RNA–Protein interactions for RNA: ENST00000574137.1

NUBP1-206, Transcript of nucleotide binding protein 1, humanhuman

TSL 1 (best)

Gene NUBP1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1-206ENST00000574137 GPAT2Q6NUI2 795 aa16.64■□□□□ 0.25
NUBP1-206ENST00000574137 PRRT2Q7Z6L0 340 aaPredicted RBP16.64■□□□□ 0.25
NUBP1-206ENST00000574137 RPAP2Q8IXW5 612 aaPredicted RBP16.64■□□□□ 0.25
NUBP1-206ENST00000574137 RHPN1Q8TCX5 695 aa16.64■□□□□ 0.25
NUBP1-206ENST00000574137 ARMC5Q96C12 935 aa16.64■□□□□ 0.25
NUBP1-206ENST00000574137 TRIM34Q9BYJ4 488 aa16.64■□□□□ 0.25
NUBP1-206ENST00000574137 DHX36Q9H2U1 1008 aaKnown RBP16.64■□□□□ 0.25
NUBP1-206ENST00000574137 CHMP4BQ9H444 224 aaKnown RBP16.64■□□□□ 0.25
NUBP1-206ENST00000574137 NDUFB9Q9Y6M9 179 aa16.64■□□□□ 0.25
NUBP1-206ENST00000574137 CENPFP49454 3210 aa16.63■□□□□ 0.25
NUBP1-206ENST00000574137 FMNL1O95466 1100 aaPredicted RBP16.63■□□□□ 0.25
NUBP1-206ENST00000574137 GNRH1P01148 92 aa16.63■□□□□ 0.25
NUBP1-206ENST00000574137 HOXD10P28358 340 aa16.63■□□□□ 0.25
NUBP1-206ENST00000574137 ADGRA1Q86SQ6 560 aa16.63■□□□□ 0.25
NUBP1-206ENST00000574137 CLASRPQ8N2M8 674 aaKnown RBP16.63■□□□□ 0.25
NUBP1-206ENST00000574137 TMEM106CQ9BVX2 250 aa16.63■□□□□ 0.25
NUBP1-206ENST00000574137 HERC5Q9UII4 1024 aaKnown RBP16.63■□□□□ 0.25
NUBP1-206ENST00000574137 TNRC18O15417 2968 aaPredicted RBP16.62■□□□□ 0.25
NUBP1-206ENST00000574137 POTEFA5A3E0 1075 aa16.62■□□□□ 0.25
NUBP1-206ENST00000574137 MYCP01106 439 aaPredicted RBP16.62■□□□□ 0.25
NUBP1-206ENST00000574137 CENPBP07199 599 aaPredicted RBP16.62■□□□□ 0.25
NUBP1-206ENST00000574137 DYNLL1P63167 89 aaKnown RBP16.62■□□□□ 0.25
NUBP1-206ENST00000574137 MAP3K12Q12852 859 aa16.62■□□□□ 0.25
NUBP1-206ENST00000574137 CRACR2BQ8N4Y2 399 aaPredicted RBP16.62■□□□□ 0.25
NUBP1-206ENST00000574137 MAGEB6Q8N7X4 407 aa16.62■□□□□ 0.25
NUBP1-206ENST00000574137 KIF1BPQ96EK5 621 aa16.62■□□□□ 0.25
NUBP1-206ENST00000574137 ZBTB40Q9NUA8 1239 aa16.62■□□□□ 0.25
NUBP1-206ENST00000574137 SAP30BPQ9UHR5 308 aaKnown RBP16.62■□□□□ 0.25
NUBP1-206ENST00000574137 MYO5AQ9Y4I1 1855 aaKnown RBP16.62■□□□□ 0.25
NUBP1-206ENST00000574137 FLT1P17948 1338 aa16.62■□□□□ 0.25
NUBP1-206ENST00000574137 COL2A1P02458 1487 aaPredicted RBP16.61■□□□□ 0.25
NUBP1-206ENST00000574137 DOCK1Q14185 1865 aa16.61■□□□□ 0.25
NUBP1-206ENST00000574137 IFIT2P09913 472 aaKnown RBP16.61■□□□□ 0.25
NUBP1-206ENST00000574137 CAP2P40123 477 aa16.61■□□□□ 0.25
NUBP1-206ENST00000574137 USP5P45974 858 aa16.61■□□□□ 0.25
NUBP1-206ENST00000574137 PRMT2P55345 433 aa16.61■□□□□ 0.25
NUBP1-206ENST00000574137 SPP2Q13103 211 aa16.61■□□□□ 0.25
NUBP1-206ENST00000574137 SLC4A8Q2Y0W8 1093 aa16.61■□□□□ 0.25
NUBP1-206ENST00000574137 MIGA1Q8NAN2 632 aa16.61■□□□□ 0.25
NUBP1-206ENST00000574137 SMCR8Q8TEV9 937 aaPredicted RBP16.61■□□□□ 0.25
NUBP1-206ENST00000574137 ANTXR1Q9H6X2 564 aa16.61■□□□□ 0.25
NUBP1-206ENST00000574137 PALD1Q9ULE6 856 aa16.61■□□□□ 0.25
NUBP1-206ENST00000574137 USP17L5A8MUK1 530 aa16.6■□□□□ 0.25
NUBP1-206ENST00000574137 HLA-DOAP06340 250 aa16.6■□□□□ 0.25
NUBP1-206ENST00000574137 FOXP4Q8IVH2 680 aaPredicted RBP16.6■□□□□ 0.25
NUBP1-206ENST00000574137 ZNF280CQ8ND82 737 aa16.6■□□□□ 0.25
NUBP1-206ENST00000574137 RAET1EQ8TD07 263 aa16.6■□□□□ 0.25
NUBP1-206ENST00000574137 SH3TC2Q8TF17 1288 aa16.6■□□□□ 0.25
NUBP1-206ENST00000574137 ZNF333Q96JL9 665 aa16.6■□□□□ 0.25
NUBP1-206ENST00000574137 TRIM47Q96LD4 638 aa16.6■□□□□ 0.25
NUBP1-206ENST00000574137 SLC45A1Q9Y2W3 748 aa16.6■□□□□ 0.25
NUBP1-206ENST00000574137 ADGRA2Q96PE1 1338 aa16.6■□□□□ 0.25
NUBP1-206ENST00000574137 MAST2Q6P0Q8 1798 aa16.59■□□□□ 0.25
NUBP1-206ENST00000574137 RAB11FIP3O75154 756 aa16.59■□□□□ 0.25
NUBP1-206ENST00000574137 BCRP11274 1271 aa16.59■□□□□ 0.25
NUBP1-206ENST00000574137 CTGFP29279 349 aa16.59■□□□□ 0.25
NUBP1-206ENST00000574137 FCGRTP55899 365 aa16.59■□□□□ 0.25
NUBP1-206ENST00000574137 RRP1BQ14684 758 aaKnown RBP16.59■□□□□ 0.25
NUBP1-206ENST00000574137 TTF1Q15361 905 aaPredicted RBP16.59■□□□□ 0.25
NUBP1-206ENST00000574137 SIRT2Q8IXJ6 389 aa16.59■□□□□ 0.25
NUBP1-206ENST00000574137 TBC1D2Q9BYX2 928 aa16.59■□□□□ 0.25
NUBP1-206ENST00000574137 AS3MTQ9HBK9 375 aa16.59■□□□□ 0.25
NUBP1-206ENST00000574137 SRRDQ9UH36 339 aa16.59■□□□□ 0.25
NUBP1-206ENST00000574137 AGTPBP1Q9UPW5 1226 aa16.59■□□□□ 0.25
NUBP1-206ENST00000574137 ZSWIM8A7E2V4 1837 aa16.59■□□□□ 0.25
NUBP1-206ENST00000574137 EN2P19622 333 aaPredicted RBP16.58■□□□□ 0.24
NUBP1-206ENST00000574137 OSBPP22059 807 aa16.58■□□□□ 0.24
NUBP1-206ENST00000574137 CERS3Q8IU89 383 aa16.58■□□□□ 0.24
NUBP1-206ENST00000574137 DNAJC2Q99543 621 aaKnown RBP16.58■□□□□ 0.24
NUBP1-206ENST00000574137 PNMA3Q9UL41 463 aa16.58■□□□□ 0.24
NUBP1-206ENST00000574137 MYPNQ86TC9 1320 aa16.58■□□□□ 0.24
NUBP1-206ENST00000574137 PHIPQ8WWQ0 1821 aa16.57■□□□□ 0.24
NUBP1-206ENST00000574137 ASNSP08243 561 aa16.57■□□□□ 0.24
NUBP1-206ENST00000574137 HMGCS2P54868 508 aa16.57■□□□□ 0.24
NUBP1-206ENST00000574137 PABPC4Q13310 644 aaKnown RBP eCLIP16.57■□□□□ 0.24
NUBP1-206ENST00000574137 PDE3AQ14432 1141 aa16.57■□□□□ 0.24
NUBP1-206ENST00000574137 TREML2Q5T2D2 321 aa16.57■□□□□ 0.24
NUBP1-206ENST00000574137 C20orf194Q5TEA3 1177 aa16.57■□□□□ 0.24
NUBP1-206ENST00000574137 PROCA1Q8NCQ7 364 aaPredicted RBP16.57■□□□□ 0.24
NUBP1-206ENST00000574137 BIN2Q9UBW5 565 aaPredicted RBP16.57■□□□□ 0.24
NUBP1-206ENST00000574137 PTPRFP10586 1907 aa16.57■□□□□ 0.24
NUBP1-206ENST00000574137 GDF11O95390 407 aa16.56■□□□□ 0.24
NUBP1-206ENST00000574137 SLC9C2Q5TAH2 1124 aa16.56■□□□□ 0.24
NUBP1-206ENST00000574137 TMED8Q6PL24 325 aaPredicted RBP16.56■□□□□ 0.24
NUBP1-206ENST00000574137 ANKRD13CQ8N6S4 541 aa16.56■□□□□ 0.24
NUBP1-206ENST00000574137 TMOD4Q9NZQ9 345 aa16.56■□□□□ 0.24
NUBP1-206ENST00000574137 ATAD5Q96QE3 1844 aa16.55■□□□□ 0.24
NUBP1-206ENST00000574137 MAGEB6P1A0A0J9YX57 407 aa16.55■□□□□ 0.24
NUBP1-206ENST00000574137 GOLIM4O00461 696 aa16.55■□□□□ 0.24
NUBP1-206ENST00000574137 GRK4P32298 578 aa16.55■□□□□ 0.24
NUBP1-206ENST00000574137 PRKCZQ05513 592 aa16.55■□□□□ 0.24
NUBP1-206ENST00000574137 METTL16Q86W50 562 aaKnown RBP16.55■□□□□ 0.24
NUBP1-206ENST00000574137 DNAJC18Q9H819 358 aa16.55■□□□□ 0.24
NUBP1-206ENST00000574137 CDK5RAP2Q96SN8 1893 aa16.54■□□□□ 0.24
NUBP1-206ENST00000574137 TNPO2O14787 897 aaKnown RBP16.54■□□□□ 0.24
NUBP1-206ENST00000574137 PDE6AP16499 860 aa16.54■□□□□ 0.24
NUBP1-206ENST00000574137 MTMR2Q13614 643 aa16.54■□□□□ 0.24
NUBP1-206ENST00000574137 PRPF38BQ5VTL8 546 aaKnown RBP16.54■□□□□ 0.24
NUBP1-206ENST00000574137 TTC6Q86TZ1 520 aa16.54■□□□□ 0.24
NUBP1-206ENST00000574137 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms