RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 FMNL1O95466 1100 aaPredicted RBP12.14□□□□□ -0.47
USP43-205ENST00000574408 CYP2D6P10635 497 aa12.14□□□□□ -0.47
USP43-205ENST00000574408 SEC23AQ15436 765 aa12.14□□□□□ -0.47
USP43-205ENST00000574408 DIXDC1Q155Q3 683 aa12.14□□□□□ -0.47
USP43-205ENST00000574408 TRIM22Q8IYM9 498 aa12.14□□□□□ -0.47
USP43-205ENST00000574408 ENAHQ8N8S7 591 aaPredicted RBP12.14□□□□□ -0.47
USP43-205ENST00000574408 LINC00301Q8NCQ3 95 aa12.14□□□□□ -0.47
USP43-205ENST00000574408 ZSCAN10Q96SZ4 725 aaPredicted RBP12.14□□□□□ -0.47
USP43-205ENST00000574408 ATP8A2Q9NTI2 1148 aa12.14□□□□□ -0.47
USP43-205ENST00000574408 GGA1Q9UJY5 639 aa12.14□□□□□ -0.47
USP43-205ENST00000574408 PCDHA7Q9UN72 937 aa12.14□□□□□ -0.47
USP43-205ENST00000574408 STK36Q9NRP7 1315 aa12.14□□□□□ -0.47
USP43-205ENST00000574408 CCDC196A0A1B0GTZ2 297 aa12.14□□□□□ -0.47
USP43-205ENST00000574408 GRIK5Q16478 980 aa12.14□□□□□ -0.47
USP43-205ENST00000574408 IQCA1Q86XH1 822 aa12.14□□□□□ -0.47
USP43-205ENST00000574408 FANCBQ8NB91 859 aa12.14□□□□□ -0.47
USP43-205ENST00000574408 POLR3EQ9NVU0 708 aa12.14□□□□□ -0.47
USP43-205ENST00000574408 MYH2Q9UKX2 1941 aa12.14□□□□□ -0.47
USP43-205ENST00000574408 NID2Q14112 1375 aa12.14□□□□□ -0.47
USP43-205ENST00000574408 GUCY1A2P33402 732 aa12.14□□□□□ -0.47
USP43-205ENST00000574408 SPTLC2O15270 562 aa12.13□□□□□ -0.47
USP43-205ENST00000574408 BBOX1O75936 387 aa12.13□□□□□ -0.47
USP43-205ENST00000574408 YEATS4O95619 227 aa12.13□□□□□ -0.47
USP43-205ENST00000574408 ATP2B4P23634 1241 aa12.13□□□□□ -0.47
USP43-205ENST00000574408 IFIT1BQ5T764 474 aaKnown RBP12.13□□□□□ -0.47
USP43-205ENST00000574408 ANO1Q5XXA6 986 aa12.13□□□□□ -0.47
USP43-205ENST00000574408 RBM43Q6ZSC3 357 aaKnown RBP12.13□□□□□ -0.47
USP43-205ENST00000574408 KCNG4Q8TDN1 519 aa12.13□□□□□ -0.47
USP43-205ENST00000574408 WASF1Q92558 559 aa12.13□□□□□ -0.47
USP43-205ENST00000574408 MCM9Q9NXL9 1143 aa12.13□□□□□ -0.47
USP43-205ENST00000574408 MRVI1Q9Y6F6 885 aa12.13□□□□□ -0.47
USP43-205ENST00000574408 DUOX1Q9NRD9 1551 aa12.13□□□□□ -0.47
USP43-205ENST00000574408 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.13□□□□□ -0.47
USP43-205ENST00000574408 KINO60870 393 aaKnown RBP12.13□□□□□ -0.47
USP43-205ENST00000574408 PCP11498 1178 aaKnown RBP12.13□□□□□ -0.47
USP43-205ENST00000574408 ZNF827Q17R98 1081 aa12.13□□□□□ -0.47
USP43-205ENST00000574408 CD209Q9NNX6 404 aa12.13□□□□□ -0.47
USP43-205ENST00000574408 ARPP21Q9UBL0 812 aaPredicted RBP12.13□□□□□ -0.47
USP43-205ENST00000574408 SLC3A2P08195 630 aaKnown RBP12.12□□□□□ -0.47
USP43-205ENST00000574408 USP5P45974 858 aa12.12□□□□□ -0.47
USP43-205ENST00000574408 RCAN1P53805 252 aa12.12□□□□□ -0.47
USP43-205ENST00000574408 RBM6P78332 1123 aaKnown RBP12.12□□□□□ -0.47
USP43-205ENST00000574408 FAM160A1Q05DH4 1040 aa12.12□□□□□ -0.47
USP43-205ENST00000574408 TMED8Q6PL24 325 aaPredicted RBP12.12□□□□□ -0.47
USP43-205ENST00000574408 SASS6Q6UVJ0 657 aa12.12□□□□□ -0.47
USP43-205ENST00000574408 C15orf52Q6ZUT6 534 aaKnown RBP12.12□□□□□ -0.47
USP43-205ENST00000574408 RGS22Q8NE09 1264 aa12.12□□□□□ -0.47
USP43-205ENST00000574408 MRPS27Q92552 414 aaKnown RBP12.12□□□□□ -0.47
USP43-205ENST00000574408 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.12□□□□□ -0.47
USP43-205ENST00000574408 ZBTB22O15209 634 aa12.12□□□□□ -0.47
USP43-205ENST00000574408 FGRP09769 529 aa12.12□□□□□ -0.47
USP43-205ENST00000574408 USP17L8P0C7I0 530 aa12.12□□□□□ -0.47
USP43-205ENST00000574408 FAM47AQ5JRC9 791 aa12.12□□□□□ -0.47
USP43-205ENST00000574408 ADALQ6DHV7 355 aa12.12□□□□□ -0.47
USP43-205ENST00000574408 CRACR2BQ8N4Y2 399 aaPredicted RBP12.12□□□□□ -0.47
USP43-205ENST00000574408 FAM200AQ8TCP9 573 aa12.12□□□□□ -0.47
USP43-205ENST00000574408 CCDC88AQ3V6T2 1871 aa12.12□□□□□ -0.47
USP43-205ENST00000574408 C6orf229H3BNL8 230 aa12.12□□□□□ -0.47
USP43-205ENST00000574408 APBA3O96018 575 aa12.12□□□□□ -0.47
USP43-205ENST00000574408 HOXA10P31260 410 aaPredicted RBP12.12□□□□□ -0.47
USP43-205ENST00000574408 GSTO1P78417 241 aa12.12□□□□□ -0.47
USP43-205ENST00000574408 SNW1Q13573 536 aaKnown RBP12.12□□□□□ -0.47
USP43-205ENST00000574408 ANO6Q4KMQ2 910 aa12.12□□□□□ -0.47
USP43-205ENST00000574408 CATIPQ7Z7H3 387 aa12.12□□□□□ -0.47
USP43-205ENST00000574408 ZSCAN30Q86W11 494 aa12.12□□□□□ -0.47
USP43-205ENST00000574408 SH3RF3Q8TEJ3 882 aaPredicted RBP12.12□□□□□ -0.47
USP43-205ENST00000574408 A0A1B0GVL5 298 aa12.11□□□□□ -0.47
USP43-205ENST00000574408 ORC4O43929 436 aa12.11□□□□□ -0.47
USP43-205ENST00000574408 DEXIO95424 95 aa12.11□□□□□ -0.47
USP43-205ENST00000574408 ENGASEQ8NFI3 743 aa12.11□□□□□ -0.47
USP43-205ENST00000574408 CRAMP1Q96RY5 1269 aa12.11□□□□□ -0.47
USP43-205ENST00000574408 NOL10Q9BSC4 688 aaKnown RBP12.11□□□□□ -0.47
USP43-205ENST00000574408 KCNJ14Q9UNX9 436 aa12.11□□□□□ -0.47
USP43-205ENST00000574408 MAST2Q6P0Q8 1798 aa12.11□□□□□ -0.47
USP43-205ENST00000574408 NMT2O60551 498 aa12.11□□□□□ -0.47
USP43-205ENST00000574408 ADCY5O95622 1261 aa12.11□□□□□ -0.47
USP43-205ENST00000574408 BAG3O95817 575 aa12.11□□□□□ -0.47
USP43-205ENST00000574408 MARCKSP29966 332 aaPredicted RBP12.11□□□□□ -0.47
USP43-205ENST00000574408 PDE4BQ07343 736 aa12.11□□□□□ -0.47
USP43-205ENST00000574408 SAFBQ15424 915 aaKnown RBP eCLIP12.11□□□□□ -0.47
USP43-205ENST00000574408 SBK1Q52WX2 424 aa12.11□□□□□ -0.47
USP43-205ENST00000574408 NBPF11Q86T75 865 aa12.11□□□□□ -0.47
USP43-205ENST00000574408 TBC1D16Q8TBP0 767 aa12.11□□□□□ -0.47
USP43-205ENST00000574408 POLLQ9UGP5 575 aa12.11□□□□□ -0.47
USP43-205ENST00000574408 A0A1W2PQ27 194 aa12.11□□□□□ -0.47
USP43-205ENST00000574408 A0A1W2PQ64 194 aa12.11□□□□□ -0.47
USP43-205ENST00000574408 A0A1W2PQD8 194 aa12.11□□□□□ -0.47
USP43-205ENST00000574408 AKAP17AQ02040 695 aaKnown RBP12.11□□□□□ -0.47
USP43-205ENST00000574408 HS1BP3Q53T59 392 aa12.11□□□□□ -0.47
USP43-205ENST00000574408 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.11□□□□□ -0.47
USP43-205ENST00000574408 LDHCP07864 332 aa12.1□□□□□ -0.47
USP43-205ENST00000574408 U2AF2P26368 475 aaKnown RBP eCLIP12.1□□□□□ -0.47
USP43-205ENST00000574408 CLCN1P35523 988 aa12.1□□□□□ -0.47
USP43-205ENST00000574408 COL23A1Q86Y22 540 aaPredicted RBP12.1□□□□□ -0.47
USP43-205ENST00000574408 DIS3L2Q8IYB7 885 aaKnown RBP12.1□□□□□ -0.47
USP43-205ENST00000574408 ECM29Q5VYK3 1845 aa12.1□□□□□ -0.47
USP43-205ENST00000574408 TSPY2A6NKD2 308 aa12.1□□□□□ -0.47
USP43-205ENST00000574408 BTBD18B2RXH4 712 aa12.1□□□□□ -0.47
USP43-205ENST00000574408 CTAGE5O15320 804 aa12.1□□□□□ -0.47
USP43-205ENST00000574408 HMGB2P26583 209 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms