RNA–Protein interactions for RNA: ENST00000570740.1

CDC27-211, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-211ENST00000570740 CELA3AP09093 270 aa5.43□□□□□ -1.54
CDC27-211ENST00000570740 GNA15P30679 374 aa5.43□□□□□ -1.54
CDC27-211ENST00000570740 NTF4P34130 210 aa5.43□□□□□ -1.54
CDC27-211ENST00000570740 RING1Q06587 406 aa5.43□□□□□ -1.54
CDC27-211ENST00000570740 SND1Q7KZF4 910 aaKnown RBP eCLIP5.43□□□□□ -1.54
CDC27-211ENST00000570740 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.43□□□□□ -1.54
CDC27-211ENST00000570740 SSU72Q9NP77 194 aaKnown RBP5.43□□□□□ -1.54
CDC27-211ENST00000570740 TOPBP1Q92547 1522 aa5.43□□□□□ -1.54
CDC27-211ENST00000570740 WDR97A6NE52 1622 aa5.42□□□□□ -1.54
CDC27-211ENST00000570740 PAX4O43316 350 aa5.42□□□□□ -1.54
CDC27-211ENST00000570740 LEFTY1O75610 366 aa5.42□□□□□ -1.54
CDC27-211ENST00000570740 EIF4BP23588 611 aaKnown RBP5.42□□□□□ -1.54
CDC27-211ENST00000570740 PPM1JQ5JR12 505 aa5.42□□□□□ -1.54
CDC27-211ENST00000570740 PCNX4Q63HM2 1172 aa5.42□□□□□ -1.54
CDC27-211ENST00000570740 CBLL1Q75N03 491 aa5.42□□□□□ -1.54
CDC27-211ENST00000570740 SV2BQ7L1I2 683 aa5.42□□□□□ -1.54
CDC27-211ENST00000570740 TP53INP2Q8IXH6 220 aa5.42□□□□□ -1.54
CDC27-211ENST00000570740 FLCNQ8NFG4 579 aa5.42□□□□□ -1.54
CDC27-211ENST00000570740 BCL7CQ8WUZ0 217 aaPredicted RBP5.42□□□□□ -1.54
CDC27-211ENST00000570740 DUSP23Q9BVJ7 150 aa5.42□□□□□ -1.54
CDC27-211ENST00000570740 MKNK2Q9HBH9 465 aa5.42□□□□□ -1.54
CDC27-211ENST00000570740 PAK6Q9NQU5 681 aaPredicted RBP5.42□□□□□ -1.54
CDC27-211ENST00000570740 IFT140Q96RY7 1462 aa5.42□□□□□ -1.54
CDC27-211ENST00000570740 ANKRD33BA6NCL7 494 aa5.41□□□□□ -1.54
CDC27-211ENST00000570740 DCDC2CA8MYV0 355 aa5.41□□□□□ -1.54
CDC27-211ENST00000570740 FANCGO15287 622 aa5.41□□□□□ -1.54
CDC27-211ENST00000570740 FGD1P98174 961 aa5.41□□□□□ -1.54
CDC27-211ENST00000570740 C12orf40Q86WS4 652 aa5.41□□□□□ -1.54
CDC27-211ENST00000570740 AEBP1Q8IUX7 1158 aa5.41□□□□□ -1.54
CDC27-211ENST00000570740 STK11IPQ8N1F8 1099 aa5.41□□□□□ -1.54
CDC27-211ENST00000570740 AGBL5Q8NDL9 886 aa5.41□□□□□ -1.54
CDC27-211ENST00000570740 NETO1Q8TDF5 533 aa5.41□□□□□ -1.54
CDC27-211ENST00000570740 MISP3Q96FF7 219 aa5.41□□□□□ -1.54
CDC27-211ENST00000570740 FMNL2Q96PY5 1086 aa5.41□□□□□ -1.54
CDC27-211ENST00000570740 PCDHA4Q9UN74 947 aa5.41□□□□□ -1.54
CDC27-211ENST00000570740 TTF2Q9UNY4 1162 aaKnown RBP5.41□□□□□ -1.54
CDC27-211ENST00000570740 SLC5A6Q9Y289 635 aa5.41□□□□□ -1.54
CDC27-211ENST00000570740 CSADQ9Y600 493 aa5.41□□□□□ -1.54
CDC27-211ENST00000570740 AK5Q9Y6K8 562 aa5.41□□□□□ -1.54
CDC27-211ENST00000570740 PDIA4P13667 645 aaKnown RBP5.4□□□□□ -1.54
CDC27-211ENST00000570740 OXCT1P55809 520 aa5.4□□□□□ -1.54
CDC27-211ENST00000570740 EAPPQ56P03 285 aaPredicted RBP5.4□□□□□ -1.54
CDC27-211ENST00000570740 ZBTB37Q5TC79 503 aa5.4□□□□□ -1.54
CDC27-211ENST00000570740 WFDC3Q8IUB2 231 aa5.4□□□□□ -1.54
CDC27-211ENST00000570740 PLD6Q8N2A8 252 aaKnown RBP5.4□□□□□ -1.54
CDC27-211ENST00000570740 TOP6BLQ8N6T0 577 aa5.4□□□□□ -1.54
CDC27-211ENST00000570740 FAM181AQ8N9Y4 354 aa5.4□□□□□ -1.54
CDC27-211ENST00000570740 KRTAP4-12Q9BQ66 201 aa5.4□□□□□ -1.54
CDC27-211ENST00000570740 U3KQE9 123 aa5.4□□□□□ -1.54
CDC27-211ENST00000570740 PTPN11Q06124 597 aaPredicted RBP5.39□□□□□ -1.55
CDC27-211ENST00000570740 INPP5AQ14642 412 aa5.39□□□□□ -1.55
CDC27-211ENST00000570740 TTBK2Q6IQ55 1244 aa5.39□□□□□ -1.55
CDC27-211ENST00000570740 LRFN4Q6PJG9 635 aa5.39□□□□□ -1.55
CDC27-211ENST00000570740 ZNF574Q6ZN55 896 aaPredicted RBP5.39□□□□□ -1.55
CDC27-211ENST00000570740 FAM214BQ7L5A3 538 aa5.39□□□□□ -1.55
CDC27-211ENST00000570740 UBE3DQ7Z6J8 389 aa5.39□□□□□ -1.55
CDC27-211ENST00000570740 GAL3ST3Q96A11 431 aa5.39□□□□□ -1.55
CDC27-211ENST00000570740 ELMO3Q96BJ8 720 aa5.39□□□□□ -1.55
CDC27-211ENST00000570740 DUSP9Q99956 384 aaKnown RBP5.39□□□□□ -1.55
CDC27-211ENST00000570740 PICK1Q9NRD5 415 aa5.39□□□□□ -1.55
CDC27-211ENST00000570740 RNF19AQ9NV58 838 aa5.39□□□□□ -1.55
CDC27-211ENST00000570740 CEACAM5P06731 702 aa5.38□□□□□ -1.55
CDC27-211ENST00000570740 RPS26P62854 115 aaKnown RBP5.38□□□□□ -1.55
CDC27-211ENST00000570740 PRKCQQ04759 706 aa5.38□□□□□ -1.55
CDC27-211ENST00000570740 BNIP3Q12983 259 aa5.38□□□□□ -1.55
CDC27-211ENST00000570740 IFI16Q16666 785 aaKnown RBP5.38□□□□□ -1.55
CDC27-211ENST00000570740 DNAJC14Q6Y2X3 702 aaPredicted RBP5.38□□□□□ -1.55
CDC27-211ENST00000570740 CYFIP1Q7L576 1253 aa5.38□□□□□ -1.55
CDC27-211ENST00000570740 SPRED2Q7Z698 418 aa5.38□□□□□ -1.55
CDC27-211ENST00000570740 KCT2Q8NC54 265 aa5.38□□□□□ -1.55
CDC27-211ENST00000570740 ZNF507Q8TCN5 953 aa5.38□□□□□ -1.55
CDC27-211ENST00000570740 HEXIM2Q96MH2 286 aaKnown RBP5.38□□□□□ -1.55
CDC27-211ENST00000570740 PRDM10Q9NQV6 1147 aa5.38□□□□□ -1.55
CDC27-211ENST00000570740 VAV3Q9UKW4 847 aa5.38□□□□□ -1.55
CDC27-211ENST00000570740 PLAGL2Q9UPG8 496 aa5.38□□□□□ -1.55
CDC27-211ENST00000570740 TARBP1Q13395 1621 aaKnown RBP5.37□□□□□ -1.55
CDC27-211ENST00000570740 TXKP42681 527 aa5.37□□□□□ -1.55
CDC27-211ENST00000570740 CCDC85BQ15834 202 aaPredicted RBP5.37□□□□□ -1.55
CDC27-211ENST00000570740 ZNF326Q5BKZ1 582 aaKnown RBP5.37□□□□□ -1.55
CDC27-211ENST00000570740 ARHGAP27Q6ZUM4 889 aa5.37□□□□□ -1.55
CDC27-211ENST00000570740 CDC37L1Q7L3B6 337 aa5.37□□□□□ -1.55
CDC27-211ENST00000570740 HDXQ7Z353 690 aa5.37□□□□□ -1.55
CDC27-211ENST00000570740 NPAS4Q8IUM7 802 aa5.37□□□□□ -1.55
CDC27-211ENST00000570740 PLPPR2Q96GM1 343 aa5.37□□□□□ -1.55
CDC27-211ENST00000570740 GTF2IRD1Q9UHL9 959 aa5.37□□□□□ -1.55
CDC27-211ENST00000570740 RNF114Q9Y508 228 aa5.37□□□□□ -1.55
CDC27-211ENST00000570740 SNCAIPQ9Y6H5 919 aa5.37□□□□□ -1.55
CDC27-211ENST00000570740 SOGA1O94964 1423 aa5.37□□□□□ -1.55
CDC27-211ENST00000570740 POLA1P09884 1462 aaPredicted RBP5.37□□□□□ -1.55
CDC27-211ENST00000570740 CUX1P39880 1505 aa5.37□□□□□ -1.55
CDC27-211ENST00000570740 TMEM265A0A087WTH1 108 aa5.36□□□□□ -1.55
CDC27-211ENST00000570740 PRAMEF27A3QJZ7 478 aa5.36□□□□□ -1.55
CDC27-211ENST00000570740 IGF2BP3O00425 579 aaKnown RBP eCLIP5.36□□□□□ -1.55
CDC27-211ENST00000570740 LRIG2O94898 1065 aa5.36□□□□□ -1.55
CDC27-211ENST00000570740 CD8BP10966 210 aa5.36□□□□□ -1.55
CDC27-211ENST00000570740 ITGB5P18084 799 aa5.36□□□□□ -1.55
CDC27-211ENST00000570740 DEKP35659 375 aaKnown RBP5.36□□□□□ -1.55
CDC27-211ENST00000570740 DAB2P98082 770 aa5.36□□□□□ -1.55
CDC27-211ENST00000570740 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.36□□□□□ -1.55
CDC27-211ENST00000570740 HRASLS5Q96KN8 279 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms