RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 CILP2Q8IUL8 1156 aa9.17□□□□□ -0.94
CHD9-220ENST00000569794 DCDC2CA8MYV0 355 aa9.16□□□□□ -0.94
CHD9-220ENST00000569794 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.16□□□□□ -0.94
CHD9-220ENST00000569794 FANCGO15287 622 aa9.16□□□□□ -0.94
CHD9-220ENST00000569794 TRIM37O94972 964 aa9.16□□□□□ -0.94
CHD9-220ENST00000569794 ZBTB37Q5TC79 503 aa9.16□□□□□ -0.94
CHD9-220ENST00000569794 C12orf40Q86WS4 652 aa9.16□□□□□ -0.94
CHD9-220ENST00000569794 CCER1Q8TC90 406 aaPredicted RBP9.16□□□□□ -0.94
CHD9-220ENST00000569794 PICK1Q9NRD5 415 aa9.16□□□□□ -0.94
CHD9-220ENST00000569794 PNMA6FA0A0J9YX94 578 aa9.15□□□□□ -0.94
CHD9-220ENST00000569794 GNAT3A8MTJ3 354 aa9.15□□□□□ -0.94
CHD9-220ENST00000569794 ENC1O14682 589 aa9.15□□□□□ -0.94
CHD9-220ENST00000569794 DSC3Q14574 896 aa9.15□□□□□ -0.94
CHD9-220ENST00000569794 ENOX2Q16206 610 aaKnown RBP9.15□□□□□ -0.94
CHD9-220ENST00000569794 KRTAP19-4Q3LI73 84 aa9.15□□□□□ -0.94
CHD9-220ENST00000569794 TPTE2Q6XPS3 522 aa9.15□□□□□ -0.94
CHD9-220ENST00000569794 SOWAHDA6NJG2 315 aa9.14□□□□□ -0.95
CHD9-220ENST00000569794 PAGE1O75459 146 aa9.14□□□□□ -0.95
CHD9-220ENST00000569794 FYB2Q5VWT5 728 aa9.14□□□□□ -0.95
CHD9-220ENST00000569794 LIN37Q96GY3 246 aaPredicted RBP9.14□□□□□ -0.95
CHD9-220ENST00000569794 PRDM5Q9NQX1 630 aaPredicted RBP9.14□□□□□ -0.95
CHD9-220ENST00000569794 LMCD1Q9NZU5 365 aa9.14□□□□□ -0.95
CHD9-220ENST00000569794 MAPK8IP1Q9UQF2 711 aa9.14□□□□□ -0.95
CHD9-220ENST00000569794 SAMM50Q9Y512 469 aa9.14□□□□□ -0.95
CHD9-220ENST00000569794 AFMP43652 599 aa9.13□□□□□ -0.95
CHD9-220ENST00000569794 CDC37L1Q7L3B6 337 aa9.13□□□□□ -0.95
CHD9-220ENST00000569794 ARMCX6Q7L4S7 300 aa9.13□□□□□ -0.95
CHD9-220ENST00000569794 FOXQ1Q9C009 403 aa9.13□□□□□ -0.95
CHD9-220ENST00000569794 CEP44Q9C0F1 390 aa9.13□□□□□ -0.95
CHD9-220ENST00000569794 DCTN4Q9UJW0 460 aa9.13□□□□□ -0.95
CHD9-220ENST00000569794 GSTT1P30711 240 aa9.12□□□□□ -0.95
CHD9-220ENST00000569794 RAP1GAPP47736 663 aa9.12□□□□□ -0.95
CHD9-220ENST00000569794 RASIP1Q5U651 963 aa9.12□□□□□ -0.95
CHD9-220ENST00000569794 LLGL2Q6P1M3 1020 aa9.12□□□□□ -0.95
CHD9-220ENST00000569794 KCT2Q8NC54 265 aa9.12□□□□□ -0.95
CHD9-220ENST00000569794 TREHO43280 583 aa9.11□□□□□ -0.95
CHD9-220ENST00000569794 TSPAN15O95858 294 aa9.11□□□□□ -0.95
CHD9-220ENST00000569794 PLCB3Q01970 1234 aa9.11□□□□□ -0.95
CHD9-220ENST00000569794 KRTAP4-2Q9BYR5 136 aa9.11□□□□□ -0.95
CHD9-220ENST00000569794 PPM1HQ9ULR3 514 aa9.11□□□□□ -0.95
CHD9-220ENST00000569794 PCDHA4Q9UN74 947 aa9.11□□□□□ -0.95
CHD9-220ENST00000569794 FBXO24O75426 580 aa9.1□□□□□ -0.95
CHD9-220ENST00000569794 LRIG2O94898 1065 aa9.1□□□□□ -0.95
CHD9-220ENST00000569794 GLI1P08151 1106 aa9.1□□□□□ -0.95
CHD9-220ENST00000569794 LRRC14Q15048 493 aa9.1□□□□□ -0.95
CHD9-220ENST00000569794 SCARA3Q6AZY7 606 aa9.1□□□□□ -0.95
CHD9-220ENST00000569794 TOX2Q96NM4 488 aa9.1□□□□□ -0.95
CHD9-220ENST00000569794 PPP1R16BQ96T49 567 aa9.1□□□□□ -0.95
CHD9-220ENST00000569794 CARS2Q9HA77 564 aaKnown RBP9.1□□□□□ -0.95
CHD9-220ENST00000569794 SEMA3GQ9NS98 782 aa9.1□□□□□ -0.95
CHD9-220ENST00000569794 SLITRK5O94991 958 aa9.09□□□□□ -0.95
CHD9-220ENST00000569794 CYFIP1Q7L576 1253 aa9.09□□□□□ -0.95
CHD9-220ENST00000569794 RETREG2Q8NC44 543 aa9.09□□□□□ -0.95
CHD9-220ENST00000569794 ZNF507Q8TCN5 953 aa9.09□□□□□ -0.95
CHD9-220ENST00000569794 KIRREL1Q96J84 757 aa9.09□□□□□ -0.95
CHD9-220ENST00000569794 HSPA12BQ96MM6 686 aa9.09□□□□□ -0.95
CHD9-220ENST00000569794 SRCIN1Q9C0H9 1055 aa9.09□□□□□ -0.95
CHD9-220ENST00000569794 ATP13A1Q9HD20 1204 aa9.09□□□□□ -0.95
CHD9-220ENST00000569794 C19orf73Q9NVV2 129 aa9.09□□□□□ -0.95
CHD9-220ENST00000569794 KRTAP9-7A8MTY7 169 aa9.08□□□□□ -0.96
CHD9-220ENST00000569794 PRR33A8MZF0 331 aa9.08□□□□□ -0.96
CHD9-220ENST00000569794 CFPP27918 469 aa9.08□□□□□ -0.96
CHD9-220ENST00000569794 PRR23BQ6ZRT6 265 aa9.08□□□□□ -0.96
CHD9-220ENST00000569794 C22orf34Q6ZV56 151 aa9.08□□□□□ -0.96
CHD9-220ENST00000569794 ELMO3Q96BJ8 720 aa9.08□□□□□ -0.96
CHD9-220ENST00000569794 BIN2Q9UBW5 565 aaPredicted RBP9.08□□□□□ -0.96
CHD9-220ENST00000569794 FAM155AB1AL88 458 aaPredicted RBP9.07□□□□□ -0.96
CHD9-220ENST00000569794 ZNF865P0CJ78 1059 aaPredicted RBP9.07□□□□□ -0.96
CHD9-220ENST00000569794 TMEM67Q5HYA8 995 aa9.07□□□□□ -0.96
CHD9-220ENST00000569794 MPZL3Q6UWV2 235 aa9.07□□□□□ -0.96
CHD9-220ENST00000569794 C1QL4Q86Z23 238 aa9.07□□□□□ -0.96
CHD9-220ENST00000569794 ANKRD24Q8TF21 1146 aa9.07□□□□□ -0.96
CHD9-220ENST00000569794 OSBPL7Q9BZF2 842 aa9.07□□□□□ -0.96
CHD9-220ENST00000569794 CYP8B1Q9UNU6 501 aa9.07□□□□□ -0.96
CHD9-220ENST00000569794 CNTNAP4Q9C0A0 1308 aa9.06□□□□□ -0.96
CHD9-220ENST00000569794 GDNFP39905 211 aa9.06□□□□□ -0.96
CHD9-220ENST00000569794 INPP5AQ14642 412 aa9.06□□□□□ -0.96
CHD9-220ENST00000569794 SYDE1Q6ZW31 735 aaPredicted RBP9.06□□□□□ -0.96
CHD9-220ENST00000569794 NPAS4Q8IUM7 802 aa9.06□□□□□ -0.96
CHD9-220ENST00000569794 MFSD4AQ8N468 514 aa9.06□□□□□ -0.96
CHD9-220ENST00000569794 FBF1Q8TES7 1133 aa9.06□□□□□ -0.96
CHD9-220ENST00000569794 FBRSQ9HAH7 460 aa9.06□□□□□ -0.96
CHD9-220ENST00000569794 TPX2Q9ULW0 747 aaKnown RBP9.06□□□□□ -0.96
CHD9-220ENST00000569794 MAPK1P28482 360 aa9.05□□□□□ -0.96
CHD9-220ENST00000569794 SLBPQ14493 270 aaKnown RBP eCLIP9.05□□□□□ -0.96
CHD9-220ENST00000569794 SFRP5Q5T4F7 317 aa9.05□□□□□ -0.96
CHD9-220ENST00000569794 CDKAL1Q5VV42 579 aa9.05□□□□□ -0.96
CHD9-220ENST00000569794 LRFN4Q6PJG9 635 aa9.05□□□□□ -0.96
CHD9-220ENST00000569794 LRRC56Q8IYG6 542 aaPredicted RBP9.05□□□□□ -0.96
CHD9-220ENST00000569794 PRAMEF27A3QJZ7 478 aa9.04□□□□□ -0.96
CHD9-220ENST00000569794 PDE4CQ08493 712 aa9.04□□□□□ -0.96
CHD9-220ENST00000569794 PCNX4Q63HM2 1172 aa9.04□□□□□ -0.96
CHD9-220ENST00000569794 LCNL1Q6ZST4 164 aa9.04□□□□□ -0.96
CHD9-220ENST00000569794 GNEQ9Y223 722 aaKnown RBP9.04□□□□□ -0.96
CHD9-220ENST00000569794 ST14Q9Y5Y6 855 aa9.04□□□□□ -0.96
CHD9-220ENST00000569794 CAPN6Q9Y6Q1 641 aa9.04□□□□□ -0.96
CHD9-220ENST00000569794 H3BS24 57 aa9.03□□□□□ -0.96
CHD9-220ENST00000569794 KRT1P04264 644 aa9.03□□□□□ -0.96
CHD9-220ENST00000569794 CELA3AP09093 270 aa9.03□□□□□ -0.96
CHD9-220ENST00000569794 CAP2P40123 477 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms