RNA–Protein interactions for RNA: ENST00000569895.3

RBFOX1-219, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 3

Gene RBFOX1, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-219ENST00000569895 ZNF333Q96JL9 665 aa27.5■■□□□ 1.99
RBFOX1-219ENST00000569895 ADGRA2Q96PE1 1338 aa27.49■■□□□ 1.99
RBFOX1-219ENST00000569895 POTEFA5A3E0 1075 aa27.49■■□□□ 1.99
RBFOX1-219ENST00000569895 FAM196BA6NMK8 535 aa27.49■■□□□ 1.99
RBFOX1-219ENST00000569895 IDH1O75874 414 aaKnown RBP27.49■■□□□ 1.99
RBFOX1-219ENST00000569895 CYP2C8P10632 490 aa27.49■■□□□ 1.99
RBFOX1-219ENST00000569895 CYP7A1P22680 504 aa27.49■■□□□ 1.99
RBFOX1-219ENST00000569895 CAP2P40123 477 aa27.49■■□□□ 1.99
RBFOX1-219ENST00000569895 FOXP4Q8IVH2 680 aaPredicted RBP27.49■■□□□ 1.99
RBFOX1-219ENST00000569895 TRIM34Q9BYJ4 488 aa27.49■■□□□ 1.99
RBFOX1-219ENST00000569895 RCAN3Q9UKA8 241 aa27.49■■□□□ 1.99
RBFOX1-219ENST00000569895 RHPN1Q8TCX5 695 aa27.48■■□□□ 1.99
RBFOX1-219ENST00000569895 COG6Q9Y2V7 657 aa27.48■■□□□ 1.99
RBFOX1-219ENST00000569895 MAP3K12Q12852 859 aa27.47■■□□□ 1.99
RBFOX1-219ENST00000569895 SLC4A8Q2Y0W8 1093 aa27.47■■□□□ 1.99
RBFOX1-219ENST00000569895 ADGRA1Q86SQ6 560 aa27.47■■□□□ 1.99
RBFOX1-219ENST00000569895 MAPKAPK5Q8IW41 473 aa27.47■■□□□ 1.99
RBFOX1-219ENST00000569895 CLASRPQ8N2M8 674 aaKnown RBP27.47■■□□□ 1.99
RBFOX1-219ENST00000569895 ZNF280CQ8ND82 737 aa27.47■■□□□ 1.99
RBFOX1-219ENST00000569895 SMCR8Q8TEV9 937 aaPredicted RBP27.47■■□□□ 1.99
RBFOX1-219ENST00000569895 AS3MTQ9HBK9 375 aa27.47■■□□□ 1.99
RBFOX1-219ENST00000569895 SRRDQ9UH36 339 aa27.47■■□□□ 1.99
RBFOX1-219ENST00000569895 AGTPBP1Q9UPW5 1226 aa27.47■■□□□ 1.99
RBFOX1-219ENST00000569895 USP17L5A8MUK1 530 aa27.46■■□□□ 1.99
RBFOX1-219ENST00000569895 ECM2O94769 699 aaPredicted RBP27.46■■□□□ 1.99
RBFOX1-219ENST00000569895 BCRP11274 1271 aa27.46■■□□□ 1.99
RBFOX1-219ENST00000569895 FCGRTP55899 365 aa27.46■■□□□ 1.99
RBFOX1-219ENST00000569895 SPP2Q13103 211 aa27.46■■□□□ 1.99
RBFOX1-219ENST00000569895 CRACR2BQ8N4Y2 399 aaPredicted RBP27.46■■□□□ 1.99
RBFOX1-219ENST00000569895 PROCA1Q8NCQ7 364 aaPredicted RBP27.46■■□□□ 1.99
RBFOX1-219ENST00000569895 KIF1BPQ96EK5 621 aa27.46■■□□□ 1.99
RBFOX1-219ENST00000569895 TRIM47Q96LD4 638 aa27.46■■□□□ 1.99
RBFOX1-219ENST00000569895 ZBTB40Q9NUA8 1239 aa27.46■■□□□ 1.99
RBFOX1-219ENST00000569895 PNMA3Q9UL41 463 aa27.46■■□□□ 1.99
RBFOX1-219ENST00000569895 FLT1P17948 1338 aa27.45■■□□□ 1.99
RBFOX1-219ENST00000569895 HLA-DOAP06340 250 aa27.45■■□□□ 1.98
RBFOX1-219ENST00000569895 PRPF38BQ5VTL8 546 aaKnown RBP27.45■■□□□ 1.98
RBFOX1-219ENST00000569895 RAET1EQ8TD07 263 aa27.45■■□□□ 1.98
RBFOX1-219ENST00000569895 IL1RAPL2Q9NP60 686 aa27.45■■□□□ 1.98
RBFOX1-219ENST00000569895 OSBPP22059 807 aa27.44■■□□□ 1.98
RBFOX1-219ENST00000569895 PABPC4Q13310 644 aaKnown RBP eCLIP27.44■■□□□ 1.98
RBFOX1-219ENST00000569895 TTF1Q15361 905 aaPredicted RBP27.44■■□□□ 1.98
RBFOX1-219ENST00000569895 CCDC84Q86UT8 332 aaPredicted RBP27.44■■□□□ 1.98
RBFOX1-219ENST00000569895 MAGEB6Q8N7X4 407 aa27.44■■□□□ 1.98
RBFOX1-219ENST00000569895 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.44■■□□□ 1.98
RBFOX1-219ENST00000569895 RAB11FIP3O75154 756 aa27.43■■□□□ 1.98
RBFOX1-219ENST00000569895 ASNSP08243 561 aa27.43■■□□□ 1.98
RBFOX1-219ENST00000569895 IFIT2P09913 472 aaKnown RBP27.43■■□□□ 1.98
RBFOX1-219ENST00000569895 SH3TC2Q8TF17 1288 aa27.43■■□□□ 1.98
RBFOX1-219ENST00000569895 GINM1Q9NU53 330 aa27.43■■□□□ 1.98
RBFOX1-219ENST00000569895 PALD1Q9ULE6 856 aa27.43■■□□□ 1.98
RBFOX1-219ENST00000569895 DOCK1Q14185 1865 aa27.42■■□□□ 1.98
RBFOX1-219ENST00000569895 TNRC18O15417 2968 aaPredicted RBP27.42■■□□□ 1.98
RBFOX1-219ENST00000569895 EN2P19622 333 aaPredicted RBP27.42■■□□□ 1.98
RBFOX1-219ENST00000569895 CTGFP29279 349 aa27.42■■□□□ 1.98
RBFOX1-219ENST00000569895 USP5P45974 858 aa27.42■■□□□ 1.98
RBFOX1-219ENST00000569895 DYNLL1P63167 89 aaKnown RBP27.42■■□□□ 1.98
RBFOX1-219ENST00000569895 METTL16Q86W50 562 aaKnown RBP27.42■■□□□ 1.98
RBFOX1-219ENST00000569895 MYPNQ86TC9 1320 aa27.41■■□□□ 1.98
RBFOX1-219ENST00000569895 MAST2Q6P0Q8 1798 aa27.41■■□□□ 1.98
RBFOX1-219ENST00000569895 APBB1O00213 710 aa27.41■■□□□ 1.98
RBFOX1-219ENST00000569895 MIGA1Q8NAN2 632 aa27.41■■□□□ 1.98
RBFOX1-219ENST00000569895 ANTXR1Q9H6X2 564 aa27.41■■□□□ 1.98
RBFOX1-219ENST00000569895 NDUFB9Q9Y6M9 179 aa27.41■■□□□ 1.98
RBFOX1-219ENST00000569895 HTTP42858 3142 aa27.4■■□□□ 1.98
RBFOX1-219ENST00000569895 RRP1BQ14684 758 aaKnown RBP27.4■■□□□ 1.98
RBFOX1-219ENST00000569895 WDR18Q9BV38 432 aa27.4■■□□□ 1.98
RBFOX1-219ENST00000569895 SAP30BPQ9UHR5 308 aaKnown RBP27.4■■□□□ 1.98
RBFOX1-219ENST00000569895 MYCP01106 439 aaPredicted RBP27.39■■□□□ 1.98
RBFOX1-219ENST00000569895 GRK4P32298 578 aa27.39■■□□□ 1.98
RBFOX1-219ENST00000569895 HMGCS2P54868 508 aa27.39■■□□□ 1.98
RBFOX1-219ENST00000569895 PDE3AQ14432 1141 aa27.39■■□□□ 1.98
RBFOX1-219ENST00000569895 SH3D19Q5HYK7 790 aa27.39■■□□□ 1.98
RBFOX1-219ENST00000569895 TREML2Q5T2D2 321 aa27.39■■□□□ 1.98
RBFOX1-219ENST00000569895 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.39■■□□□ 1.98
RBFOX1-219ENST00000569895 SIRT2Q8IXJ6 389 aa27.38■■□□□ 1.97
RBFOX1-219ENST00000569895 C19orf81C9J6K1 198 aa27.37■■□□□ 1.97
RBFOX1-219ENST00000569895 GCLCP48506 637 aaPredicted RBP27.37■■□□□ 1.97
RBFOX1-219ENST00000569895 TTC6Q86TZ1 520 aa27.37■■□□□ 1.97
RBFOX1-219ENST00000569895 TMOD4Q9NZQ9 345 aa27.37■■□□□ 1.97
RBFOX1-219ENST00000569895 BIN2Q9UBW5 565 aaPredicted RBP27.37■■□□□ 1.97
RBFOX1-219ENST00000569895 BACE1P56817 501 aa27.36■■□□□ 1.97
RBFOX1-219ENST00000569895 UBXN2AP68543 259 aa27.36■■□□□ 1.97
RBFOX1-219ENST00000569895 PRKCZQ05513 592 aa27.36■■□□□ 1.97
RBFOX1-219ENST00000569895 ANKRD13CQ8N6S4 541 aa27.36■■□□□ 1.97
RBFOX1-219ENST00000569895 TNPO2O14787 897 aaKnown RBP27.35■■□□□ 1.97
RBFOX1-219ENST00000569895 FAM110CQ1W6H9 321 aa27.35■■□□□ 1.97
RBFOX1-219ENST00000569895 SLC9C2Q5TAH2 1124 aa27.35■■□□□ 1.97
RBFOX1-219ENST00000569895 SLAIN1Q8ND83 568 aa27.35■■□□□ 1.97
RBFOX1-219ENST00000569895 COA7Q96BR5 231 aa27.35■■□□□ 1.97
RBFOX1-219ENST00000569895 BCL11AQ9H165 835 aa27.35■■□□□ 1.97
RBFOX1-219ENST00000569895 DNAJC18Q9H819 358 aa27.35■■□□□ 1.97
RBFOX1-219ENST00000569895 MAGEB6P1A0A0J9YX57 407 aa27.34■■□□□ 1.97
RBFOX1-219ENST00000569895 USP17L10C9JJH3 530 aa27.34■■□□□ 1.97
RBFOX1-219ENST00000569895 MTMR2Q13614 643 aa27.34■■□□□ 1.97
RBFOX1-219ENST00000569895 NKX2-3Q8TAU0 364 aa27.34■■□□□ 1.97
RBFOX1-219ENST00000569895 DNAJC2Q99543 621 aaKnown RBP27.34■■□□□ 1.97
RBFOX1-219ENST00000569895 SERPINB13Q9UIV8 391 aa27.34■■□□□ 1.97
RBFOX1-219ENST00000569895 PHIPQ8WWQ0 1821 aa27.34■■□□□ 1.97
RBFOX1-219ENST00000569895 PDE4DIPQ5VU43 2346 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms