RNA–Protein interactions for RNA: ENST00000569518.5

VCPKMT-205, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 2

Gene VCPKMT, Length 1,827 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-205ENST00000569518 FOXD4L3Q6VB84 417 aaPredicted RBP26.38■■□□□ 1.81
VCPKMT-205ENST00000569518 MAPKAPK5Q8IW41 473 aa26.38■■□□□ 1.81
VCPKMT-205ENST00000569518 TMEM87AQ8NBN3 555 aa26.38■■□□□ 1.81
VCPKMT-205ENST00000569518 ZSCAN10Q96SZ4 725 aaPredicted RBP26.38■■□□□ 1.81
VCPKMT-205ENST00000569518 FAM217BQ9NTX9 383 aaPredicted RBP26.38■■□□□ 1.81
VCPKMT-205ENST00000569518 FLT1P17948 1338 aa26.38■■□□□ 1.81
VCPKMT-205ENST00000569518 PSME4Q14997 1843 aa26.38■■□□□ 1.81
VCPKMT-205ENST00000569518 MYH1P12882 1939 aa26.38■■□□□ 1.81
VCPKMT-205ENST00000569518 CPLX1O14810 134 aa26.37■■□□□ 1.81
VCPKMT-205ENST00000569518 RANBP6O60518 1105 aaKnown RBP26.37■■□□□ 1.81
VCPKMT-205ENST00000569518 CDC27P30260 824 aa26.37■■□□□ 1.81
VCPKMT-205ENST00000569518 PDE4BQ07343 736 aa26.37■■□□□ 1.81
VCPKMT-205ENST00000569518 GSE1Q14687 1217 aa26.37■■□□□ 1.81
VCPKMT-205ENST00000569518 KLHL40Q2TBA0 621 aa26.37■■□□□ 1.81
VCPKMT-205ENST00000569518 CCDC93Q567U6 631 aa26.37■■□□□ 1.81
VCPKMT-205ENST00000569518 ENAHQ8N8S7 591 aaPredicted RBP26.37■■□□□ 1.81
VCPKMT-205ENST00000569518 F8W031 263 aaPredicted RBP26.37■■□□□ 1.81
VCPKMT-205ENST00000569518 RXRAP19793 462 aa26.37■■□□□ 1.81
VCPKMT-205ENST00000569518 NT5C2P49902 561 aa26.37■■□□□ 1.81
VCPKMT-205ENST00000569518 HHIPL2Q6UWX4 724 aa26.37■■□□□ 1.81
VCPKMT-205ENST00000569518 MYL10Q9BUA6 226 aa26.37■■□□□ 1.81
VCPKMT-205ENST00000569518 GOLGA8AA7E2F4 631 aa26.36■■□□□ 1.81
VCPKMT-205ENST00000569518 ADD1P35611 737 aaKnown RBP26.36■■□□□ 1.81
VCPKMT-205ENST00000569518 RTKN2Q8IZC4 609 aa26.36■■□□□ 1.81
VCPKMT-205ENST00000569518 PSMD1Q99460 953 aa26.36■■□□□ 1.81
VCPKMT-205ENST00000569518 PPFIA3O75145 1194 aa26.35■■□□□ 1.81
VCPKMT-205ENST00000569518 NTRK3Q16288 839 aa26.35■■□□□ 1.81
VCPKMT-205ENST00000569518 FERMT3Q86UX7 667 aa26.35■■□□□ 1.81
VCPKMT-205ENST00000569518 AMOTL1Q8IY63 956 aa26.35■■□□□ 1.81
VCPKMT-205ENST00000569518 CNPY2Q9Y2B0 182 aa26.35■■□□□ 1.81
VCPKMT-205ENST00000569518 BRCA1P38398 1863 aaKnown RBP26.35■■□□□ 1.81
VCPKMT-205ENST00000569518 ECM29Q5VYK3 1845 aa26.35■■□□□ 1.81
VCPKMT-205ENST00000569518 TGFB2P61812 414 aa26.35■■□□□ 1.81
VCPKMT-205ENST00000569518 IQCA1Q86XH1 822 aa26.35■■□□□ 1.81
VCPKMT-205ENST00000569518 USP17L3A6NCW0 530 aa26.34■■□□□ 1.81
VCPKMT-205ENST00000569518 USP17L4A6NCW7 530 aa26.34■■□□□ 1.81
VCPKMT-205ENST00000569518 H3BQV1 296 aa26.34■■□□□ 1.81
VCPKMT-205ENST00000569518 CDKL5O76039 1030 aa26.34■■□□□ 1.81
VCPKMT-205ENST00000569518 RESTQ13127 1097 aa26.34■■□□□ 1.81
VCPKMT-205ENST00000569518 SLC4A8Q2Y0W8 1093 aa26.34■■□□□ 1.81
VCPKMT-205ENST00000569518 IFFO2Q5TF58 517 aa26.34■■□□□ 1.81
VCPKMT-205ENST00000569518 SYNE3Q6ZMZ3 975 aa26.34■■□□□ 1.81
VCPKMT-205ENST00000569518 USP17L1Q7RTZ2 530 aa26.34■■□□□ 1.81
VCPKMT-205ENST00000569518 ZNF654Q8IZM8 581 aa26.34■■□□□ 1.81
VCPKMT-205ENST00000569518 MRIQ9BWK5 157 aa26.34■■□□□ 1.81
VCPKMT-205ENST00000569518 ORC3Q9UBD5 711 aaPredicted RBP26.34■■□□□ 1.81
VCPKMT-205ENST00000569518 SAP30BPQ9UHR5 308 aaKnown RBP26.34■■□□□ 1.81
VCPKMT-205ENST00000569518 ATF5Q9Y2D1 282 aaPredicted RBP26.34■■□□□ 1.81
VCPKMT-205ENST00000569518 DDX49Q9Y6V7 483 aaKnown RBP26.34■■□□□ 1.81
VCPKMT-205ENST00000569518 PPIP5K2O43314 1243 aa26.33■■□□□ 1.81
VCPKMT-205ENST00000569518 POLD1P28340 1107 aa26.33■■□□□ 1.81
VCPKMT-205ENST00000569518 SCNN1DP51172 638 aa26.33■■□□□ 1.81
VCPKMT-205ENST00000569518 PLCD1P51178 756 aa26.33■■□□□ 1.81
VCPKMT-205ENST00000569518 DNM1Q05193 864 aaKnown RBP26.33■■□□□ 1.81
VCPKMT-205ENST00000569518 TEKT1Q969V4 418 aa26.33■■□□□ 1.81
VCPKMT-205ENST00000569518 DYNLL2Q96FJ2 89 aa26.33■■□□□ 1.81
VCPKMT-205ENST00000569518 CCDC144CPQ8IYA2 1237 aa26.32■■□□□ 1.8
VCPKMT-205ENST00000569518 GDPD2Q9HCC8 539 aa26.32■■□□□ 1.8
VCPKMT-205ENST00000569518 MYH15Q9Y2K3 1946 aa26.32■■□□□ 1.8
VCPKMT-205ENST00000569518 POLR3DP05423 398 aaPredicted RBP26.32■■□□□ 1.8
VCPKMT-205ENST00000569518 FAM47AQ5JRC9 791 aa26.32■■□□□ 1.8
VCPKMT-205ENST00000569518 APOBEC3HQ6NTF7 200 aaKnown RBP26.32■■□□□ 1.8
VCPKMT-205ENST00000569518 USP48Q86UV5 1035 aa26.32■■□□□ 1.8
VCPKMT-205ENST00000569518 GPT2Q8TD30 523 aa26.32■■□□□ 1.8
VCPKMT-205ENST00000569518 YDJCA8MPS7 323 aa26.31■■□□□ 1.8
VCPKMT-205ENST00000569518 WDHD1O75717 1129 aaPredicted RBP26.31■■□□□ 1.8
VCPKMT-205ENST00000569518 HDLBPQ00341 1268 aaKnown RBP26.31■■□□□ 1.8
VCPKMT-205ENST00000569518 CPLX2Q6PUV4 134 aaKnown RBP26.31■■□□□ 1.8
VCPKMT-205ENST00000569518 RGS22Q8NE09 1264 aa26.31■■□□□ 1.8
VCPKMT-205ENST00000569518 ZDHHC15Q96MV8 337 aa26.31■■□□□ 1.8
VCPKMT-205ENST00000569518 COL4A5P29400 1685 aa26.31■■□□□ 1.8
VCPKMT-205ENST00000569518 R3HDM1Q15032 1099 aaKnown RBP26.3■■□□□ 1.8
VCPKMT-205ENST00000569518 RTN1Q16799 776 aa26.3■■□□□ 1.8
VCPKMT-205ENST00000569518 IFIT1BQ5T764 474 aaKnown RBP26.3■■□□□ 1.8
VCPKMT-205ENST00000569518 ZSCAN16Q9H4T2 348 aaPredicted RBP26.3■■□□□ 1.8
VCPKMT-205ENST00000569518 STK36Q9NRP7 1315 aa26.3■■□□□ 1.8
VCPKMT-205ENST00000569518 CRKP46108 304 aa26.3■■□□□ 1.8
VCPKMT-205ENST00000569518 C16orf86Q6ZW13 317 aa26.3■■□□□ 1.8
VCPKMT-205ENST00000569518 ILDR1Q86SU0 546 aaPredicted RBP26.3■■□□□ 1.8
VCPKMT-205ENST00000569518 SGIP1Q9BQI5 828 aa26.3■■□□□ 1.8
VCPKMT-205ENST00000569518 GZF1Q9H116 711 aaPredicted RBP26.3■■□□□ 1.8
VCPKMT-205ENST00000569518 NMT2O60551 498 aa26.29■■□□□ 1.8
VCPKMT-205ENST00000569518 IFNAR1P17181 557 aa26.29■■□□□ 1.8
VCPKMT-205ENST00000569518 CDC42EP5Q6NZY7 148 aa26.29■■□□□ 1.8
VCPKMT-205ENST00000569518 FAM173BQ6P4H8 233 aa26.29■■□□□ 1.8
VCPKMT-205ENST00000569518 KIAA0825Q8IV33 1275 aa26.29■■□□□ 1.8
VCPKMT-205ENST00000569518 FANCBQ8NB91 859 aa26.29■■□□□ 1.8
VCPKMT-205ENST00000569518 UPF1Q92900 1129 aaKnown RBP eCLIP26.29■■□□□ 1.8
VCPKMT-205ENST00000569518 PIM2Q9P1W9 311 aa26.29■■□□□ 1.8
VCPKMT-205ENST00000569518 TSPY2A6NKD2 308 aa26.28■■□□□ 1.8
VCPKMT-205ENST00000569518 FOSBP53539 338 aa26.28■■□□□ 1.8
VCPKMT-205ENST00000569518 SOGA3Q5TF21 947 aa26.28■■□□□ 1.8
VCPKMT-205ENST00000569518 SLC44A5Q8NCS7 719 aa26.28■■□□□ 1.8
VCPKMT-205ENST00000569518 RASA1P20936 1047 aa26.28■■□□□ 1.8
VCPKMT-205ENST00000569518 PPP2R5BQ15173 497 aa26.28■■□□□ 1.8
VCPKMT-205ENST00000569518 RCSD1Q6JBY9 416 aa26.28■■□□□ 1.8
VCPKMT-205ENST00000569518 FBXO18Q8NFZ0 1043 aa26.28■■□□□ 1.8
VCPKMT-205ENST00000569518 PHKBQ93100 1093 aa26.28■■□□□ 1.8
VCPKMT-205ENST00000569518 C8orf76Q96K31 380 aa26.28■■□□□ 1.8
VCPKMT-205ENST00000569518 VPS33BQ9H267 617 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms