RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 SMC3Q9UQE7 1217 aa8.99□□□□□ -0.97
CDH13-214ENST00000569455 DAGLAQ9Y4D2 1042 aa8.99□□□□□ -0.97
CDH13-214ENST00000569455 COL4A5P29400 1685 aa8.99□□□□□ -0.97
CDH13-214ENST00000569455 ERICH2A1L162 156 aa8.98□□□□□ -0.97
CDH13-214ENST00000569455 YDJCA8MPS7 323 aa8.98□□□□□ -0.97
CDH13-214ENST00000569455 B4E1Z4 1266 aa8.98□□□□□ -0.97
CDH13-214ENST00000569455 KDM4AO75164 1064 aa8.98□□□□□ -0.97
CDH13-214ENST00000569455 LMOD1P29536 600 aaPredicted RBP8.98□□□□□ -0.97
CDH13-214ENST00000569455 RRP12Q5JTH9 1297 aaKnown RBP8.98□□□□□ -0.97
CDH13-214ENST00000569455 RSBN1LQ6PCB5 846 aaPredicted RBP8.98□□□□□ -0.97
CDH13-214ENST00000569455 PNMA8AQ86V59 439 aaPredicted RBP8.98□□□□□ -0.97
CDH13-214ENST00000569455 CCDC83Q8IWF9 413 aa8.98□□□□□ -0.97
CDH13-214ENST00000569455 TGFBRAP1Q8WUH2 860 aa8.98□□□□□ -0.97
CDH13-214ENST00000569455 GTF3C6Q969F1 213 aa8.98□□□□□ -0.97
CDH13-214ENST00000569455 ZNF274Q96GC6 653 aaPredicted RBP8.98□□□□□ -0.97
CDH13-214ENST00000569455 LARP6Q9BRS8 491 aaKnown RBP8.98□□□□□ -0.97
CDH13-214ENST00000569455 LRRC2Q9BYS8 371 aa8.98□□□□□ -0.97
CDH13-214ENST00000569455 ZNF287Q9HBT7 754 aa8.98□□□□□ -0.97
CDH13-214ENST00000569455 ANGEL1Q9UNK9 670 aaKnown RBP8.98□□□□□ -0.97
CDH13-214ENST00000569455 NEDD4P46934 1319 aa8.98□□□□□ -0.97
CDH13-214ENST00000569455 MYH8P13535 1937 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 DDX60LQ5H9U9 1706 aaKnown RBP8.97□□□□□ -0.97
CDH13-214ENST00000569455 SH2B2O14492 632 aaPredicted RBP8.97□□□□□ -0.97
CDH13-214ENST00000569455 IFIT3O14879 490 aaKnown RBP8.97□□□□□ -0.97
CDH13-214ENST00000569455 TNRC18O15417 2968 aaPredicted RBP8.97□□□□□ -0.97
CDH13-214ENST00000569455 ORC4O43929 436 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 DHX16O60231 1041 aaKnown RBP8.97□□□□□ -0.97
CDH13-214ENST00000569455 PFKFB2O60825 505 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 DDNO94850 711 aaPredicted RBP8.97□□□□□ -0.97
CDH13-214ENST00000569455 LARGE1O95461 756 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 POLR3DP05423 398 aaPredicted RBP8.97□□□□□ -0.97
CDH13-214ENST00000569455 FGRP09769 529 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 LIFRP42702 1097 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 CRKP46108 304 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 SCNN1DP51172 638 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 EVCP57679 992 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 ANTXR2P58335 489 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 RHBDL3P58872 404 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 APOBRQ0VD83 1088 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 COL9A3Q14050 684 aaPredicted RBP8.97□□□□□ -0.97
CDH13-214ENST00000569455 RAB3GAP1Q15042 981 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 TMEM67Q5HYA8 995 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 C12orf60Q5U649 245 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 CHADLQ6NUI6 762 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 CHST3Q7LGC8 479 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 KIAA0825Q8IV33 1275 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 MAPKAPK5Q8IW41 473 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 TMTC2Q8N394 836 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 ZDHHC15Q96MV8 337 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 LLPHQ9BRT6 129 aaKnown RBP8.97□□□□□ -0.97
CDH13-214ENST00000569455 UBAC1Q9BSL1 405 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 MXD3Q9BW11 206 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 KCNQ5Q9NR82 932 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 USP40Q9NVE5 1235 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 GPRC5DQ9NZD1 345 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 HACL1Q9UJ83 578 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 SERPINA10Q9UK55 444 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 HDAC9Q9UKV0 1011 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 NAP1L2Q9ULW6 460 aaPredicted RBP8.97□□□□□ -0.97
CDH13-214ENST00000569455 KIF3AQ9Y496 699 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 ZNF541Q9H0D2 1346 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 ROBO3Q96MS0 1386 aa8.97□□□□□ -0.97
CDH13-214ENST00000569455 ADAMTSL1Q8N6G6 1762 aa8.96□□□□□ -0.97
CDH13-214ENST00000569455 CYP2D7A0A087X1C5 515 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 KLF18A0A0U1RQI7 1052 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 CCDC69A6NI79 296 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 H7C1D1 291 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 PSMD14O00487 310 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 RAD17O75943 681 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 USP17L8P0C7I0 530 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 PDCP20941 246 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 VEGFBP49765 207 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 RBM5P52756 815 aaKnown RBP eCLIP8.96□□□□□ -0.98
CDH13-214ENST00000569455 STK3Q13188 491 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 WTAPQ15007 396 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 CCDC178Q5BJE1 867 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 SYNE3Q6ZMZ3 975 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 NFXL1Q6ZNB6 911 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 USP50Q70EL3 339 aaPredicted RBP8.96□□□□□ -0.98
CDH13-214ENST00000569455 CYB5R4Q7L1T6 521 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 TTC6Q86TZ1 520 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 IQCA1Q86XH1 822 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 OGFOD1Q8N543 542 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 NECAB1Q8N987 351 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 ZC3H15Q8WU90 426 aaKnown RBP8.96□□□□□ -0.98
CDH13-214ENST00000569455 GBP4Q96PP9 640 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 GMLQ99445 158 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 ADARB2Q9NS39 739 aaKnown RBP8.96□□□□□ -0.98
CDH13-214ENST00000569455 ZSWIM5Q9P217 1185 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.96□□□□□ -0.98
CDH13-214ENST00000569455 GJA3Q9Y6H8 435 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 FLT1P17948 1338 aa8.96□□□□□ -0.98
CDH13-214ENST00000569455 GOLGA8BA8MQT2 603 aa8.95□□□□□ -0.98
CDH13-214ENST00000569455 POTECB2RU33 542 aa8.95□□□□□ -0.98
CDH13-214ENST00000569455 RANBP6O60518 1105 aaKnown RBP8.95□□□□□ -0.98
CDH13-214ENST00000569455 CYP2D6P10635 497 aa8.95□□□□□ -0.98
CDH13-214ENST00000569455 GJB2P29033 226 aa8.95□□□□□ -0.98
CDH13-214ENST00000569455 PDIA3P30101 505 aaKnown RBP8.95□□□□□ -0.98
CDH13-214ENST00000569455 GMPSP49915 693 aaPredicted RBP8.95□□□□□ -0.98
CDH13-214ENST00000569455 ZNF280AP59817 542 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms