RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 ZNF697Q5TEC3 545 aa9.13□□□□□ -0.95
SMG6-205ENST00000570659 FASTKD5Q7L8L6 764 aaKnown RBP9.13□□□□□ -0.95
SMG6-205ENST00000570659 COA7Q96BR5 231 aa9.13□□□□□ -0.95
SMG6-205ENST00000570659 NECAB3Q96P71 396 aaPredicted RBP9.13□□□□□ -0.95
SMG6-205ENST00000570659 NDUFB9Q9Y6M9 179 aa9.13□□□□□ -0.95
SMG6-205ENST00000570659 ADORA1P30542 326 aa9.12□□□□□ -0.95
SMG6-205ENST00000570659 PLA2G5P39877 138 aa9.12□□□□□ -0.95
SMG6-205ENST00000570659 EXOSC9Q06265 439 aaKnown RBP9.12□□□□□ -0.95
SMG6-205ENST00000570659 SPP2Q13103 211 aa9.12□□□□□ -0.95
SMG6-205ENST00000570659 DDX10Q13206 875 aaKnown RBP9.12□□□□□ -0.95
SMG6-205ENST00000570659 RABL6Q3YEC7 729 aaPredicted RBP9.12□□□□□ -0.95
SMG6-205ENST00000570659 METTL24Q5JXM2 366 aa9.12□□□□□ -0.95
SMG6-205ENST00000570659 ATG9AQ7Z3C6 839 aa9.12□□□□□ -0.95
SMG6-205ENST00000570659 WWC1Q8IX03 1113 aa9.12□□□□□ -0.95
SMG6-205ENST00000570659 TBC1D22AQ8WUA7 517 aa9.12□□□□□ -0.95
SMG6-205ENST00000570659 P2RX7Q99572 595 aaKnown RBP9.12□□□□□ -0.95
SMG6-205ENST00000570659 BDP1A6H8Y1 2624 aa9.12□□□□□ -0.95
SMG6-205ENST00000570659 CACNA1FO60840 1977 aa9.12□□□□□ -0.95
SMG6-205ENST00000570659 MROH5Q6ZUA9 1318 aa9.11□□□□□ -0.95
SMG6-205ENST00000570659 CHD7Q9P2D1 2997 aa9.11□□□□□ -0.95
SMG6-205ENST00000570659 TRIM43BA6NCK2 446 aa9.11□□□□□ -0.95
SMG6-205ENST00000570659 FRAT2O75474 233 aaPredicted RBP9.11□□□□□ -0.95
SMG6-205ENST00000570659 CNMDO75829 334 aa9.11□□□□□ -0.95
SMG6-205ENST00000570659 PHKA1P46020 1223 aa9.11□□□□□ -0.95
SMG6-205ENST00000570659 RHBDL3P58872 404 aa9.11□□□□□ -0.95
SMG6-205ENST00000570659 RTP1P59025 263 aa9.11□□□□□ -0.95
SMG6-205ENST00000570659 PICALMQ13492 652 aa9.11□□□□□ -0.95
SMG6-205ENST00000570659 MORN1Q5T089 497 aa9.11□□□□□ -0.95
SMG6-205ENST00000570659 ANO1Q5XXA6 986 aa9.11□□□□□ -0.95
SMG6-205ENST00000570659 VPS37DQ86XT2 251 aa9.11□□□□□ -0.95
SMG6-205ENST00000570659 BADQ92934 168 aa9.11□□□□□ -0.95
SMG6-205ENST00000570659 TRIM43Q96BQ3 446 aaPredicted RBP9.11□□□□□ -0.95
SMG6-205ENST00000570659 SENP6Q9GZR1 1112 aaPredicted RBP9.11□□□□□ -0.95
SMG6-205ENST00000570659 PICK1Q9NRD5 415 aa9.11□□□□□ -0.95
SMG6-205ENST00000570659 RBPJLQ9UBG7 517 aa9.11□□□□□ -0.95
SMG6-205ENST00000570659 MORF4L1Q9UBU8 362 aa9.11□□□□□ -0.95
SMG6-205ENST00000570659 UTYO14607 1347 aa9.1□□□□□ -0.95
SMG6-205ENST00000570659 GAKO14976 1311 aa9.1□□□□□ -0.95
SMG6-205ENST00000570659 TCF20Q9UGU0 1960 aaKnown RBP9.1□□□□□ -0.95
SMG6-205ENST00000570659 TNFRSF10AO00220 468 aa9.1□□□□□ -0.95
SMG6-205ENST00000570659 IGHA2P01877 340 aa9.1□□□□□ -0.95
SMG6-205ENST00000570659 FOSL2P15408 326 aa9.1□□□□□ -0.95
SMG6-205ENST00000570659 HOXD11P31277 338 aaPredicted RBP9.1□□□□□ -0.95
SMG6-205ENST00000570659 HOOK2Q96ED9 719 aa9.1□□□□□ -0.95
SMG6-205ENST00000570659 IDI2Q9BXS1 227 aa9.1□□□□□ -0.95
SMG6-205ENST00000570659 DNAJC18Q9H819 358 aa9.1□□□□□ -0.95
SMG6-205ENST00000570659 CDK5RAP2Q96SN8 1893 aa9.09□□□□□ -0.95
SMG6-205ENST00000570659 TMEM265A0A087WTH1 108 aa9.09□□□□□ -0.95
SMG6-205ENST00000570659 CTNND1O60716 968 aaKnown RBP9.09□□□□□ -0.95
SMG6-205ENST00000570659 SLC4A10Q6U841 1118 aa9.09□□□□□ -0.95
SMG6-205ENST00000570659 PI16Q6UXB8 463 aa9.09□□□□□ -0.95
SMG6-205ENST00000570659 NPLOC4Q8TAT6 608 aa9.09□□□□□ -0.95
SMG6-205ENST00000570659 PDLIM7Q9NR12 457 aa9.09□□□□□ -0.95
SMG6-205ENST00000570659 SUGT1Q9Y2Z0 365 aa9.09□□□□□ -0.95
SMG6-205ENST00000570659 XIRP2A4UGR9 3374 aa9.09□□□□□ -0.95
SMG6-205ENST00000570659 ENTPD3O75355 529 aa9.08□□□□□ -0.96
SMG6-205ENST00000570659 PBX2P40425 430 aa9.08□□□□□ -0.96
SMG6-205ENST00000570659 MTMR2Q13614 643 aa9.08□□□□□ -0.96
SMG6-205ENST00000570659 ADGRE1Q14246 886 aa9.08□□□□□ -0.96
SMG6-205ENST00000570659 TRIM60Q495X7 471 aa9.08□□□□□ -0.96
SMG6-205ENST00000570659 CAVIN4Q5BKX8 364 aa9.08□□□□□ -0.96
SMG6-205ENST00000570659 TJAP1Q5JTD0 557 aa9.08□□□□□ -0.96
SMG6-205ENST00000570659 GJC2Q5T442 439 aaPredicted RBP9.08□□□□□ -0.96
SMG6-205ENST00000570659 GPR142Q7Z601 462 aa9.08□□□□□ -0.96
SMG6-205ENST00000570659 PROCA1Q8NCQ7 364 aaPredicted RBP9.08□□□□□ -0.96
SMG6-205ENST00000570659 C9orf78Q9NZ63 289 aaPredicted RBP9.08□□□□□ -0.96
SMG6-205ENST00000570659 ATP11BQ9Y2G3 1177 aa9.08□□□□□ -0.96
SMG6-205ENST00000570659 LRRFIP2Q9Y608 721 aaKnown RBP9.08□□□□□ -0.96
SMG6-205ENST00000570659 MAST3O60307 1309 aa9.07□□□□□ -0.96
SMG6-205ENST00000570659 PLXNA1Q9UIW2 1896 aa9.07□□□□□ -0.96
SMG6-205ENST00000570659 GRXCR1A8MXD5 290 aa9.07□□□□□ -0.96
SMG6-205ENST00000570659 LDHBP07195 334 aaKnown RBP9.07□□□□□ -0.96
SMG6-205ENST00000570659 ZKSCAN1P17029 563 aaPredicted RBP9.07□□□□□ -0.96
SMG6-205ENST00000570659 CYP2C19P33261 490 aa9.07□□□□□ -0.96
SMG6-205ENST00000570659 BTDP43251 543 aa9.07□□□□□ -0.96
SMG6-205ENST00000570659 GCLCP48506 637 aaPredicted RBP9.07□□□□□ -0.96
SMG6-205ENST00000570659 HERVK_113P62684 666 aa9.07□□□□□ -0.96
SMG6-205ENST00000570659 CALD1Q05682 793 aaKnown RBP9.07□□□□□ -0.96
SMG6-205ENST00000570659 MAP3K12Q12852 859 aa9.07□□□□□ -0.96
SMG6-205ENST00000570659 RASGRF1Q13972 1273 aa9.07□□□□□ -0.96
SMG6-205ENST00000570659 PUM3Q15397 648 aaKnown RBP9.07□□□□□ -0.96
SMG6-205ENST00000570659 SH3D19Q5HYK7 790 aa9.07□□□□□ -0.96
SMG6-205ENST00000570659 ZSCAN29Q8IWY8 852 aaPredicted RBP9.07□□□□□ -0.96
SMG6-205ENST00000570659 ZNF280CQ8ND82 737 aa9.07□□□□□ -0.96
SMG6-205ENST00000570659 WDR66Q8TBY9 1149 aa9.07□□□□□ -0.96
SMG6-205ENST00000570659 PPM1EQ8WY54 764 aa9.07□□□□□ -0.96
SMG6-205ENST00000570659 KHSRPQ92945 711 aaKnown RBP eCLIP9.07□□□□□ -0.96
SMG6-205ENST00000570659 PRKRIP1Q9H875 184 aaPredicted RBP9.07□□□□□ -0.96
SMG6-205ENST00000570659 SALL2Q9Y467 1007 aaPredicted RBP9.07□□□□□ -0.96
SMG6-205ENST00000570659 KIF16BQ96L93 1317 aa9.06□□□□□ -0.96
SMG6-205ENST00000570659 NCOR1O75376 2440 aa9.06□□□□□ -0.96
SMG6-205ENST00000570659 ALDH1L1O75891 902 aa9.06□□□□□ -0.96
SMG6-205ENST00000570659 XRCC5P13010 732 aaKnown RBP9.06□□□□□ -0.96
SMG6-205ENST00000570659 CAP2P40123 477 aa9.06□□□□□ -0.96
SMG6-205ENST00000570659 SMAD3P84022 425 aaKnown RBP9.06□□□□□ -0.96
SMG6-205ENST00000570659 ADAMTS19Q8TE59 1207 aa9.06□□□□□ -0.96
SMG6-205ENST00000570659 FERMT2Q96AC1 680 aa9.06□□□□□ -0.96
SMG6-205ENST00000570659 LBHD1Q9BQE6 289 aaPredicted RBP9.06□□□□□ -0.96
SMG6-205ENST00000570659 NUDT12Q9BQG2 462 aa9.06□□□□□ -0.96
SMG6-205ENST00000570659 PAGR1Q9BTK6 254 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms