RNA–Protein interactions for RNA: ENST00000569773.1

GDE1-204, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 3

Gene GDE1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-204ENST00000569773 J3QW42 95 aa7.9□□□□□ -1.14
GDE1-204ENST00000569773 SLURP2P0DP57 97 aa7.9□□□□□ -1.14
GDE1-204ENST00000569773 HOXD8P13378 290 aaPredicted RBP7.9□□□□□ -1.14
GDE1-204ENST00000569773 ATP2B2Q01814 1243 aa7.9□□□□□ -1.14
GDE1-204ENST00000569773 HYAL2Q12891 473 aa7.9□□□□□ -1.14
GDE1-204ENST00000569773 C1orf229Q6ZS94 237 aaPredicted RBP7.9□□□□□ -1.14
GDE1-204ENST00000569773 NCAPG2Q86XI2 1143 aa7.9□□□□□ -1.14
GDE1-204ENST00000569773 GIPC2Q8TF65 315 aa7.9□□□□□ -1.14
GDE1-204ENST00000569773 MDFIQ99750 246 aa7.9□□□□□ -1.14
GDE1-204ENST00000569773 SLC6A14Q9UN76 642 aa7.9□□□□□ -1.14
GDE1-204ENST00000569773 KAT6BQ8WYB5 2073 aa7.9□□□□□ -1.15
GDE1-204ENST00000569773 BTAF1O14981 1849 aa7.89□□□□□ -1.15
GDE1-204ENST00000569773 SHANK3Q9BYB0 1731 aa7.89□□□□□ -1.15
GDE1-204ENST00000569773 FAM208AQ9UK61 1670 aaKnown RBP7.89□□□□□ -1.15
GDE1-204ENST00000569773 TTC21AQ8NDW8 1320 aa7.89□□□□□ -1.15
GDE1-204ENST00000569773 ELOA3CA0A087WX78 387 aaPredicted RBP7.89□□□□□ -1.15
GDE1-204ENST00000569773 LOC102724428A0A0B4J2F2 783 aa7.89□□□□□ -1.15
GDE1-204ENST00000569773 ELOA3DA6NLF2 546 aaPredicted RBP7.89□□□□□ -1.15
GDE1-204ENST00000569773 ADARB2-AS1A8MUL3 147 aa7.89□□□□□ -1.15
GDE1-204ENST00000569773 KIF4AO95239 1232 aa7.89□□□□□ -1.15
GDE1-204ENST00000569773 APBA3O96018 575 aa7.89□□□□□ -1.15
GDE1-204ENST00000569773 SIK1P57059 783 aa7.89□□□□□ -1.15
GDE1-204ENST00000569773 ELOA3BQ3SY89 546 aa7.89□□□□□ -1.15
GDE1-204ENST00000569773 PTF1AQ7RTS3 328 aa7.89□□□□□ -1.15
GDE1-204ENST00000569773 ELOA3Q8NG57 546 aa7.89□□□□□ -1.15
GDE1-204ENST00000569773 CCDC74AQ96AQ1 378 aa7.89□□□□□ -1.15
GDE1-204ENST00000569773 NPHS2Q9NP85 383 aa7.89□□□□□ -1.15
GDE1-204ENST00000569773 SALL4Q9UJQ4 1053 aa7.89□□□□□ -1.15
GDE1-204ENST00000569773 NAGPAQ9UK23 515 aa7.89□□□□□ -1.15
GDE1-204ENST00000569773 PAPPAQ13219 1627 aa7.89□□□□□ -1.15
GDE1-204ENST00000569773 KTN1Q86UP2 1357 aaKnown RBP7.88□□□□□ -1.15
GDE1-204ENST00000569773 EPXP11678 715 aa7.88□□□□□ -1.15
GDE1-204ENST00000569773 CPB1P15086 417 aa7.88□□□□□ -1.15
GDE1-204ENST00000569773 ACPPP15309 386 aa7.88□□□□□ -1.15
GDE1-204ENST00000569773 IRS1P35568 1242 aa7.88□□□□□ -1.15
GDE1-204ENST00000569773 PCSK7Q16549 785 aa7.88□□□□□ -1.15
GDE1-204ENST00000569773 LYPD4Q6UWN0 246 aa7.88□□□□□ -1.15
GDE1-204ENST00000569773 FAM35AQ86V20 835 aa7.88□□□□□ -1.15
GDE1-204ENST00000569773 GALNT12Q8IXK2 581 aa7.88□□□□□ -1.15
GDE1-204ENST00000569773 MARCH10Q8NA82 808 aaPredicted RBP7.88□□□□□ -1.15
GDE1-204ENST00000569773 GALNT6Q8NCL4 622 aa7.88□□□□□ -1.15
GDE1-204ENST00000569773 WHAMMQ8TF30 809 aa7.88□□□□□ -1.15
GDE1-204ENST00000569773 LATS2Q9NRM7 1088 aa7.88□□□□□ -1.15
GDE1-204ENST00000569773 COL24A1Q17RW2 1714 aa7.88□□□□□ -1.15
GDE1-204ENST00000569773 TNS2Q63HR2 1409 aa7.87□□□□□ -1.15
GDE1-204ENST00000569773 QSER1Q2KHR3 1735 aa7.87□□□□□ -1.15
GDE1-204ENST00000569773 PLSCR1O15162 318 aa7.87□□□□□ -1.15
GDE1-204ENST00000569773 PRPF40AO75400 957 aaKnown RBP7.87□□□□□ -1.15
GDE1-204ENST00000569773 EDN3P14138 238 aa7.87□□□□□ -1.15
GDE1-204ENST00000569773 EIF2AK2P19525 551 aaKnown RBP7.87□□□□□ -1.15
GDE1-204ENST00000569773 LORP23490 312 aaPredicted RBP7.87□□□□□ -1.15
GDE1-204ENST00000569773 ALG1LQ6GMV1 187 aa7.87□□□□□ -1.15
GDE1-204ENST00000569773 PI16Q6UXB8 463 aa7.87□□□□□ -1.15
GDE1-204ENST00000569773 EPS8L3Q8TE67 593 aaKnown RBP7.87□□□□□ -1.15
GDE1-204ENST00000569773 EDARADDQ8WWZ3 215 aa7.87□□□□□ -1.15
GDE1-204ENST00000569773 SPACA7Q96KW9 195 aa7.87□□□□□ -1.15
GDE1-204ENST00000569773 CARD10Q9BWT7 1032 aa7.87□□□□□ -1.15
GDE1-204ENST00000569773 TUBGCP6Q96RT7 1819 aa7.87□□□□□ -1.15
GDE1-204ENST00000569773 OIP5O43482 229 aa7.86□□□□□ -1.15
GDE1-204ENST00000569773 GHRHP01286 108 aa7.86□□□□□ -1.15
GDE1-204ENST00000569773 CELA2BP08218 269 aaPredicted RBP7.86□□□□□ -1.15
GDE1-204ENST00000569773 BCRP11274 1271 aa7.86□□□□□ -1.15
GDE1-204ENST00000569773 ZNF16P17020 682 aaPredicted RBP7.86□□□□□ -1.15
GDE1-204ENST00000569773 ALAS2P22557 587 aa7.86□□□□□ -1.15
GDE1-204ENST00000569773 DDB1Q16531 1140 aa7.86□□□□□ -1.15
GDE1-204ENST00000569773 PEAR1Q5VY43 1037 aaPredicted RBP7.86□□□□□ -1.15
GDE1-204ENST00000569773 TOM1L2Q6ZVM7 507 aa7.86□□□□□ -1.15
GDE1-204ENST00000569773 CEP120Q8N960 986 aa7.86□□□□□ -1.15
GDE1-204ENST00000569773 KCNH5Q8NCM2 988 aa7.86□□□□□ -1.15
GDE1-204ENST00000569773 FBF1Q8TES7 1133 aa7.86□□□□□ -1.15
GDE1-204ENST00000569773 DUSP9Q99956 384 aaKnown RBP7.86□□□□□ -1.15
GDE1-204ENST00000569773 RNF19AQ9NV58 838 aa7.86□□□□□ -1.15
GDE1-204ENST00000569773 EDC4Q6P2E9 1401 aaKnown RBP7.86□□□□□ -1.15
GDE1-204ENST00000569773 MYOM1P52179 1685 aa7.86□□□□□ -1.15
GDE1-204ENST00000569773 A0A1W2PP64 1363 aa7.85□□□□□ -1.15
GDE1-204ENST00000569773 CCDC7Q96M83 1385 aa7.85□□□□□ -1.15
GDE1-204ENST00000569773 RBM47A0AV96 593 aaKnown RBP7.85□□□□□ -1.15
GDE1-204ENST00000569773 SHISA8B8ZZ34 492 aa7.85□□□□□ -1.15
GDE1-204ENST00000569773 TRPA1O75762 1119 aa7.85□□□□□ -1.15
GDE1-204ENST00000569773 ATP11AP98196 1134 aa7.85□□□□□ -1.15
GDE1-204ENST00000569773 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.85□□□□□ -1.15
GDE1-204ENST00000569773 PERM1Q5SV97 790 aa7.85□□□□□ -1.15
GDE1-204ENST00000569773 NME9Q86XW9 330 aa7.85□□□□□ -1.15
GDE1-204ENST00000569773 TESK2Q96S53 571 aa7.85□□□□□ -1.15
GDE1-204ENST00000569773 LY75O60449 1722 aa7.85□□□□□ -1.15
GDE1-204ENST00000569773 KIF20BQ96Q89 1820 aa7.85□□□□□ -1.15
GDE1-204ENST00000569773 A0A1W2PP55 124 aa7.84□□□□□ -1.15
GDE1-204ENST00000569773 GADD45BO75293 160 aaPredicted RBP7.84□□□□□ -1.15
GDE1-204ENST00000569773 ZNF385CQ66K41 422 aaPredicted RBP7.84□□□□□ -1.15
GDE1-204ENST00000569773 PSAPL1Q6NUJ1 521 aa7.84□□□□□ -1.15
GDE1-204ENST00000569773 ELMSAN1Q6PJG2 1045 aa7.84□□□□□ -1.15
GDE1-204ENST00000569773 ZNF428Q96B54 188 aa7.84□□□□□ -1.15
GDE1-204ENST00000569773 PUS7Q96PZ0 661 aaKnown RBP7.84□□□□□ -1.15
GDE1-204ENST00000569773 OSMRQ99650 979 aa7.84□□□□□ -1.15
GDE1-204ENST00000569773 LPIN3Q9BQK8 851 aa7.84□□□□□ -1.15
GDE1-204ENST00000569773 ZKSCAN3Q9BRR0 538 aa7.84□□□□□ -1.15
GDE1-204ENST00000569773 CARD11Q9BXL7 1154 aa7.84□□□□□ -1.15
GDE1-204ENST00000569773 SMG9Q9H0W8 520 aaKnown RBP7.84□□□□□ -1.15
GDE1-204ENST00000569773 RBSNQ9H1K0 784 aa7.84□□□□□ -1.15
GDE1-204ENST00000569773 RASSF4Q9H2L5 321 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms