RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 GPAT2Q6NUI2 795 aa16.79■□□□□ 0.28
RAB40B-204ENST00000571554 RPAP2Q8IXW5 612 aaPredicted RBP16.79■□□□□ 0.28
RAB40B-204ENST00000571554 MAGEB6Q8N7X4 407 aa16.79■□□□□ 0.28
RAB40B-204ENST00000571554 ZCCHC17Q9NP64 241 aaKnown RBP16.79■□□□□ 0.28
RAB40B-204ENST00000571554 AFG3L2Q9Y4W6 797 aa16.79■□□□□ 0.28
RAB40B-204ENST00000571554 PTCH2Q9Y6C5 1203 aa16.79■□□□□ 0.28
RAB40B-204ENST00000571554 COL2A1P02458 1487 aaPredicted RBP16.79■□□□□ 0.28
RAB40B-204ENST00000571554 CENPFP49454 3210 aa16.79■□□□□ 0.28
RAB40B-204ENST00000571554 A0A0G2JLL6 359 aaPredicted RBP16.78■□□□□ 0.28
RAB40B-204ENST00000571554 CXCL11O14625 94 aa16.78■□□□□ 0.28
RAB40B-204ENST00000571554 HMMRO75330 724 aa16.78■□□□□ 0.28
RAB40B-204ENST00000571554 MAP4K4O95819 1239 aaPredicted RBP16.78■□□□□ 0.28
RAB40B-204ENST00000571554 PPP4CP60510 307 aa16.78■□□□□ 0.28
RAB40B-204ENST00000571554 LACTBP83111 547 aaPredicted RBP16.78■□□□□ 0.28
RAB40B-204ENST00000571554 PRRT2Q7Z6L0 340 aaPredicted RBP16.78■□□□□ 0.28
RAB40B-204ENST00000571554 ADGRA2Q96PE1 1338 aa16.77■□□□□ 0.28
RAB40B-204ENST00000571554 TBC1D12O60347 775 aa16.77■□□□□ 0.28
RAB40B-204ENST00000571554 MYCP01106 439 aaPredicted RBP16.77■□□□□ 0.28
RAB40B-204ENST00000571554 PLCG2P16885 1265 aa16.77■□□□□ 0.28
RAB40B-204ENST00000571554 CTGFP29279 349 aa16.77■□□□□ 0.28
RAB40B-204ENST00000571554 SHROOM1Q2M3G4 852 aaPredicted RBP16.77■□□□□ 0.28
RAB40B-204ENST00000571554 C17orf99Q6UX52 265 aa16.77■□□□□ 0.28
RAB40B-204ENST00000571554 CLASRPQ8N2M8 674 aaKnown RBP16.77■□□□□ 0.28
RAB40B-204ENST00000571554 KIF1BPQ96EK5 621 aa16.77■□□□□ 0.28
RAB40B-204ENST00000571554 PALD1Q9ULE6 856 aa16.77■□□□□ 0.28
RAB40B-204ENST00000571554 POTEFA5A3E0 1075 aa16.76■□□□□ 0.27
RAB40B-204ENST00000571554 IFIT2P09913 472 aaKnown RBP16.76■□□□□ 0.27
RAB40B-204ENST00000571554 KIF22Q14807 665 aa16.76■□□□□ 0.27
RAB40B-204ENST00000571554 PARK7Q99497 189 aaKnown RBP16.76■□□□□ 0.27
RAB40B-204ENST00000571554 DNAJC2Q99543 621 aaKnown RBP16.76■□□□□ 0.27
RAB40B-204ENST00000571554 MYH1P12882 1939 aa16.76■□□□□ 0.27
RAB40B-204ENST00000571554 FASTKD5Q7L8L6 764 aaKnown RBP16.75■□□□□ 0.27
RAB40B-204ENST00000571554 CRACR2BQ8N4Y2 399 aaPredicted RBP16.75■□□□□ 0.27
RAB40B-204ENST00000571554 EDC3Q96F86 508 aaKnown RBP16.75■□□□□ 0.27
RAB40B-204ENST00000571554 DNAJC18Q9H819 358 aa16.75■□□□□ 0.27
RAB40B-204ENST00000571554 PI4KBQ9UBF8 816 aa16.75■□□□□ 0.27
RAB40B-204ENST00000571554 GOLIM4O00461 696 aa16.74■□□□□ 0.27
RAB40B-204ENST00000571554 GDF11O95390 407 aa16.74■□□□□ 0.27
RAB40B-204ENST00000571554 CAP2P40123 477 aa16.74■□□□□ 0.27
RAB40B-204ENST00000571554 PSMC4P43686 418 aa16.74■□□□□ 0.27
RAB40B-204ENST00000571554 USP5P45974 858 aa16.74■□□□□ 0.27
RAB40B-204ENST00000571554 JAG1P78504 1218 aa16.74■□□□□ 0.27
RAB40B-204ENST00000571554 MAP3K12Q12852 859 aa16.74■□□□□ 0.27
RAB40B-204ENST00000571554 SPP2Q13103 211 aa16.74■□□□□ 0.27
RAB40B-204ENST00000571554 ARHGEF6Q15052 776 aa16.74■□□□□ 0.27
RAB40B-204ENST00000571554 SLC9C1Q4G0N8 1177 aa16.74■□□□□ 0.27
RAB40B-204ENST00000571554 TREML2Q5T2D2 321 aa16.74■□□□□ 0.27
RAB40B-204ENST00000571554 SH3TC2Q8TF17 1288 aa16.74■□□□□ 0.27
RAB40B-204ENST00000571554 TRIM47Q96LD4 638 aa16.74■□□□□ 0.27
RAB40B-204ENST00000571554 TRIM34Q9BYJ4 488 aa16.74■□□□□ 0.27
RAB40B-204ENST00000571554 DHX36Q9H2U1 1008 aaKnown RBP16.74■□□□□ 0.27
RAB40B-204ENST00000571554 HERC5Q9UII4 1024 aaKnown RBP16.74■□□□□ 0.27
RAB40B-204ENST00000571554 SMARCA5O60264 1052 aaPredicted RBP16.73■□□□□ 0.27
RAB40B-204ENST00000571554 FMNL1O95466 1100 aaPredicted RBP16.73■□□□□ 0.27
RAB40B-204ENST00000571554 PDE3AQ14432 1141 aa16.73■□□□□ 0.27
RAB40B-204ENST00000571554 ARMC5Q96C12 935 aa16.73■□□□□ 0.27
RAB40B-204ENST00000571554 CHMP4BQ9H444 224 aaKnown RBP16.73■□□□□ 0.27
RAB40B-204ENST00000571554 LOC285556D6RIA3 1793 aa16.72■□□□□ 0.27
RAB40B-204ENST00000571554 MGAMO43451 1857 aa16.72■□□□□ 0.27
RAB40B-204ENST00000571554 RAB11FIP3O75154 756 aa16.72■□□□□ 0.27
RAB40B-204ENST00000571554 HMGCS2P54868 508 aa16.72■□□□□ 0.27
RAB40B-204ENST00000571554 SLFNL1Q499Z3 407 aa16.72■□□□□ 0.27
RAB40B-204ENST00000571554 ZNF280CQ8ND82 737 aa16.72■□□□□ 0.27
RAB40B-204ENST00000571554 BOLA2Q9H3K6 86 aa16.72■□□□□ 0.27
RAB40B-204ENST00000571554 AGTPBP1Q9UPW5 1226 aa16.72■□□□□ 0.27
RAB40B-204ENST00000571554 NAV1Q8NEY1 1877 aa16.71■□□□□ 0.27
RAB40B-204ENST00000571554 USP17L5A8MUK1 530 aa16.71■□□□□ 0.27
RAB40B-204ENST00000571554 HLA-DOAP06340 250 aa16.71■□□□□ 0.27
RAB40B-204ENST00000571554 BCRP11274 1271 aa16.71■□□□□ 0.27
RAB40B-204ENST00000571554 PDE6AP16499 860 aa16.71■□□□□ 0.27
RAB40B-204ENST00000571554 OSBPP22059 807 aa16.71■□□□□ 0.27
RAB40B-204ENST00000571554 SLC9C2Q5TAH2 1124 aa16.71■□□□□ 0.27
RAB40B-204ENST00000571554 SMCR8Q8TEV9 937 aaPredicted RBP16.71■□□□□ 0.27
RAB40B-204ENST00000571554 ZNF333Q96JL9 665 aa16.71■□□□□ 0.27
RAB40B-204ENST00000571554 ZNF532Q9HCE3 1301 aa16.7■□□□□ 0.26
RAB40B-204ENST00000571554 RBBP6Q7Z6E9 1792 aaKnown RBP16.7■□□□□ 0.26
RAB40B-204ENST00000571554 MAGEB6P1A0A0J9YX57 407 aa16.7■□□□□ 0.26
RAB40B-204ENST00000571554 EN2P19622 333 aaPredicted RBP16.7■□□□□ 0.26
RAB40B-204ENST00000571554 MTMR2Q13614 643 aa16.7■□□□□ 0.26
RAB40B-204ENST00000571554 TTF1Q15361 905 aaPredicted RBP16.7■□□□□ 0.26
RAB40B-204ENST00000571554 FOXP4Q8IVH2 680 aaPredicted RBP16.7■□□□□ 0.26
RAB40B-204ENST00000571554 YTHDC1Q96MU7 727 aaKnown RBP16.7■□□□□ 0.26
RAB40B-204ENST00000571554 RIOK1Q9BRS2 568 aaKnown RBP16.7■□□□□ 0.26
RAB40B-204ENST00000571554 KIAA0100Q14667 2235 aaKnown RBP16.7■□□□□ 0.26
RAB40B-204ENST00000571554 BRCA2P51587 3418 aa16.7■□□□□ 0.26
RAB40B-204ENST00000571554 MYPNQ86TC9 1320 aa16.7■□□□□ 0.26
RAB40B-204ENST00000571554 IGSF3O75054 1194 aa16.69■□□□□ 0.26
RAB40B-204ENST00000571554 CHGBP05060 677 aa16.69■□□□□ 0.26
RAB40B-204ENST00000571554 EVX2Q03828 476 aa16.69■□□□□ 0.26
RAB40B-204ENST00000571554 METTL16Q86W50 562 aaKnown RBP16.69■□□□□ 0.26
RAB40B-204ENST00000571554 ANKRD13CQ8N6S4 541 aa16.69■□□□□ 0.26
RAB40B-204ENST00000571554 LRRCC1Q9C099 1032 aa16.69■□□□□ 0.26
RAB40B-204ENST00000571554 AS3MTQ9HBK9 375 aa16.69■□□□□ 0.26
RAB40B-204ENST00000571554 SRRDQ9UH36 339 aa16.69■□□□□ 0.26
RAB40B-204ENST00000571554 ZBTB21Q9ULJ3 1066 aa16.69■□□□□ 0.26
RAB40B-204ENST00000571554 SLC45A1Q9Y2W3 748 aa16.69■□□□□ 0.26
RAB40B-204ENST00000571554 DDX60LQ5H9U9 1706 aaKnown RBP16.69■□□□□ 0.26
RAB40B-204ENST00000571554 PDE4DIPQ5VU43 2346 aa16.69■□□□□ 0.26
RAB40B-204ENST00000571554 ASNSP08243 561 aa16.68■□□□□ 0.26
RAB40B-204ENST00000571554 FCGRTP55899 365 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms