RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 FKTNO75072 461 aa17.66■□□□□ 0.42
LITAF-208ENST00000571627 SLFNL1Q499Z3 407 aa17.66■□□□□ 0.42
LITAF-208ENST00000571627 NOM1Q5C9Z4 860 aaKnown RBP17.66■□□□□ 0.42
LITAF-208ENST00000571627 TSHZ3Q63HK5 1081 aa17.66■□□□□ 0.42
LITAF-208ENST00000571627 CTU1Q7Z7A3 348 aaKnown RBP17.66■□□□□ 0.42
LITAF-208ENST00000571627 HAUS7Q99871 368 aa17.66■□□□□ 0.42
LITAF-208ENST00000571627 PICK1Q9NRD5 415 aa17.66■□□□□ 0.42
LITAF-208ENST00000571627 KCNH4Q9UQ05 1017 aa17.66■□□□□ 0.42
LITAF-208ENST00000571627 ZNF532Q9HCE3 1301 aa17.66■□□□□ 0.42
LITAF-208ENST00000571627 TBC1D12O60347 775 aa17.65■□□□□ 0.42
LITAF-208ENST00000571627 CTNND1O60716 968 aaKnown RBP17.65■□□□□ 0.42
LITAF-208ENST00000571627 PTPRAP18433 802 aa17.65■□□□□ 0.42
LITAF-208ENST00000571627 USP5P45974 858 aa17.65■□□□□ 0.42
LITAF-208ENST00000571627 RRP1BQ14684 758 aaKnown RBP17.65■□□□□ 0.42
LITAF-208ENST00000571627 TAF1CQ15572 869 aaPredicted RBP17.65■□□□□ 0.42
LITAF-208ENST00000571627 ZHX2Q9Y6X8 837 aa17.65■□□□□ 0.42
LITAF-208ENST00000571627 ZSWIM8A7E2V4 1837 aa17.64■□□□□ 0.41
LITAF-208ENST00000571627 MAGEB6P1A0A0J9YX57 407 aa17.64■□□□□ 0.41
LITAF-208ENST00000571627 TCRBV5S4A2TA0A5A2 114 aa17.64■□□□□ 0.41
LITAF-208ENST00000571627 CHGBP05060 677 aa17.64■□□□□ 0.41
LITAF-208ENST00000571627 RIOK1Q9BRS2 568 aaKnown RBP17.64■□□□□ 0.41
LITAF-208ENST00000571627 DHX36Q9H2U1 1008 aaKnown RBP17.64■□□□□ 0.41
LITAF-208ENST00000571627 DNAJC18Q9H819 358 aa17.64■□□□□ 0.41
LITAF-208ENST00000571627 ECHDC1Q9NTX5 307 aa17.64■□□□□ 0.41
LITAF-208ENST00000571627 PI4KBQ9UBF8 816 aa17.64■□□□□ 0.41
LITAF-208ENST00000571627 MOGSQ13724 837 aa17.63■□□□□ 0.41
LITAF-208ENST00000571627 TMED8Q6PL24 325 aaPredicted RBP17.63■□□□□ 0.41
LITAF-208ENST00000571627 CERS3Q8IU89 383 aa17.63■□□□□ 0.41
LITAF-208ENST00000571627 HERC5Q9UII4 1024 aaKnown RBP17.63■□□□□ 0.41
LITAF-208ENST00000571627 BAZ2AQ9UIF9 1905 aaKnown RBP17.62■□□□□ 0.41
LITAF-208ENST00000571627 CRACR2BQ8N4Y2 399 aaPredicted RBP17.62■□□□□ 0.41
LITAF-208ENST00000571627 OTUD7AQ8TE49 926 aaPredicted RBP17.62■□□□□ 0.41
LITAF-208ENST00000571627 ZFYVE28Q9HCC9 887 aa17.62■□□□□ 0.41
LITAF-208ENST00000571627 AFG3L2Q9Y4W6 797 aa17.62■□□□□ 0.41
LITAF-208ENST00000571627 TRIM75PA6NK02 468 aa17.61■□□□□ 0.41
LITAF-208ENST00000571627 CCDC85CA6NKD9 419 aa17.61■□□□□ 0.41
LITAF-208ENST00000571627 CXCL11O14625 94 aa17.61■□□□□ 0.41
LITAF-208ENST00000571627 HLA-DOAP06340 250 aa17.61■□□□□ 0.41
LITAF-208ENST00000571627 ADD2P35612 726 aa17.61■□□□□ 0.41
LITAF-208ENST00000571627 CAP2P40123 477 aa17.61■□□□□ 0.41
LITAF-208ENST00000571627 SHROOM1Q2M3G4 852 aaPredicted RBP17.61■□□□□ 0.41
LITAF-208ENST00000571627 LCORLQ8N3X6 602 aa17.61■□□□□ 0.41
LITAF-208ENST00000571627 CD99L2Q8TCZ2 262 aa17.61■□□□□ 0.41
LITAF-208ENST00000571627 GPATCH3Q96I76 525 aa17.61■□□□□ 0.41
LITAF-208ENST00000571627 TRIM34Q9BYJ4 488 aa17.61■□□□□ 0.41
LITAF-208ENST00000571627 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.61■□□□□ 0.41
LITAF-208ENST00000571627 LOC285556D6RIA3 1793 aa17.61■□□□□ 0.41
LITAF-208ENST00000571627 HTTP42858 3142 aa17.6■□□□□ 0.41
LITAF-208ENST00000571627 A0A0G2JLL6 359 aaPredicted RBP17.6■□□□□ 0.41
LITAF-208ENST00000571627 PDHXO00330 501 aa17.6■□□□□ 0.41
LITAF-208ENST00000571627 JAG1P78504 1218 aa17.6■□□□□ 0.41
LITAF-208ENST00000571627 CAP1Q01518 475 aa17.6■□□□□ 0.41
LITAF-208ENST00000571627 GADL1Q6ZQY3 521 aa17.6■□□□□ 0.41
LITAF-208ENST00000571627 PRRT2Q7Z6L0 340 aaPredicted RBP17.6■□□□□ 0.41
LITAF-208ENST00000571627 ANKRD23Q86SG2 305 aa17.6■□□□□ 0.41
LITAF-208ENST00000571627 METTL16Q86W50 562 aaKnown RBP17.6■□□□□ 0.41
LITAF-208ENST00000571627 CRNKL1Q9BZJ0 848 aaKnown RBP17.6■□□□□ 0.41
LITAF-208ENST00000571627 ARMT1Q9H993 441 aa17.6■□□□□ 0.41
LITAF-208ENST00000571627 ZCCHC17Q9NP64 241 aaKnown RBP17.6■□□□□ 0.41
LITAF-208ENST00000571627 MBD4O95243 580 aa17.59■□□□□ 0.41
LITAF-208ENST00000571627 GDF11O95390 407 aa17.59■□□□□ 0.41
LITAF-208ENST00000571627 SP3Q02447 781 aa17.59■□□□□ 0.41
LITAF-208ENST00000571627 HDAC1Q13547 482 aaPredicted RBP17.59■□□□□ 0.41
LITAF-208ENST00000571627 GPAT2Q6NUI2 795 aa17.59■□□□□ 0.41
LITAF-208ENST00000571627 FOXP4Q8IVH2 680 aaPredicted RBP17.59■□□□□ 0.41
LITAF-208ENST00000571627 EXOC6Q8TAG9 804 aa17.59■□□□□ 0.41
LITAF-208ENST00000571627 SDR42E1Q8WUS8 393 aa17.59■□□□□ 0.41
LITAF-208ENST00000571627 TRIM17Q9Y577 477 aa17.59■□□□□ 0.41
LITAF-208ENST00000571627 MYH8P13535 1937 aa17.59■□□□□ 0.41
LITAF-208ENST00000571627 TLR2O60603 784 aa17.58■□□□□ 0.4
LITAF-208ENST00000571627 EVX2Q03828 476 aa17.58■□□□□ 0.4
LITAF-208ENST00000571627 OTOP1Q7RTM1 612 aa17.58■□□□□ 0.4
LITAF-208ENST00000571627 ERO1AQ96HE7 468 aa17.58■□□□□ 0.4
LITAF-208ENST00000571627 ADGRA2Q96PE1 1338 aa17.57■□□□□ 0.4
LITAF-208ENST00000571627 PRKAB2O43741 272 aa17.57■□□□□ 0.4
LITAF-208ENST00000571627 PLCD1P51178 756 aa17.57■□□□□ 0.4
LITAF-208ENST00000571627 SPP2Q13103 211 aa17.57■□□□□ 0.4
LITAF-208ENST00000571627 ANKRD45Q5TZF3 282 aa17.57■□□□□ 0.4
LITAF-208ENST00000571627 GCC1Q96CN9 775 aa17.57■□□□□ 0.4
LITAF-208ENST00000571627 CPA4Q9UI42 421 aa17.57■□□□□ 0.4
LITAF-208ENST00000571627 HPS5Q9UPZ3 1129 aa17.57■□□□□ 0.4
LITAF-208ENST00000571627 USP17L5A8MUK1 530 aa17.56■□□□□ 0.4
LITAF-208ENST00000571627 ECM2O94769 699 aaPredicted RBP17.56■□□□□ 0.4
LITAF-208ENST00000571627 POLR3DP05423 398 aaPredicted RBP17.56■□□□□ 0.4
LITAF-208ENST00000571627 CYP2C8P10632 490 aa17.56■□□□□ 0.4
LITAF-208ENST00000571627 CYP2D6P10635 497 aa17.56■□□□□ 0.4
LITAF-208ENST00000571627 UBE3CQ15386 1083 aa17.56■□□□□ 0.4
LITAF-208ENST00000571627 PKN2Q16513 984 aaKnown RBP17.56■□□□□ 0.4
LITAF-208ENST00000571627 FASTKD5Q7L8L6 764 aaKnown RBP17.56■□□□□ 0.4
LITAF-208ENST00000571627 ZNF280CQ8ND82 737 aa17.56■□□□□ 0.4
LITAF-208ENST00000571627 PI4K2BQ8TCG2 481 aa17.56■□□□□ 0.4
LITAF-208ENST00000571627 EHD4Q9H223 541 aa17.56■□□□□ 0.4
LITAF-208ENST00000571627 RWDD1Q9H446 243 aaPredicted RBP17.56■□□□□ 0.4
LITAF-208ENST00000571627 DCP1AQ9NPI6 582 aaPredicted RBP17.56■□□□□ 0.4
LITAF-208ENST00000571627 MCM9Q9NXL9 1143 aa17.56■□□□□ 0.4
LITAF-208ENST00000571627 ZBTB47Q9UFB7 747 aaPredicted RBP17.56■□□□□ 0.4
LITAF-208ENST00000571627 SERPINB13Q9UIV8 391 aa17.56■□□□□ 0.4
LITAF-208ENST00000571627 TTC41PQ6P2S7 1318 aa17.55■□□□□ 0.4
LITAF-208ENST00000571627 ASNSP08243 561 aa17.55■□□□□ 0.4
LITAF-208ENST00000571627 MX1P20591 662 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms