RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 SAFBQ15424 915 aaKnown RBP eCLIP10.3□□□□□ -0.76
NCBP3-204ENST00000574911 RRP12Q5JTH9 1297 aaKnown RBP10.3□□□□□ -0.76
NCBP3-204ENST00000574911 SMAP1Q8IYB5 467 aaPredicted RBP10.3□□□□□ -0.76
NCBP3-204ENST00000574911 DIS3L2Q8IYB7 885 aaKnown RBP10.3□□□□□ -0.76
NCBP3-204ENST00000574911 TRIM22Q8IYM9 498 aa10.3□□□□□ -0.76
NCBP3-204ENST00000574911 CNNM3Q8NE01 707 aa10.3□□□□□ -0.76
NCBP3-204ENST00000574911 ZKSCAN3Q9BRR0 538 aa10.3□□□□□ -0.76
NCBP3-204ENST00000574911 ZMYND15Q9H091 742 aa10.3□□□□□ -0.76
NCBP3-204ENST00000574911 RNF41Q9H4P4 317 aaPredicted RBP10.3□□□□□ -0.76
NCBP3-204ENST00000574911 ANAPC4Q9UJX5 808 aa10.3□□□□□ -0.76
NCBP3-204ENST00000574911 FBXO2Q9UK22 296 aaPredicted RBP10.3□□□□□ -0.76
NCBP3-204ENST00000574911 KCNJ14Q9UNX9 436 aa10.3□□□□□ -0.76
NCBP3-204ENST00000574911 CICQ96RK0 1608 aaPredicted RBP10.3□□□□□ -0.76
NCBP3-204ENST00000574911 ATP1A3P13637 1013 aa10.29□□□□□ -0.76
NCBP3-204ENST00000574911 SFPQP23246 707 aaKnown RBP eCLIP10.29□□□□□ -0.76
NCBP3-204ENST00000574911 PTPREP23469 700 aa10.29□□□□□ -0.76
NCBP3-204ENST00000574911 ATP6V1AP38606 617 aa10.29□□□□□ -0.76
NCBP3-204ENST00000574911 PPARAQ07869 468 aa10.29□□□□□ -0.76
NCBP3-204ENST00000574911 OLFM4Q6UX06 510 aa10.29□□□□□ -0.76
NCBP3-204ENST00000574911 MIGA1Q8NAN2 632 aa10.29□□□□□ -0.76
NCBP3-204ENST00000574911 COL4A1P02462 1669 aa10.29□□□□□ -0.76
NCBP3-204ENST00000574911 CCDC196A0A1B0GTZ2 297 aa10.29□□□□□ -0.76
NCBP3-204ENST00000574911 ERICH2A1L162 156 aa10.29□□□□□ -0.76
NCBP3-204ENST00000574911 CBFA2T2O43439 604 aa10.29□□□□□ -0.76
NCBP3-204ENST00000574911 ITPK1Q13572 414 aa10.29□□□□□ -0.76
NCBP3-204ENST00000574911 RILPL1Q5EBL4 403 aa10.29□□□□□ -0.76
NCBP3-204ENST00000574911 DPF2Q92785 391 aa10.29□□□□□ -0.76
NCBP3-204ENST00000574911 PPP1R13BQ96KQ4 1090 aa10.29□□□□□ -0.76
NCBP3-204ENST00000574911 CDCA7Q9BWT1 371 aaPredicted RBP10.29□□□□□ -0.76
NCBP3-204ENST00000574911 LRP2BPQ9P2M1 347 aa10.29□□□□□ -0.76
NCBP3-204ENST00000574911 PCDHA5Q9Y5H7 936 aa10.29□□□□□ -0.76
NCBP3-204ENST00000574911 ZNF804BA4D1E1 1349 aa10.29□□□□□ -0.76
NCBP3-204ENST00000574911 LOC102724428A0A0B4J2F2 783 aa10.28□□□□□ -0.76
NCBP3-204ENST00000574911 BMP6P22004 513 aa10.28□□□□□ -0.76
NCBP3-204ENST00000574911 CYP7A1P22680 504 aa10.28□□□□□ -0.76
NCBP3-204ENST00000574911 SIK1P57059 783 aa10.28□□□□□ -0.76
NCBP3-204ENST00000574911 SEC23AQ15436 765 aa10.28□□□□□ -0.76
NCBP3-204ENST00000574911 ADGRA1Q86SQ6 560 aa10.28□□□□□ -0.76
NCBP3-204ENST00000574911 ZNF654Q8IZM8 581 aa10.28□□□□□ -0.76
NCBP3-204ENST00000574911 ZNF579Q8NAF0 562 aaKnown RBP10.28□□□□□ -0.76
NCBP3-204ENST00000574911 FANCBQ8NB91 859 aa10.28□□□□□ -0.76
NCBP3-204ENST00000574911 NIP7Q9Y221 180 aaKnown RBP eCLIP10.28□□□□□ -0.76
NCBP3-204ENST00000574911 UBASH3AP57075 661 aa10.28□□□□□ -0.76
NCBP3-204ENST00000574911 GRIN1Q05586 938 aa10.28□□□□□ -0.76
NCBP3-204ENST00000574911 NAA30Q147X3 362 aaPredicted RBP10.28□□□□□ -0.76
NCBP3-204ENST00000574911 NT5DC1Q5TFE4 455 aa10.28□□□□□ -0.76
NCBP3-204ENST00000574911 KIF18AQ8NI77 898 aa10.28□□□□□ -0.76
NCBP3-204ENST00000574911 CDC5LQ99459 802 aaKnown RBP10.28□□□□□ -0.76
NCBP3-204ENST00000574911 TOMM22Q9NS69 142 aa10.28□□□□□ -0.76
NCBP3-204ENST00000574911 FOXN1O15353 648 aa10.27□□□□□ -0.76
NCBP3-204ENST00000574911 PDE4BQ07343 736 aa10.27□□□□□ -0.76
NCBP3-204ENST00000574911 VSTM4Q8IW00 320 aa10.27□□□□□ -0.76
NCBP3-204ENST00000574911 CMTR1Q8N1G2 835 aaKnown RBP10.27□□□□□ -0.76
NCBP3-204ENST00000574911 TMX1Q9H3N1 280 aa10.27□□□□□ -0.76
NCBP3-204ENST00000574911 CGNQ9P2M7 1197 aaKnown RBP10.27□□□□□ -0.76
NCBP3-204ENST00000574911 HOOK1Q9UJC3 728 aaKnown RBP10.27□□□□□ -0.76
NCBP3-204ENST00000574911 MAN1B1Q9UKM7 699 aa10.27□□□□□ -0.76
NCBP3-204ENST00000574911 SRPRBQ9Y5M8 271 aaKnown RBP10.27□□□□□ -0.76
NCBP3-204ENST00000574911 MORC2Q9Y6X9 1032 aaPredicted RBP10.27□□□□□ -0.76
NCBP3-204ENST00000574911 MAGEB6P1A0A0J9YX57 407 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 SERPINC1P01008 464 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 TUBB4AP04350 444 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 SARSP49591 514 aaKnown RBP10.27□□□□□ -0.77
NCBP3-204ENST00000574911 NR5A1Q13285 461 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 PPP2R5BQ15173 497 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 SPECC1Q5M775 1068 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 ACSBG1Q96GR2 724 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 RIOK1Q9BRS2 568 aaKnown RBP10.27□□□□□ -0.77
NCBP3-204ENST00000574911 FANCLQ9NW38 375 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 THRAP3Q9Y2W1 955 aaKnown RBP10.27□□□□□ -0.77
NCBP3-204ENST00000574911 PCDHB6Q9Y5E3 794 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 SPATA31A1Q5TZJ5 1347 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 AHDC1Q5TGY3 1603 aaPredicted RBP10.27□□□□□ -0.77
NCBP3-204ENST00000574911 NRDCO43847 1150 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 CBX1P83916 185 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 POSTNQ15063 836 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 DDB1Q16531 1140 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 OXER1Q8TDS5 423 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 NUP133Q8WUM0 1156 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 SDR42E1Q8WUS8 393 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 ESR2Q92731 530 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 SHISA4Q96DD7 197 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 ERO1AQ96HE7 468 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 UBAC1Q9BSL1 405 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 RNF26Q9BY78 433 aaPredicted RBP10.27□□□□□ -0.77
NCBP3-204ENST00000574911 SERTAD1Q9UHV2 236 aa10.27□□□□□ -0.77
NCBP3-204ENST00000574911 ZNF215Q9UL58 517 aaPredicted RBP10.27□□□□□ -0.77
NCBP3-204ENST00000574911 COL1A1P02452 1464 aaPredicted RBP10.26□□□□□ -0.77
NCBP3-204ENST00000574911 A0A1B0GUL6 1792 aa10.26□□□□□ -0.77
NCBP3-204ENST00000574911 MINDY4BA8MYZ0 360 aa10.26□□□□□ -0.77
NCBP3-204ENST00000574911 TNKSO95271 1327 aa10.26□□□□□ -0.77
NCBP3-204ENST00000574911 PRR29P0C7W0 189 aa10.26□□□□□ -0.77
NCBP3-204ENST00000574911 CCDC82Q8N4S0 544 aa10.26□□□□□ -0.77
NCBP3-204ENST00000574911 MARCH10Q8NA82 808 aaPredicted RBP10.26□□□□□ -0.77
NCBP3-204ENST00000574911 FEZ1Q99689 392 aa10.26□□□□□ -0.77
NCBP3-204ENST00000574911 NOL10Q9BSC4 688 aaKnown RBP10.26□□□□□ -0.77
NCBP3-204ENST00000574911 CEP131Q9UPN4 1083 aa10.26□□□□□ -0.77
NCBP3-204ENST00000574911 NRAPQ86VF7 1730 aa10.26□□□□□ -0.77
NCBP3-204ENST00000574911 DUOX1Q9NRD9 1551 aa10.26□□□□□ -0.77
NCBP3-204ENST00000574911 POLR2DO15514 142 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms