RNA–Protein interactions for RNA: ENST00000569357.4

TCF4-243, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-243ENST00000569357 ZEB1P37275 1124 aaPredicted RBP11.47□□□□□ -0.57
TCF4-243ENST00000569357 EPHA10Q5JZY3 1008 aa11.47□□□□□ -0.57
TCF4-243ENST00000569357 CDC42EP5Q6NZY7 148 aa11.47□□□□□ -0.57
TCF4-243ENST00000569357 FBXO33Q7Z6M2 555 aa11.47□□□□□ -0.57
TCF4-243ENST00000569357 CCDC84Q86UT8 332 aaPredicted RBP11.47□□□□□ -0.57
TCF4-243ENST00000569357 ZSCAN29Q8IWY8 852 aaPredicted RBP11.47□□□□□ -0.57
TCF4-243ENST00000569357 MRIQ9BWK5 157 aa11.47□□□□□ -0.57
TCF4-243ENST00000569357 KRTAP3-3Q9BYR6 98 aa11.47□□□□□ -0.57
TCF4-243ENST00000569357 KRTAP3-2Q9BYR7 98 aa11.47□□□□□ -0.57
TCF4-243ENST00000569357 SENP6Q9GZR1 1112 aaPredicted RBP11.47□□□□□ -0.57
TCF4-243ENST00000569357 GJD2Q9UKL4 321 aa11.47□□□□□ -0.57
TCF4-243ENST00000569357 PNMA3Q9UL41 463 aa11.47□□□□□ -0.57
TCF4-243ENST00000569357 PCDHB8Q9UN66 801 aa11.47□□□□□ -0.57
TCF4-243ENST00000569357 APAF1O14727 1248 aa11.46□□□□□ -0.57
TCF4-243ENST00000569357 COL6A1P12109 1028 aa11.46□□□□□ -0.57
TCF4-243ENST00000569357 EMP3P54852 163 aa11.46□□□□□ -0.57
TCF4-243ENST00000569357 FLIIQ13045 1269 aa11.46□□□□□ -0.57
TCF4-243ENST00000569357 RALBP1Q15311 655 aa11.46□□□□□ -0.57
TCF4-243ENST00000569357 SHHQ15465 462 aa11.46□□□□□ -0.57
TCF4-243ENST00000569357 TREML2Q5T2D2 321 aa11.46□□□□□ -0.57
TCF4-243ENST00000569357 ZFPM1Q8IX07 1006 aa11.46□□□□□ -0.57
TCF4-243ENST00000569357 TSR2Q969E8 191 aaKnown RBP11.46□□□□□ -0.57
TCF4-243ENST00000569357 USP40Q9NVE5 1235 aa11.46□□□□□ -0.57
TCF4-243ENST00000569357 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.46□□□□□ -0.57
TCF4-243ENST00000569357 ZBTB47Q9UFB7 747 aaPredicted RBP11.46□□□□□ -0.57
TCF4-243ENST00000569357 AGTPBP1Q9UPW5 1226 aa11.46□□□□□ -0.57
TCF4-243ENST00000569357 GCLCP48506 637 aaPredicted RBP11.45□□□□□ -0.58
TCF4-243ENST00000569357 DIXDC1Q155Q3 683 aa11.45□□□□□ -0.58
TCF4-243ENST00000569357 TTYH1Q9H313 450 aaPredicted RBP11.45□□□□□ -0.58
TCF4-243ENST00000569357 FAM198AQ9UFP1 575 aa11.45□□□□□ -0.58
TCF4-243ENST00000569357 DAGLAQ9Y4D2 1042 aa11.45□□□□□ -0.58
TCF4-243ENST00000569357 COL2A1P02458 1487 aaPredicted RBP11.44□□□□□ -0.58
TCF4-243ENST00000569357 A0A1B0GUL6 1792 aa11.44□□□□□ -0.58
TCF4-243ENST00000569357 PHF20L1A8MW92 1017 aa11.44□□□□□ -0.58
TCF4-243ENST00000569357 SLURP2P0DP57 97 aa11.44□□□□□ -0.58
TCF4-243ENST00000569357 CCND3P30281 292 aaPredicted RBP11.44□□□□□ -0.58
TCF4-243ENST00000569357 TWISTNBQ3B726 338 aaPredicted RBP11.44□□□□□ -0.58
TCF4-243ENST00000569357 METTL24Q5JXM2 366 aa11.44□□□□□ -0.58
TCF4-243ENST00000569357 C9orf50Q5SZB4 431 aa11.44□□□□□ -0.58
TCF4-243ENST00000569357 MAP3K21Q5TCX8 1036 aa11.44□□□□□ -0.58
TCF4-243ENST00000569357 PPM1EQ8WY54 764 aa11.44□□□□□ -0.58
TCF4-243ENST00000569357 NUDT12Q9BQG2 462 aa11.44□□□□□ -0.58
TCF4-243ENST00000569357 PRDM5Q9NQX1 630 aaPredicted RBP11.44□□□□□ -0.58
TCF4-243ENST00000569357 SUGT1Q9Y2Z0 365 aa11.44□□□□□ -0.58
TCF4-243ENST00000569357 AK9Q5TCS8 1911 aa11.43□□□□□ -0.58
TCF4-243ENST00000569357 MROH5Q6ZUA9 1318 aa11.43□□□□□ -0.58
TCF4-243ENST00000569357 F6X3S4 739 aa11.43□□□□□ -0.58
TCF4-243ENST00000569357 ZKSCAN1P17029 563 aaPredicted RBP11.43□□□□□ -0.58
TCF4-243ENST00000569357 CACNB2Q08289 660 aaPredicted RBP11.43□□□□□ -0.58
TCF4-243ENST00000569357 MAP3K12Q12852 859 aa11.43□□□□□ -0.58
TCF4-243ENST00000569357 CCAR1Q8IX12 1150 aaKnown RBP11.43□□□□□ -0.58
TCF4-243ENST00000569357 USP38Q8NB14 1042 aa11.43□□□□□ -0.58
TCF4-243ENST00000569357 C9orf78Q9NZ63 289 aaPredicted RBP11.43□□□□□ -0.58
TCF4-243ENST00000569357 VCANP13611 3396 aa11.42□□□□□ -0.58
TCF4-243ENST00000569357 GRM8O00222 908 aa11.42□□□□□ -0.58
TCF4-243ENST00000569357 CTNND1O60716 968 aaKnown RBP11.42□□□□□ -0.58
TCF4-243ENST00000569357 RGS3P49796 1198 aa11.42□□□□□ -0.58
TCF4-243ENST00000569357 SPP2Q13103 211 aa11.42□□□□□ -0.58
TCF4-243ENST00000569357 PABPC4Q13310 644 aaKnown RBP eCLIP11.42□□□□□ -0.58
TCF4-243ENST00000569357 PDE3AQ14432 1141 aa11.42□□□□□ -0.58
TCF4-243ENST00000569357 PDCD7Q8N8D1 485 aaKnown RBP11.42□□□□□ -0.58
TCF4-243ENST00000569357 HS3ST6Q96QI5 342 aa11.42□□□□□ -0.58
TCF4-243ENST00000569357 ATP11BQ9Y2G3 1177 aa11.42□□□□□ -0.58
TCF4-243ENST00000569357 PEX10O60683 326 aa11.41□□□□□ -0.58
TCF4-243ENST00000569357 HMGCS2P54868 508 aa11.41□□□□□ -0.58
TCF4-243ENST00000569357 RTP1P59025 263 aa11.41□□□□□ -0.58
TCF4-243ENST00000569357 SMAD3P84022 425 aaKnown RBP11.41□□□□□ -0.58
TCF4-243ENST00000569357 LRRC24Q50LG9 513 aa11.41□□□□□ -0.58
TCF4-243ENST00000569357 WDR66Q8TBY9 1149 aa11.41□□□□□ -0.58
TCF4-243ENST00000569357 SOCS4Q8WXH5 440 aa11.41□□□□□ -0.58
TCF4-243ENST00000569357 ASCC2Q9H1I8 757 aaPredicted RBP11.41□□□□□ -0.58
TCF4-243ENST00000569357 CWC22Q9HCG8 908 aaKnown RBP11.41□□□□□ -0.58
TCF4-243ENST00000569357 DOCK3Q8IZD9 2030 aa11.41□□□□□ -0.58
TCF4-243ENST00000569357 MYBBP1AQ9BQG0 1328 aaKnown RBP11.4□□□□□ -0.58
TCF4-243ENST00000569357 FAM205CA6NFA0 338 aa11.4□□□□□ -0.58
TCF4-243ENST00000569357 IFIT1P09914 478 aaKnown RBP11.4□□□□□ -0.58
TCF4-243ENST00000569357 CNGA1P29973 690 aa11.4□□□□□ -0.58
TCF4-243ENST00000569357 PRDX5P30044 214 aa11.4□□□□□ -0.58
TCF4-243ENST00000569357 IRX3P78415 501 aaPredicted RBP11.4□□□□□ -0.58
TCF4-243ENST00000569357 PICALMQ13492 652 aa11.4□□□□□ -0.58
TCF4-243ENST00000569357 GRIN2CQ14957 1233 aa11.4□□□□□ -0.58
TCF4-243ENST00000569357 CCL14Q16627 93 aa11.4□□□□□ -0.58
TCF4-243ENST00000569357 BEND3Q5T5X7 828 aa11.4□□□□□ -0.58
TCF4-243ENST00000569357 TRMT44Q8IYL2 757 aaKnown RBP11.4□□□□□ -0.58
TCF4-243ENST00000569357 PROCA1Q8NCQ7 364 aaPredicted RBP11.4□□□□□ -0.58
TCF4-243ENST00000569357 IL27Q8NEV9 243 aa11.4□□□□□ -0.58
TCF4-243ENST00000569357 ADAMTS19Q8TE59 1207 aa11.4□□□□□ -0.58
TCF4-243ENST00000569357 BADQ92934 168 aa11.4□□□□□ -0.58
TCF4-243ENST00000569357 DDTLA6NHG4 134 aaPredicted RBP11.39□□□□□ -0.59
TCF4-243ENST00000569357 FAM196BA6NMK8 535 aa11.39□□□□□ -0.59
TCF4-243ENST00000569357 ENTPD3O75355 529 aa11.39□□□□□ -0.59
TCF4-243ENST00000569357 PDE8BO95263 885 aa11.39□□□□□ -0.59
TCF4-243ENST00000569357 LDHBP07195 334 aaKnown RBP11.39□□□□□ -0.59
TCF4-243ENST00000569357 XRCC5P13010 732 aaKnown RBP11.39□□□□□ -0.59
TCF4-243ENST00000569357 ZNF280CQ8ND82 737 aa11.39□□□□□ -0.59
TCF4-243ENST00000569357 ATRNL1Q5VV63 1379 aa11.39□□□□□ -0.59
TCF4-243ENST00000569357 RGS2P41220 211 aa11.38□□□□□ -0.59
TCF4-243ENST00000569357 SLC4A10Q6U841 1118 aa11.38□□□□□ -0.59
TCF4-243ENST00000569357 SH3BP5LQ7L8J4 393 aa11.38□□□□□ -0.59
TCF4-243ENST00000569357 GPRC5AQ8NFJ5 357 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms