RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 LDHBP07195 334 aaKnown RBP13.89□□□□□ -0.19
CHRFAM7A-206ENST00000569278 CCL5P13501 91 aa13.89□□□□□ -0.19
CHRFAM7A-206ENST00000569278 ATN1P54259 1190 aaPredicted RBP13.89□□□□□ -0.19
CHRFAM7A-206ENST00000569278 TRMT2AQ8IZ69 625 aaKnown RBP13.89□□□□□ -0.19
CHRFAM7A-206ENST00000569278 SCYL3Q8IZE3 742 aa13.89□□□□□ -0.19
CHRFAM7A-206ENST00000569278 PARK7Q99497 189 aaKnown RBP13.89□□□□□ -0.19
CHRFAM7A-206ENST00000569278 UNC93B1Q9H1C4 597 aa13.89□□□□□ -0.19
CHRFAM7A-206ENST00000569278 AFG3L2Q9Y4W6 797 aa13.89□□□□□ -0.19
CHRFAM7A-206ENST00000569278 CXCL11O14625 94 aa13.88□□□□□ -0.19
CHRFAM7A-206ENST00000569278 GJB1P08034 283 aa13.88□□□□□ -0.19
CHRFAM7A-206ENST00000569278 RHBDL3P58872 404 aa13.88□□□□□ -0.19
CHRFAM7A-206ENST00000569278 ALDH1L2Q3SY69 923 aa13.88□□□□□ -0.19
CHRFAM7A-206ENST00000569278 CCDC102BQ68D86 513 aa13.88□□□□□ -0.19
CHRFAM7A-206ENST00000569278 MEIS3Q99687 375 aa13.88□□□□□ -0.19
CHRFAM7A-206ENST00000569278 PPP4R2Q9NY27 417 aa13.88□□□□□ -0.19
CHRFAM7A-206ENST00000569278 LRRFIP2Q9Y608 721 aaKnown RBP13.88□□□□□ -0.19
CHRFAM7A-206ENST00000569278 CDK5RAP2Q96SN8 1893 aa13.88□□□□□ -0.19
CHRFAM7A-206ENST00000569278 DNAH12Q6ZR08 3092 aa13.88□□□□□ -0.19
CHRFAM7A-206ENST00000569278 PDS5AQ29RF7 1337 aaKnown RBP13.88□□□□□ -0.19
CHRFAM7A-206ENST00000569278 MAST2Q6P0Q8 1798 aa13.87□□□□□ -0.19
CHRFAM7A-206ENST00000569278 SEMA3EO15041 775 aa13.87□□□□□ -0.19
CHRFAM7A-206ENST00000569278 ENTPD3O75355 529 aa13.87□□□□□ -0.19
CHRFAM7A-206ENST00000569278 FMNL1O95466 1100 aaPredicted RBP13.87□□□□□ -0.19
CHRFAM7A-206ENST00000569278 RRP1BQ14684 758 aaKnown RBP13.87□□□□□ -0.19
CHRFAM7A-206ENST00000569278 RAET1EQ8TD07 263 aa13.87□□□□□ -0.19
CHRFAM7A-206ENST00000569278 COPRSQ9NQ92 184 aa13.87□□□□□ -0.19
CHRFAM7A-206ENST00000569278 SMC4Q9NTJ3 1288 aa13.87□□□□□ -0.19
CHRFAM7A-206ENST00000569278 DENND2AQ9ULE3 1009 aa13.87□□□□□ -0.19
CHRFAM7A-206ENST00000569278 ZHX2Q9Y6X8 837 aa13.87□□□□□ -0.19
CHRFAM7A-206ENST00000569278 UNC80Q8N2C7 3258 aa13.87□□□□□ -0.19
CHRFAM7A-206ENST00000569278 EYSQ5T1H1 3165 aa13.86□□□□□ -0.19
CHRFAM7A-206ENST00000569278 FAM196BA6NMK8 535 aa13.86□□□□□ -0.19
CHRFAM7A-206ENST00000569278 STK25O00506 426 aa13.86□□□□□ -0.19
CHRFAM7A-206ENST00000569278 ELNP15502 786 aa13.86□□□□□ -0.19
CHRFAM7A-206ENST00000569278 TREML2Q5T2D2 321 aa13.86□□□□□ -0.19
CHRFAM7A-206ENST00000569278 PI16Q6UXB8 463 aa13.86□□□□□ -0.19
CHRFAM7A-206ENST00000569278 U2AF1L4Q8WU68 220 aaKnown RBP13.86□□□□□ -0.19
CHRFAM7A-206ENST00000569278 FAM163AQ96GL9 167 aaPredicted RBP13.86□□□□□ -0.19
CHRFAM7A-206ENST00000569278 MROH7-TTC4A0A0A0MT08 1334 aa13.86□□□□□ -0.19
CHRFAM7A-206ENST00000569278 COL2A1P02458 1487 aaPredicted RBP13.86□□□□□ -0.19
CHRFAM7A-206ENST00000569278 FOCADQ5VW36 1801 aa13.85□□□□□ -0.19
CHRFAM7A-206ENST00000569278 UBTFL1P0CB47 393 aaPredicted RBP13.85□□□□□ -0.19
CHRFAM7A-206ENST00000569278 IL15P40933 162 aaPredicted RBP13.85□□□□□ -0.19
CHRFAM7A-206ENST00000569278 BTDP43251 543 aa13.85□□□□□ -0.19
CHRFAM7A-206ENST00000569278 FLT3LGP49771 235 aa13.85□□□□□ -0.19
CHRFAM7A-206ENST00000569278 FCGRTP55899 365 aa13.85□□□□□ -0.19
CHRFAM7A-206ENST00000569278 SLAIN1Q8ND83 568 aa13.85□□□□□ -0.19
CHRFAM7A-206ENST00000569278 RNF208Q9H0X6 261 aa13.85□□□□□ -0.19
CHRFAM7A-206ENST00000569278 CEP126Q9P2H0 1117 aa13.85□□□□□ -0.19
CHRFAM7A-206ENST00000569278 SLC45A1Q9Y2W3 748 aa13.85□□□□□ -0.19
CHRFAM7A-206ENST00000569278 ZBTB7BO15156 539 aaPredicted RBP13.84□□□□□ -0.19
CHRFAM7A-206ENST00000569278 FARP2O94887 1054 aaPredicted RBP13.84□□□□□ -0.19
CHRFAM7A-206ENST00000569278 INHAP05111 366 aa13.84□□□□□ -0.19
CHRFAM7A-206ENST00000569278 TIMM10P62072 90 aa13.84□□□□□ -0.19
CHRFAM7A-206ENST00000569278 PAK6Q9NQU5 681 aaPredicted RBP13.84□□□□□ -0.19
CHRFAM7A-206ENST00000569278 RCAN3Q9UKA8 241 aa13.84□□□□□ -0.19
CHRFAM7A-206ENST00000569278 NOB1Q9ULX3 412 aaKnown RBP13.84□□□□□ -0.19
CHRFAM7A-206ENST00000569278 MYO5AQ9Y4I1 1855 aaKnown RBP13.84□□□□□ -0.19
CHRFAM7A-206ENST00000569278 GPR75-ASB3A0A0A6YYF3 556 aa13.83□□□□□ -0.2
CHRFAM7A-206ENST00000569278 A0A1B0GUL7 405 aa13.83□□□□□ -0.2
CHRFAM7A-206ENST00000569278 TRIM75PA6NK02 468 aa13.83□□□□□ -0.2
CHRFAM7A-206ENST00000569278 SOX1O00570 391 aaPredicted RBP13.83□□□□□ -0.2
CHRFAM7A-206ENST00000569278 ADCY3O60266 1144 aa13.83□□□□□ -0.2
CHRFAM7A-206ENST00000569278 HOXD10P28358 340 aa13.83□□□□□ -0.2
CHRFAM7A-206ENST00000569278 MECOMQ03112 1051 aa13.83□□□□□ -0.2
CHRFAM7A-206ENST00000569278 PICALMQ13492 652 aa13.83□□□□□ -0.2
CHRFAM7A-206ENST00000569278 IRF5Q13568 498 aa13.83□□□□□ -0.2
CHRFAM7A-206ENST00000569278 GADL1Q6ZQY3 521 aa13.83□□□□□ -0.2
CHRFAM7A-206ENST00000569278 NKX2-3Q8TAU0 364 aa13.83□□□□□ -0.2
CHRFAM7A-206ENST00000569278 DIS3LQ8TF46 1054 aaKnown RBP13.83□□□□□ -0.2
CHRFAM7A-206ENST00000569278 XAGE2Q96GT9 111 aa13.83□□□□□ -0.2
CHRFAM7A-206ENST00000569278 CRISPLD2Q9H0B8 497 aa13.83□□□□□ -0.2
CHRFAM7A-206ENST00000569278 GNL3LQ9NVN8 582 aaKnown RBP13.83□□□□□ -0.2
CHRFAM7A-206ENST00000569278 AGTPBP1Q9UPW5 1226 aa13.83□□□□□ -0.2
CHRFAM7A-206ENST00000569278 TNNQ9UQP3 1299 aa13.83□□□□□ -0.2
CHRFAM7A-206ENST00000569278 STK24Q9Y6E0 443 aa13.83□□□□□ -0.2
CHRFAM7A-206ENST00000569278 DDX60LQ5H9U9 1706 aaKnown RBP13.83□□□□□ -0.2
CHRFAM7A-206ENST00000569278 CTNND1O60716 968 aaKnown RBP13.82□□□□□ -0.2
CHRFAM7A-206ENST00000569278 SGPL1O95470 568 aa13.82□□□□□ -0.2
CHRFAM7A-206ENST00000569278 TFCP2Q12800 502 aa13.82□□□□□ -0.2
CHRFAM7A-206ENST00000569278 MTX1Q13505 466 aa13.82□□□□□ -0.2
CHRFAM7A-206ENST00000569278 FASTKD5Q7L8L6 764 aaKnown RBP13.82□□□□□ -0.2
CHRFAM7A-206ENST00000569278 DZIP1Q86YF9 867 aaKnown RBP13.82□□□□□ -0.2
CHRFAM7A-206ENST00000569278 ANKRD13CQ8N6S4 541 aa13.82□□□□□ -0.2
CHRFAM7A-206ENST00000569278 DPF3Q92784 378 aa13.82□□□□□ -0.2
CHRFAM7A-206ENST00000569278 PICK1Q9NRD5 415 aa13.82□□□□□ -0.2
CHRFAM7A-206ENST00000569278 HMG20BQ9P0W2 317 aa13.82□□□□□ -0.2
CHRFAM7A-206ENST00000569278 VCANP13611 3396 aa13.81□□□□□ -0.2
CHRFAM7A-206ENST00000569278 CDH23Q9H251 3354 aa13.81□□□□□ -0.2
CHRFAM7A-206ENST00000569278 JAG1P78504 1218 aa13.81□□□□□ -0.2
CHRFAM7A-206ENST00000569278 SHROOM1Q2M3G4 852 aaPredicted RBP13.81□□□□□ -0.2
CHRFAM7A-206ENST00000569278 HS6ST3Q8IZP7 471 aa13.81□□□□□ -0.2
CHRFAM7A-206ENST00000569278 PXYLP1Q8TE99 480 aa13.81□□□□□ -0.2
CHRFAM7A-206ENST00000569278 NSUN4Q96CB9 384 aaKnown RBP13.81□□□□□ -0.2
CHRFAM7A-206ENST00000569278 DNAJC18Q9H819 358 aa13.81□□□□□ -0.2
CHRFAM7A-206ENST00000569278 ABCF2Q9UG63 623 aa13.81□□□□□ -0.2
CHRFAM7A-206ENST00000569278 TNPO2O14787 897 aaKnown RBP13.8□□□□□ -0.2
CHRFAM7A-206ENST00000569278 TBC1D12O60347 775 aa13.8□□□□□ -0.2
CHRFAM7A-206ENST00000569278 PEX10O60683 326 aa13.8□□□□□ -0.2
CHRFAM7A-206ENST00000569278 CT47B1P0C2W7 299 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms