RNA–Protein interactions for RNA: ENST00000569454.1

CDH13-213, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-213ENST00000569454 SLC3A2P08195 630 aaKnown RBP6.65□□□□□ -1.34
CDH13-213ENST00000569454 CALM1P0DP23 149 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 CALM2P0DP24 149 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 CALM3P0DP25 149 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 IFNAR1P17181 557 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 XBP1P17861 261 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 LIG1P18858 919 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 CYP7A1P22680 504 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 ADD1P35611 737 aaKnown RBP6.65□□□□□ -1.34
CDH13-213ENST00000569454 IARSP41252 1262 aaKnown RBP6.65□□□□□ -1.34
CDH13-213ENST00000569454 TERF1P54274 439 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 RPS8P62241 208 aaKnown RBP6.65□□□□□ -1.34
CDH13-213ENST00000569454 HTRA3P83110 453 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 KIAA2012Q0VF49 1180 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 DHX8Q14562 1220 aaKnown RBP6.65□□□□□ -1.34
CDH13-213ENST00000569454 STK38Q15208 465 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 SAFBQ15424 915 aaKnown RBP eCLIP6.65□□□□□ -1.34
CDH13-213ENST00000569454 ZRSR1Q15695 479 aaKnown RBP6.65□□□□□ -1.34
CDH13-213ENST00000569454 STX1AQ16623 288 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 SLFNL1Q499Z3 407 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 ERFEQ4G0M1 354 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 MYSM1Q5VVJ2 828 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 SPTY2D1Q68D10 685 aaPredicted RBP6.65□□□□□ -1.34
CDH13-213ENST00000569454 ADALQ6DHV7 355 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 NFXL1Q6ZNB6 911 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.65□□□□□ -1.34
CDH13-213ENST00000569454 HELBQ8NG08 1087 aaPredicted RBP6.65□□□□□ -1.34
CDH13-213ENST00000569454 MRPS27Q92552 414 aaKnown RBP6.65□□□□□ -1.34
CDH13-213ENST00000569454 L3MBTL3Q96JM7 780 aaPredicted RBP6.65□□□□□ -1.34
CDH13-213ENST00000569454 UBAC1Q9BSL1 405 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 NBPF3Q9H094 633 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 NAT10Q9H0A0 1025 aaKnown RBP6.65□□□□□ -1.34
CDH13-213ENST00000569454 LY9Q9HBG7 655 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 NCOA5Q9HCD5 579 aaKnown RBP6.65□□□□□ -1.34
CDH13-213ENST00000569454 MINPP1Q9UNW1 487 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 SLC4A4Q9Y6R1 1079 aa6.65□□□□□ -1.34
CDH13-213ENST00000569454 KIAA1551Q9HCM1 1747 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 MAGEB6P1A0A0J9YX57 407 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 CCDC85CA6NKD9 419 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 FAM177BA6PVY3 158 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 B4E1Z4 1266 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 FDPSP14324 419 aaKnown RBP6.64□□□□□ -1.35
CDH13-213ENST00000569454 ME1P48163 572 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 BCAMP50895 628 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 KIF23Q02241 960 aaPredicted RBP6.64□□□□□ -1.35
CDH13-213ENST00000569454 SSRP1Q08945 709 aaKnown RBP6.64□□□□□ -1.35
CDH13-213ENST00000569454 GNL2Q13823 731 aaKnown RBP6.64□□□□□ -1.35
CDH13-213ENST00000569454 WTAPQ15007 396 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 SF3A1Q15459 793 aaKnown RBP6.64□□□□□ -1.35
CDH13-213ENST00000569454 FAM173BQ6P4H8 233 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 PAXIP1Q6ZW49 1069 aaPredicted RBP6.64□□□□□ -1.35
CDH13-213ENST00000569454 CHST3Q7LGC8 479 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 FBXO33Q7Z6M2 555 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 MICU3Q86XE3 530 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 IQCA1Q86XH1 822 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 LCORLQ8N3X6 602 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 LINC00301Q8NCQ3 95 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 TDRD7Q8NHU6 1098 aaKnown RBP6.64□□□□□ -1.35
CDH13-213ENST00000569454 IGDCC4Q8TDY8 1250 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 CCDC34Q96HJ3 373 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 PGBD1Q96JS3 809 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 USP28Q96RU2 1077 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 ALG1Q9BT22 464 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 CRNKL1Q9BZJ0 848 aaKnown RBP6.64□□□□□ -1.35
CDH13-213ENST00000569454 BCL11BQ9C0K0 894 aaPredicted RBP6.64□□□□□ -1.35
CDH13-213ENST00000569454 ARMT1Q9H993 441 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 RBM28Q9NW13 759 aaKnown RBP6.64□□□□□ -1.35
CDH13-213ENST00000569454 ANO10Q9NW15 660 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 RAI14Q9P0K7 980 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 TFIP11Q9UBB9 837 aaKnown RBP6.64□□□□□ -1.35
CDH13-213ENST00000569454 ARPP21Q9UBL0 812 aaPredicted RBP6.64□□□□□ -1.35
CDH13-213ENST00000569454 LEMD3Q9Y2U8 911 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 MORC2Q9Y6X9 1032 aaPredicted RBP6.64□□□□□ -1.35
CDH13-213ENST00000569454 NEDD4P46934 1319 aa6.64□□□□□ -1.35
CDH13-213ENST00000569454 A0A0G2JLW4 131 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 GOLGA6L19H0YKK7 550 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 NPHP1O15259 732 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 SPTLC2O15270 562 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 ONECUT3O60422 494 aaPredicted RBP6.63□□□□□ -1.35
CDH13-213ENST00000569454 PPP6R2O75170 966 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 NR1I2O75469 434 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 DDAH1O94760 285 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 DEXIO95424 95 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 FMNL1O95466 1100 aaPredicted RBP6.63□□□□□ -1.35
CDH13-213ENST00000569454 ADCY5O95622 1261 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 BMP15O95972 392 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 U2AF2P26368 475 aaKnown RBP eCLIP6.63□□□□□ -1.35
CDH13-213ENST00000569454 HIBADHP31937 336 aaKnown RBP6.63□□□□□ -1.35
CDH13-213ENST00000569454 RFC4P35249 363 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 GSTO1P78417 241 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 PPARAQ07869 468 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 CACNA1SQ13698 1873 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 RTN1Q16799 776 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 CCDC178Q5BJE1 867 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 SLC27A3Q5K4L6 730 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 TBC1D9BQ66K14 1250 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 C15orf52Q6ZUT6 534 aaKnown RBP6.63□□□□□ -1.35
CDH13-213ENST00000569454 C3orf67Q6ZVT6 689 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 CYB5R4Q7L1T6 521 aa6.63□□□□□ -1.35
CDH13-213ENST00000569454 TMC4Q7Z404 712 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms