RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, human

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPLOC4-208	ENST00000572351	MKRN1	Q9UHC7	482 aa	Known RBP	11.24	□□□□□ -0.61
NPLOC4-208	ENST00000572351	SERPINB13	Q9UIV8	391 aa		11.24	□□□□□ -0.61
NPLOC4-208	ENST00000572351	CELF2	O95319	508 aa	Known RBP	11.23	□□□□□ -0.61
NPLOC4-208	ENST00000572351	MCC	P23508	829 aa		11.23	□□□□□ -0.61
NPLOC4-208	ENST00000572351	PLCD1	P51178	756 aa		11.23	□□□□□ -0.61
NPLOC4-208	ENST00000572351	HAND2	P61296	217 aa		11.23	□□□□□ -0.61
NPLOC4-208	ENST00000572351	C8orf34	Q49A92	452 aa		11.23	□□□□□ -0.61
NPLOC4-208	ENST00000572351	SBK1	Q52WX2	424 aa		11.23	□□□□□ -0.61
NPLOC4-208	ENST00000572351	RNF20	Q5VTR2	975 aa		11.23	□□□□□ -0.61
NPLOC4-208	ENST00000572351	FOXP4	Q8IVH2	680 aa	Predicted RBP	11.23	□□□□□ -0.61
NPLOC4-208	ENST00000572351	MAP4K1	Q92918	833 aa		11.23	□□□□□ -0.61
NPLOC4-208	ENST00000572351	ZNF341	Q9BYN7	854 aa		11.23	□□□□□ -0.61
NPLOC4-208	ENST00000572351	EHD4	Q9H223	541 aa		11.23	□□□□□ -0.61
NPLOC4-208	ENST00000572351	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
NPLOC4-208	ENST00000572351	ZNF287	Q9HBT7	754 aa		11.23	□□□□□ -0.61
NPLOC4-208	ENST00000572351	HERC5	Q9UII4	1024 aa	Known RBP	11.23	□□□□□ -0.61
NPLOC4-208	ENST00000572351	RBM8A	Q9Y5S9	174 aa	Known RBP	11.23	□□□□□ -0.61
NPLOC4-208	ENST00000572351	ZMYM6	O95789	1325 aa		11.23	□□□□□ -0.61
NPLOC4-208	ENST00000572351	COL2A1	P02458	1487 aa	Predicted RBP	11.23	□□□□□ -0.61
NPLOC4-208	ENST00000572351	FAM196B	A6NMK8	535 aa		11.22	□□□□□ -0.61
NPLOC4-208	ENST00000572351	ITGBL1	O95965	494 aa	Predicted RBP	11.22	□□□□□ -0.61
NPLOC4-208	ENST00000572351	IREB2	P48200	963 aa	Known RBP	11.22	□□□□□ -0.61
NPLOC4-208	ENST00000572351	PDE4B	Q07343	736 aa		11.22	□□□□□ -0.61
NPLOC4-208	ENST00000572351	ARMC9	Q7Z3E5	817 aa		11.22	□□□□□ -0.61
NPLOC4-208	ENST00000572351	C2orf69	Q8N8R5	385 aa		11.22	□□□□□ -0.61
NPLOC4-208	ENST00000572351	DYNLL2	Q96FJ2	89 aa		11.22	□□□□□ -0.61
NPLOC4-208	ENST00000572351	UPF2	Q9HAU5	1272 aa	Known RBP	11.22	□□□□□ -0.61
NPLOC4-208	ENST00000572351	MKNK2	Q9HBH9	465 aa		11.22	□□□□□ -0.61
NPLOC4-208	ENST00000572351	TOMM22	Q9NS69	142 aa		11.22	□□□□□ -0.61
NPLOC4-208	ENST00000572351	SWAP70	Q9UH65	585 aa		11.22	□□□□□ -0.61
NPLOC4-208	ENST00000572351	TBC1D12	O60347	775 aa		11.21	□□□□□ -0.61
NPLOC4-208	ENST00000572351	EVX2	Q03828	476 aa		11.21	□□□□□ -0.61
NPLOC4-208	ENST00000572351	CTDSPL2	Q05D32	466 aa		11.21	□□□□□ -0.61
NPLOC4-208	ENST00000572351	FMR1	Q06787	632 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
NPLOC4-208	ENST00000572351	MKRN4P	Q13434	485 aa	Predicted RBP	11.21	□□□□□ -0.61
NPLOC4-208	ENST00000572351	MFSD6	Q6ZSS7	791 aa		11.21	□□□□□ -0.61
NPLOC4-208	ENST00000572351	WRNIP1	Q96S55	665 aa		11.21	□□□□□ -0.61
NPLOC4-208	ENST00000572351	RNF41	Q9H4P4	317 aa	Predicted RBP	11.21	□□□□□ -0.61
NPLOC4-208	ENST00000572351	GBA2	Q9HCG7	927 aa	Predicted RBP	11.21	□□□□□ -0.61
NPLOC4-208	ENST00000572351	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.21	□□□□□ -0.61
NPLOC4-208	ENST00000572351	ANGEL1	Q9UNK9	670 aa	Known RBP	11.21	□□□□□ -0.61
NPLOC4-208	ENST00000572351	MPHOSPH10	O00566	681 aa	Known RBP	11.2	□□□□□ -0.62
NPLOC4-208	ENST00000572351	EPB41L2	O43491	1005 aa	Known RBP	11.2	□□□□□ -0.62
NPLOC4-208	ENST00000572351	PRDM1	O75626	825 aa		11.2	□□□□□ -0.62
NPLOC4-208	ENST00000572351	SLURP2	P0DP57	97 aa		11.2	□□□□□ -0.62
NPLOC4-208	ENST00000572351	ZKSCAN1	P17029	563 aa	Predicted RBP	11.2	□□□□□ -0.62
NPLOC4-208	ENST00000572351	TRDN	Q13061	729 aa		11.2	□□□□□ -0.62
NPLOC4-208	ENST00000572351	RRP12	Q5JTH9	1297 aa	Known RBP	11.2	□□□□□ -0.62
NPLOC4-208	ENST00000572351	CREB3L3	Q68CJ9	461 aa		11.2	□□□□□ -0.62
NPLOC4-208	ENST00000572351	C16orf86	Q6ZW13	317 aa		11.2	□□□□□ -0.62
NPLOC4-208	ENST00000572351	SLC44A5	Q8NCS7	719 aa		11.2	□□□□□ -0.62
NPLOC4-208	ENST00000572351	ANAPC4	Q9UJX5	808 aa		11.2	□□□□□ -0.62
NPLOC4-208	ENST00000572351	TAOK2	Q9UL54	1235 aa		11.2	□□□□□ -0.62
NPLOC4-208	ENST00000572351	FZD1	Q9UP38	647 aa		11.2	□□□□□ -0.62
NPLOC4-208	ENST00000572351	MYH2	Q9UKX2	1941 aa		11.19	□□□□□ -0.62
NPLOC4-208	ENST00000572351	PASK	Q96RG2	1323 aa		11.19	□□□□□ -0.62
NPLOC4-208	ENST00000572351	SMIM22	K7EJ46	135 aa		11.19	□□□□□ -0.62
NPLOC4-208	ENST00000572351	SLC27A2	O14975	620 aa		11.19	□□□□□ -0.62
NPLOC4-208	ENST00000572351	CYP21A2	P08686	494 aa		11.19	□□□□□ -0.62
NPLOC4-208	ENST00000572351	PC	P11498	1178 aa	Known RBP	11.19	□□□□□ -0.62
NPLOC4-208	ENST00000572351	SHMT1	P34896	483 aa		11.19	□□□□□ -0.62
NPLOC4-208	ENST00000572351	CDK8	P49336	464 aa		11.19	□□□□□ -0.62
NPLOC4-208	ENST00000572351	FKBP1B	P68106	108 aa		11.19	□□□□□ -0.62
NPLOC4-208	ENST00000572351	GABPA	Q06546	454 aa		11.19	□□□□□ -0.62
NPLOC4-208	ENST00000572351	CERKL	Q49MI3	558 aa	Predicted RBP	11.19	□□□□□ -0.62
NPLOC4-208	ENST00000572351	AKNAD1	Q5T1N1	836 aa		11.19	□□□□□ -0.62
NPLOC4-208	ENST00000572351	RALYL	Q86SE5	291 aa	Known RBP	11.19	□□□□□ -0.62
NPLOC4-208	ENST00000572351	METTL16	Q86W50	562 aa	Known RBP	11.19	□□□□□ -0.62
NPLOC4-208	ENST00000572351	TBC1D10C	Q8IV04	446 aa		11.19	□□□□□ -0.62
NPLOC4-208	ENST00000572351	ZNF444	Q8N0Y2	327 aa	Predicted RBP	11.19	□□□□□ -0.62
NPLOC4-208	ENST00000572351	USP26	Q9BXU7	913 aa		11.19	□□□□□ -0.62
NPLOC4-208	ENST00000572351	CABP5	Q9NP86	173 aa		11.19	□□□□□ -0.62
NPLOC4-208	ENST00000572351	ABT1	Q9ULW3	272 aa	Known RBP	11.19	□□□□□ -0.62
NPLOC4-208	ENST00000572351	CSAD	Q9Y600	493 aa		11.19	□□□□□ -0.62
NPLOC4-208	ENST00000572351	ROBO3	Q96MS0	1386 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	TMEM88B	A6NKF7	163 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	UBE2Q2L	H0YL09	131 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	RANBP6	O60518	1105 aa	Known RBP	11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	USP2	O75604	605 aa	Predicted RBP	11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	GDF11	O95390	407 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	SEC24B	O95487	1268 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	TSPY3	P0CV98	308 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	TSPY8	P0CW00	308 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	HSPA4	P34932	840 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	MAP3K9	P80192	1104 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	MAP3K10	Q02779	954 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	NECTIN1	Q15223	517 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	ABCB5	Q2M3G0	1257 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	MOB2	Q70IA6	237 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	ANKRD13A	Q8IZ07	590 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	STAG1	Q8WVM7	1258 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	KLRG1	Q96E93	195 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	KRT23	Q9C075	422 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	DNAJC18	Q9H819	358 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	CNNM2	Q9H8M5	875 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	PICK1	Q9NRD5	415 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	SSC5D	A1L4H1	1573 aa		11.18	□□□□□ -0.62
NPLOC4-208	ENST00000572351	TSPY2	A6NKD2	308 aa		11.17	□□□□□ -0.62
NPLOC4-208	ENST00000572351	CTNND1	O60716	968 aa	Known RBP	11.17	□□□□□ -0.62
NPLOC4-208	ENST00000572351	INPP5B	P32019	993 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms