865 aa24.92■■□□□ 1.58
HCFC1R1-208ENST00000575214 MYH1P12882 1939 aa24.92■■□□□ 1.58
HCFC1R1-208ENST00000575214 OSBP2Q969R2 916 aa24.92■■□□□ 1.58
HCFC1R1-208ENST00000575214 EHD4Q9H223 541 aa24.92■■□□□ 1.58
HCFC1R1-208ENST00000575214 ATP8A2Q9NTI2 1148 aa24.92■■□□□ 1.58
HCFC1R1-208ENST00000575214 SLC4A4Q9Y6R1 1079 aa24.92■■□□□ 1.58
HCFC1R1-208ENST00000575214 CXCL11O14625 94 aa24.91■■□□□ 1.58
HCFC1R1-208ENST00000575214 PLCD1P51178 756 aa24.91■■□□□ 1.58
HCFC1R1-208ENST00000575214 FAM43AQ8N2R8 423 aa24.91■■□□□ 1.58
HCFC1R1-208ENST00000575214 NAV1Q8NEY1 1877 aa24.91■■□□□ 1.58
HCFC1R1-208ENST00000575214 DDRGK1Q96HY6 314 aa24.91■■□□□ 1.58
HCFC1R1-208ENST00000575214 R3HDMLQ9H3Y0 253 aa24.91■■□□□ 1.58
HCFC1R1-208ENST00000575214 AFG3L2Q9Y4W6 797 aa24.91■■□□□ 1.58
HCFC1R1-208ENST00000575214 BTBD19C9JJ37 291 aa24.9■■□□□ 1.58
HCFC1R1-208ENST00000575214 GPR25O00155 361 aa24.9■■□□□ 1.58
HCFC1R1-208ENST00000575214 GDF11O95390 407 aa24.9■■□□□ 1.58
HCFC1R1-208ENST00000575214 EVI5LQ96CN4 794 aa24.9■■□□□ 1.58
HCFC1R1-208ENST00000575214 DDX60LQ5H9U9 1706 aaKnown RBP24.89■■□□□ 1.58
HCFC1R1-208ENST00000575214 TRIM75PA6NK02 468 aa24.89■■□□□ 1.57
HCFC1R1-208ENST00000575214 CRHR2Q13324 411 aa24.89■■□□□ 1.57
HCFC1R1-208ENST00000575214 TAF1CQ15572 869 aaPredicted RBP24.89■■□□□ 1.57
HCFC1R1-208ENST00000575214 USP17L5A8MUK1 530 aa24.88■■□□□ 1.57
HCFC1R1-208ENST00000575214 ASNSP08243 561 aa24.88■■□□□ 1.57
HCFC1R1-208ENST00000575214 PLEKHM2Q8IWE5 1019 aa24.88■■□□□ 1.57
HCFC1R1-208ENST00000575214 AMOTL1Q8IY63 956 aa24.88■■□□□ 1.57
HCFC1R1-208ENST00000575214 ZNF296Q8WUU4 475 aaPredicted RBP24.88■■□□□ 1.57
HCFC1R1-208ENST00000575214 STRBPQ96SI9 672 aaKnown RBP24.88■■□□□ 1.57
HCFC1R1-208ENST00000575214 CASP8AP2Q9UKL3 1982 aa24.87■■□□□ 1.57
HCFC1R1-208ENST00000575214 A0A0G2JLL6 359 aaPredicted RBP24.87■■□□□ 1.57
HCFC1R1-208ENST00000575214 M0R2C6 588 aa24.87■■□□□ 1.57
HCFC1R1-208ENST00000575214 GPAA1O43292 621 aa24.87■■□□□ 1.57
HCFC1R1-208ENST00000575214 CYP2D6P10635 497 aa24.87■■□□□ 1.57
HCFC1R1-208ENST00000575214 NOM1Q5C9Z4 860 aaKnown RBP24.87■■□□□ 1.57
HCFC1R1-208ENST00000575214 PRRT2Q7Z6L0 340 aaPredicted RBP24.87■■□□□ 1.57
HCFC1R1-208ENST00000575214 TBC1D2Q9BYX2 928 aa24.87■■□□□ 1.57
HCFC1R1-208ENST00000575214 ZFYVE28Q9HCC9 887 aa24.87■■□□□ 1.57
HCFC1R1-208ENST00000575214 ZCCHC17Q9NP64 241 aaKnown RBP24.87■■□□□ 1.57
HCFC1R1-208ENST00000575214 TRIM6-TRIM34B2RNG4 842 aa24.86■■□□□ 1.57
HCFC1R1-208ENST00000575214 EVX2Q03828 476 aa24.86■■□□□ 1.57
HCFC1R1-208ENST00000575214 SHROOM1Q2M3G4 852 aaPredicted RBP24.86■■□□□ 1.57
HCFC1R1-208ENST00000575214 TATDN1Q6P1N9 297 aa24.86■■□□□ 1.57
HCFC1R1-208ENST00000575214 GADL1Q6ZQY3 521 aa24.86■■□□□ 1.57
HCFC1R1-208ENST00000575214 ANKRD23Q86SG2 305 aa24.86■■□□□ 1.57
HCFC1R1-208ENST00000575214 AS3MTQ9HBK9 375 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms