RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 SEC23AQ15436 765 aa16.3■□□□□ 0.2
VPS33B-208ENST00000574755 CRY2Q49AN0 593 aa16.3■□□□□ 0.2
VPS33B-208ENST00000574755 IQCA1Q86XH1 822 aa16.3■□□□□ 0.2
VPS33B-208ENST00000574755 CCDC82Q8N4S0 544 aa16.3■□□□□ 0.2
VPS33B-208ENST00000574755 FANCBQ8NB91 859 aa16.3■□□□□ 0.2
VPS33B-208ENST00000574755 WDR66Q8TBY9 1149 aa16.3■□□□□ 0.2
VPS33B-208ENST00000574755 MRPS27Q92552 414 aaKnown RBP16.3■□□□□ 0.2
VPS33B-208ENST00000574755 ZSCAN10Q96SZ4 725 aaPredicted RBP16.3■□□□□ 0.2
VPS33B-208ENST00000574755 KIAA1551Q9HCM1 1747 aa16.3■□□□□ 0.2
VPS33B-208ENST00000574755 ZBTB22O15209 634 aa16.29■□□□□ 0.2
VPS33B-208ENST00000574755 ADCY5O95622 1261 aa16.29■□□□□ 0.2
VPS33B-208ENST00000574755 LDHBP07195 334 aaKnown RBP16.29■□□□□ 0.2
VPS33B-208ENST00000574755 ANO6Q4KMQ2 910 aa16.29■□□□□ 0.2
VPS33B-208ENST00000574755 ANO1Q5XXA6 986 aa16.29■□□□□ 0.2
VPS33B-208ENST00000574755 ENAHQ8N8S7 591 aaPredicted RBP16.29■□□□□ 0.2
VPS33B-208ENST00000574755 GPR101Q96P66 508 aaPredicted RBP16.29■□□□□ 0.2
VPS33B-208ENST00000574755 CTAGE5O15320 804 aa16.29■□□□□ 0.2
VPS33B-208ENST00000574755 CMTR1Q8N1G2 835 aaKnown RBP16.29■□□□□ 0.2
VPS33B-208ENST00000574755 ENGASEQ8NFI3 743 aa16.29■□□□□ 0.2
VPS33B-208ENST00000574755 TDRD7Q8NHU6 1098 aaKnown RBP16.29■□□□□ 0.2
VPS33B-208ENST00000574755 RBM17Q96I25 401 aaKnown RBP16.29■□□□□ 0.2
VPS33B-208ENST00000574755 NOL7Q9UMY1 257 aaKnown RBP16.29■□□□□ 0.2
VPS33B-208ENST00000574755 A0A1W2PQ27 194 aa16.28■□□□□ 0.2
VPS33B-208ENST00000574755 A0A1W2PQ64 194 aa16.28■□□□□ 0.2
VPS33B-208ENST00000574755 A0A1W2PQD8 194 aa16.28■□□□□ 0.2
VPS33B-208ENST00000574755 GPSM2P81274 684 aa16.28■□□□□ 0.2
VPS33B-208ENST00000574755 IFIT1BQ5T764 474 aaKnown RBP16.28■□□□□ 0.2
VPS33B-208ENST00000574755 ARPP21Q9UBL0 812 aaPredicted RBP16.28■□□□□ 0.2
VPS33B-208ENST00000574755 UFL1O94874 794 aa16.28■□□□□ 0.2
VPS33B-208ENST00000574755 FGRP09769 529 aa16.28■□□□□ 0.2
VPS33B-208ENST00000574755 GUCY1A2P33402 732 aa16.28■□□□□ 0.2
VPS33B-208ENST00000574755 MYH6P13533 1939 aa16.27■□□□□ 0.2
VPS33B-208ENST00000574755 A0A1B0GVL5 298 aa16.27■□□□□ 0.2
VPS33B-208ENST00000574755 DEXIO95424 95 aa16.27■□□□□ 0.2
VPS33B-208ENST00000574755 SLC3A2P08195 630 aaKnown RBP16.27■□□□□ 0.2
VPS33B-208ENST00000574755 U2AF2P26368 475 aaKnown RBP eCLIP16.27■□□□□ 0.2
VPS33B-208ENST00000574755 EVX2Q03828 476 aa16.27■□□□□ 0.2
VPS33B-208ENST00000574755 TXNRD1Q16881 649 aa16.27■□□□□ 0.2
VPS33B-208ENST00000574755 NBPF11Q86T75 865 aa16.27■□□□□ 0.2
VPS33B-208ENST00000574755 LUZP1Q86V48 1076 aa16.27■□□□□ 0.2
VPS33B-208ENST00000574755 CRACR2BQ8N4Y2 399 aaPredicted RBP16.27■□□□□ 0.2
VPS33B-208ENST00000574755 DDR1Q08345 913 aa16.27■□□□□ 0.19
VPS33B-208ENST00000574755 PPP2R5BQ15173 497 aa16.27■□□□□ 0.19
VPS33B-208ENST00000574755 CATIPQ7Z7H3 387 aa16.27■□□□□ 0.19
VPS33B-208ENST00000574755 FMR1NBQ8N0W7 255 aaPredicted RBP16.27■□□□□ 0.19
VPS33B-208ENST00000574755 DLEC1Q9Y238 1755 aa16.27■□□□□ 0.19
VPS33B-208ENST00000574755 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.26■□□□□ 0.19
VPS33B-208ENST00000574755 NDUFA8P51970 172 aa16.26■□□□□ 0.19
VPS33B-208ENST00000574755 SAFBQ15424 915 aaKnown RBP eCLIP16.26■□□□□ 0.19
VPS33B-208ENST00000574755 C15orf52Q6ZUT6 534 aaKnown RBP16.26■□□□□ 0.19
VPS33B-208ENST00000574755 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.26■□□□□ 0.19
VPS33B-208ENST00000574755 CBX8Q9HC52 389 aa16.26■□□□□ 0.19
VPS33B-208ENST00000574755 MCM9Q9NXL9 1143 aa16.26■□□□□ 0.19
VPS33B-208ENST00000574755 GGA1Q9UJY5 639 aa16.26■□□□□ 0.19
VPS33B-208ENST00000574755 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.26■□□□□ 0.19
VPS33B-208ENST00000574755 POLRMTO00411 1230 aaKnown RBP16.26■□□□□ 0.19
VPS33B-208ENST00000574755 ORC4O43929 436 aa16.26■□□□□ 0.19
VPS33B-208ENST00000574755 MMP1P03956 469 aa16.26■□□□□ 0.19
VPS33B-208ENST00000574755 CYP2D6P10635 497 aa16.26■□□□□ 0.19
VPS33B-208ENST00000574755 ATP2B4P23634 1241 aa16.26■□□□□ 0.19
VPS33B-208ENST00000574755 SLC39A14Q15043 492 aa16.26■□□□□ 0.19
VPS33B-208ENST00000574755 SBK1Q52WX2 424 aa16.26■□□□□ 0.19
VPS33B-208ENST00000574755 DNAJC25Q9H1X3 360 aa16.26■□□□□ 0.19
VPS33B-208ENST00000574755 ZKSCAN5Q9Y2L8 839 aa16.26■□□□□ 0.19
VPS33B-208ENST00000574755 IGSF3O75054 1194 aa16.25■□□□□ 0.19
VPS33B-208ENST00000574755 BBOX1O75936 387 aa16.25■□□□□ 0.19
VPS33B-208ENST00000574755 USP5P45974 858 aa16.25■□□□□ 0.19
VPS33B-208ENST00000574755 ZNF165P49910 485 aa16.25■□□□□ 0.19
VPS33B-208ENST00000574755 GSTO1P78417 241 aa16.25■□□□□ 0.19
VPS33B-208ENST00000574755 PDE4BQ07343 736 aa16.25■□□□□ 0.19
VPS33B-208ENST00000574755 DIXDC1Q155Q3 683 aa16.25■□□□□ 0.19
VPS33B-208ENST00000574755 SLC4A8Q2Y0W8 1093 aa16.25■□□□□ 0.19
VPS33B-208ENST00000574755 AEBP2Q6ZN18 517 aaPredicted RBP16.25■□□□□ 0.19
VPS33B-208ENST00000574755 PROM2Q8N271 834 aa16.25■□□□□ 0.19
VPS33B-208ENST00000574755 KCNJ14Q9UNX9 436 aa16.25■□□□□ 0.19
VPS33B-208ENST00000574755 MARCKSP29966 332 aaPredicted RBP16.24■□□□□ 0.19
VPS33B-208ENST00000574755 AKAP17AQ02040 695 aaKnown RBP16.24■□□□□ 0.19
VPS33B-208ENST00000574755 NOSTRINQ8IVI9 506 aa16.24■□□□□ 0.19
VPS33B-208ENST00000574755 DIS3L2Q8IYB7 885 aaKnown RBP16.24■□□□□ 0.19
VPS33B-208ENST00000574755 SDF4Q9BRK5 362 aa16.24■□□□□ 0.19
VPS33B-208ENST00000574755 NOL10Q9BSC4 688 aaKnown RBP16.24■□□□□ 0.19
VPS33B-208ENST00000574755 CD209Q9NNX6 404 aa16.24■□□□□ 0.19
VPS33B-208ENST00000574755 BTBD18B2RXH4 712 aa16.24■□□□□ 0.19
VPS33B-208ENST00000574755 AP5Z1O43299 807 aa16.24■□□□□ 0.19
VPS33B-208ENST00000574755 BAG3O95817 575 aa16.24■□□□□ 0.19
VPS33B-208ENST00000574755 USP17L8P0C7I0 530 aa16.24■□□□□ 0.19
VPS33B-208ENST00000574755 GRIK5Q16478 980 aa16.24■□□□□ 0.19
VPS33B-208ENST00000574755 FAM47AQ5JRC9 791 aa16.24■□□□□ 0.19
VPS33B-208ENST00000574755 JMYQ8N9B5 988 aa16.24■□□□□ 0.19
VPS33B-208ENST00000574755 RNF26Q9BY78 433 aaPredicted RBP16.24■□□□□ 0.19
VPS33B-208ENST00000574755 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.24■□□□□ 0.19
VPS33B-208ENST00000574755 TSPY2A6NKD2 308 aa16.23■□□□□ 0.19
VPS33B-208ENST00000574755 CAVIN2O95810 425 aa16.23■□□□□ 0.19
VPS33B-208ENST00000574755 CALM1P0DP23 149 aa16.23■□□□□ 0.19
VPS33B-208ENST00000574755 CALM2P0DP24 149 aa16.23■□□□□ 0.19
VPS33B-208ENST00000574755 CALM3P0DP25 149 aa16.23■□□□□ 0.19
VPS33B-208ENST00000574755 HMGB2P26583 209 aaKnown RBP16.23■□□□□ 0.19
VPS33B-208ENST00000574755 SH3RF3Q8TEJ3 882 aaPredicted RBP16.23■□□□□ 0.19
VPS33B-208ENST00000574755 NMT2O60551 498 aa16.23■□□□□ 0.19
VPS33B-208ENST00000574755 PPP6R2O75170 966 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms