RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 TDRD7Q8NHU6 1098 aaKnown RBP8.15□□□□□ -1.1
SMG6-204ENST00000570606 HLA-CQ95604 372 aa8.15□□□□□ -1.1
SMG6-204ENST00000570606 ERO1AQ96HE7 468 aa8.15□□□□□ -1.1
SMG6-204ENST00000570606 BICC1Q9H694 974 aaKnown RBP8.15□□□□□ -1.1
SMG6-204ENST00000570606 TDRD3Q9H7E2 651 aaKnown RBP8.15□□□□□ -1.1
SMG6-204ENST00000570606 ELP3Q9H9T3 547 aa8.15□□□□□ -1.1
SMG6-204ENST00000570606 ZNF70Q9UC06 446 aaPredicted RBP8.15□□□□□ -1.1
SMG6-204ENST00000570606 PCDHGC3Q9UN70 934 aa8.15□□□□□ -1.1
SMG6-204ENST00000570606 IQSEC3Q9UPP2 1182 aaPredicted RBP8.15□□□□□ -1.1
SMG6-204ENST00000570606 COG6Q9Y2V7 657 aa8.15□□□□□ -1.1
SMG6-204ENST00000570606 CEP290O15078 2479 aa8.14□□□□□ -1.11
SMG6-204ENST00000570606 CENPFP49454 3210 aa8.14□□□□□ -1.11
SMG6-204ENST00000570606 APBB1O00213 710 aa8.14□□□□□ -1.11
SMG6-204ENST00000570606 NBPF7P0C2Y1 421 aaPredicted RBP8.14□□□□□ -1.11
SMG6-204ENST00000570606 FDX1P10109 184 aa8.14□□□□□ -1.11
SMG6-204ENST00000570606 CRHR2Q13324 411 aa8.14□□□□□ -1.11
SMG6-204ENST00000570606 CAVIN4Q5BKX8 364 aa8.14□□□□□ -1.11
SMG6-204ENST00000570606 OTOP1Q7RTM1 612 aa8.14□□□□□ -1.11
SMG6-204ENST00000570606 DZIP1LQ8IYY4 767 aaKnown RBP8.14□□□□□ -1.11
SMG6-204ENST00000570606 CD99L2Q8TCZ2 262 aa8.14□□□□□ -1.11
SMG6-204ENST00000570606 TBC1D22AQ8WUA7 517 aa8.14□□□□□ -1.11
SMG6-204ENST00000570606 OPTNQ96CV9 577 aa8.14□□□□□ -1.11
SMG6-204ENST00000570606 FAM84BQ96KN1 310 aaPredicted RBP8.14□□□□□ -1.11
SMG6-204ENST00000570606 TMEM39BQ9GZU3 492 aa8.14□□□□□ -1.11
SMG6-204ENST00000570606 TMOD2Q9NZR1 351 aa8.14□□□□□ -1.11
SMG6-204ENST00000570606 CSADQ9Y600 493 aa8.14□□□□□ -1.11
SMG6-204ENST00000570606 UTYO14607 1347 aa8.13□□□□□ -1.11
SMG6-204ENST00000570606 MAST3O60307 1309 aa8.13□□□□□ -1.11
SMG6-204ENST00000570606 PTPRCP08575 1304 aa8.13□□□□□ -1.11
SMG6-204ENST00000570606 USP2O75604 605 aaPredicted RBP8.13□□□□□ -1.11
SMG6-204ENST00000570606 GUCA2AQ02747 115 aa8.13□□□□□ -1.11
SMG6-204ENST00000570606 VGLL4Q14135 290 aa8.13□□□□□ -1.11
SMG6-204ENST00000570606 RABL6Q3YEC7 729 aaPredicted RBP8.13□□□□□ -1.11
SMG6-204ENST00000570606 LRRC24Q50LG9 513 aa8.13□□□□□ -1.11
SMG6-204ENST00000570606 CDAN1Q8IWY9 1227 aa8.13□□□□□ -1.11
SMG6-204ENST00000570606 ANKRD44Q8N8A2 993 aa8.13□□□□□ -1.11
SMG6-204ENST00000570606 TEKT1Q969V4 418 aa8.13□□□□□ -1.11
SMG6-204ENST00000570606 FAM163AQ96GL9 167 aaPredicted RBP8.13□□□□□ -1.11
SMG6-204ENST00000570606 KAZALD1Q96I82 304 aa8.13□□□□□ -1.11
SMG6-204ENST00000570606 ZFRQ96KR1 1074 aaKnown RBP8.13□□□□□ -1.11
SMG6-204ENST00000570606 EFCC1Q9HA90 598 aa8.13□□□□□ -1.11
SMG6-204ENST00000570606 RIPOR2Q9Y4F9 1068 aa8.13□□□□□ -1.11
SMG6-204ENST00000570606 ZSWIM8A7E2V4 1837 aa8.13□□□□□ -1.11
SMG6-204ENST00000570606 DOCK2Q92608 1830 aa8.13□□□□□ -1.11
SMG6-204ENST00000570606 ZNF521Q96K83 1311 aa8.12□□□□□ -1.11
SMG6-204ENST00000570606 CCL15-CCL14A0A0B4J2E2 113 aa8.12□□□□□ -1.11
SMG6-204ENST00000570606 E9PSI1 815 aa8.12□□□□□ -1.11
SMG6-204ENST00000570606 RAD21O60216 631 aa8.12□□□□□ -1.11
SMG6-204ENST00000570606 WDHD1O75717 1129 aaPredicted RBP8.12□□□□□ -1.11
SMG6-204ENST00000570606 PDE8BO95263 885 aa8.12□□□□□ -1.11
SMG6-204ENST00000570606 CFHP08603 1231 aa8.12□□□□□ -1.11
SMG6-204ENST00000570606 IFIT1P09914 478 aaKnown RBP8.12□□□□□ -1.11
SMG6-204ENST00000570606 SLC4A3P48751 1232 aa8.12□□□□□ -1.11
SMG6-204ENST00000570606 CACNB3P54284 484 aa8.12□□□□□ -1.11
SMG6-204ENST00000570606 SP3Q02447 781 aa8.12□□□□□ -1.11
SMG6-204ENST00000570606 FUT2Q10981 343 aa8.12□□□□□ -1.11
SMG6-204ENST00000570606 PUM3Q15397 648 aaKnown RBP8.12□□□□□ -1.11
SMG6-204ENST00000570606 TAF1CQ15572 869 aaPredicted RBP8.12□□□□□ -1.11
SMG6-204ENST00000570606 GRIK5Q16478 980 aa8.12□□□□□ -1.11
SMG6-204ENST00000570606 CCL15Q16663 113 aa8.12□□□□□ -1.11
SMG6-204ENST00000570606 FBXO33Q7Z6M2 555 aa8.12□□□□□ -1.11
SMG6-204ENST00000570606 MRPL50Q8N5N7 158 aaKnown RBP8.12□□□□□ -1.11
SMG6-204ENST00000570606 KLHDC4Q8TBB5 520 aa8.12□□□□□ -1.11
SMG6-204ENST00000570606 TEPSINQ96N21 525 aa8.12□□□□□ -1.11
SMG6-204ENST00000570606 RPAP1Q9BWH6 1393 aaPredicted RBP8.11□□□□□ -1.11
SMG6-204ENST00000570606 MYH2Q9UKX2 1941 aa8.11□□□□□ -1.11
SMG6-204ENST00000570606 KIF16BQ96L93 1317 aa8.11□□□□□ -1.11
SMG6-204ENST00000570606 HRO43593 1189 aa8.11□□□□□ -1.11
SMG6-204ENST00000570606 SLC5A1P13866 664 aa8.11□□□□□ -1.11
SMG6-204ENST00000570606 BCAMP50895 628 aa8.11□□□□□ -1.11
SMG6-204ENST00000570606 GTF2A2P52657 109 aa8.11□□□□□ -1.11
SMG6-204ENST00000570606 LSM11P83369 360 aaKnown RBP eCLIP8.11□□□□□ -1.11
SMG6-204ENST00000570606 HDLBPQ00341 1268 aaKnown RBP8.11□□□□□ -1.11
SMG6-204ENST00000570606 INTS3Q68E01 1043 aaKnown RBP8.11□□□□□ -1.11
SMG6-204ENST00000570606 ADGRD1Q6QNK2 874 aa8.11□□□□□ -1.11
SMG6-204ENST00000570606 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.11□□□□□ -1.11
SMG6-204ENST00000570606 VGLL2Q8N8G2 317 aa8.11□□□□□ -1.11
SMG6-204ENST00000570606 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.11□□□□□ -1.11
SMG6-204ENST00000570606 BRI3BPQ8WY22 251 aa8.11□□□□□ -1.11
SMG6-204ENST00000570606 SSH1Q8WYL5 1049 aa8.11□□□□□ -1.11
SMG6-204ENST00000570606 HOOK2Q96ED9 719 aa8.11□□□□□ -1.11
SMG6-204ENST00000570606 WRNIP1Q96S55 665 aa8.11□□□□□ -1.11
SMG6-204ENST00000570606 PTPN18Q99952 460 aa8.11□□□□□ -1.11
SMG6-204ENST00000570606 ZFYVE28Q9HCC9 887 aa8.11□□□□□ -1.11
SMG6-204ENST00000570606 BRCA2P51587 3418 aa8.11□□□□□ -1.11
SMG6-204ENST00000570606 MKI67P46013 3256 aaKnown RBP8.11□□□□□ -1.11
SMG6-204ENST00000570606 AP1G2O75843 785 aa8.1□□□□□ -1.11
SMG6-204ENST00000570606 ARHGEF6Q15052 776 aa8.1□□□□□ -1.11
SMG6-204ENST00000570606 DCAF15Q66K64 600 aa8.1□□□□□ -1.11
SMG6-204ENST00000570606 ZDHHC15Q96MV8 337 aa8.1□□□□□ -1.11
SMG6-204ENST00000570606 SMC4Q9NTJ3 1288 aa8.1□□□□□ -1.11
SMG6-204ENST00000570606 PTPN22Q9Y2R2 807 aa8.1□□□□□ -1.11
SMG6-204ENST00000570606 EYA2O00167 538 aa8.09□□□□□ -1.11
SMG6-204ENST00000570606 UBTFL1P0CB47 393 aaPredicted RBP8.09□□□□□ -1.11
SMG6-204ENST00000570606 CETPP11597 493 aa8.09□□□□□ -1.11
SMG6-204ENST00000570606 SNAPC2Q13487 334 aa8.09□□□□□ -1.11
SMG6-204ENST00000570606 MTMR2Q13614 643 aa8.09□□□□□ -1.11
SMG6-204ENST00000570606 KIF22Q14807 665 aa8.09□□□□□ -1.11
SMG6-204ENST00000570606 SLC9C1Q4G0N8 1177 aa8.09□□□□□ -1.11
SMG6-204ENST00000570606 FAM83AQ86UY5 434 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms