RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 MYO5AQ9Y4I1 1855 aaKnown RBP19.16■□□□□ 0.66
USB1-215ENST00000569252 NPM3O75607 178 aaKnown RBP19.15■□□□□ 0.66
USB1-215ENST00000569252 POLR3DP05423 398 aaPredicted RBP19.15■□□□□ 0.66
USB1-215ENST00000569252 FKBP1BP68106 108 aa19.15■□□□□ 0.66
USB1-215ENST00000569252 RASA3Q14644 834 aa19.15■□□□□ 0.66
USB1-215ENST00000569252 CCDC129Q6ZRS4 1044 aa19.15■□□□□ 0.66
USB1-215ENST00000569252 MAPKAPK5Q8IW41 473 aa19.15■□□□□ 0.66
USB1-215ENST00000569252 FAM151AQ8WW52 585 aa19.15■□□□□ 0.66
USB1-215ENST00000569252 CCDC171Q6TFL3 1326 aa19.15■□□□□ 0.66
USB1-215ENST00000569252 AK9Q5TCS8 1911 aa19.15■□□□□ 0.66
USB1-215ENST00000569252 SSC5DA1L4H1 1573 aa19.15■□□□□ 0.66
USB1-215ENST00000569252 WDHD1O75717 1129 aaPredicted RBP19.14■□□□□ 0.65
USB1-215ENST00000569252 NF2P35240 595 aa19.14■□□□□ 0.65
USB1-215ENST00000569252 TDO2P48775 406 aa19.14■□□□□ 0.65
USB1-215ENST00000569252 SUPT20HL1Q3ZLR7 823 aa19.14■□□□□ 0.65
USB1-215ENST00000569252 GIMAP6Q6P9H5 292 aa19.14■□□□□ 0.65
USB1-215ENST00000569252 SDR42E1Q8WUS8 393 aa19.14■□□□□ 0.65
USB1-215ENST00000569252 CLMNQ96JQ2 1002 aa19.14■□□□□ 0.65
USB1-215ENST00000569252 TRIM34Q9BYJ4 488 aa19.14■□□□□ 0.65
USB1-215ENST00000569252 DHX36Q9H2U1 1008 aaKnown RBP19.14■□□□□ 0.65
USB1-215ENST00000569252 RPAP1Q9BWH6 1393 aaPredicted RBP19.14■□□□□ 0.65
USB1-215ENST00000569252 MYH7P12883 1935 aa19.13■□□□□ 0.65
USB1-215ENST00000569252 BRCA2P51587 3418 aa19.13■□□□□ 0.65
USB1-215ENST00000569252 HLA-DOAP06340 250 aa19.13■□□□□ 0.65
USB1-215ENST00000569252 NFIAQ12857 509 aa19.13■□□□□ 0.65
USB1-215ENST00000569252 PRPF38BQ5VTL8 546 aaKnown RBP19.13■□□□□ 0.65
USB1-215ENST00000569252 TTC6Q86TZ1 520 aa19.13■□□□□ 0.65
USB1-215ENST00000569252 ESYT1Q9BSJ8 1104 aa19.13■□□□□ 0.65
USB1-215ENST00000569252 NAPBQ9H115 298 aa19.13■□□□□ 0.65
USB1-215ENST00000569252 MCM9Q9NXL9 1143 aa19.13■□□□□ 0.65
USB1-215ENST00000569252 ANGEL1Q9UNK9 670 aaKnown RBP19.13■□□□□ 0.65
USB1-215ENST00000569252 FLT1P17948 1338 aa19.12■□□□□ 0.65
USB1-215ENST00000569252 SGSM2O43147 1006 aa19.12■□□□□ 0.65
USB1-215ENST00000569252 PRKAB2O43741 272 aa19.12■□□□□ 0.65
USB1-215ENST00000569252 TM4SF4P48230 202 aa19.12■□□□□ 0.65
USB1-215ENST00000569252 OSBPL5Q9H0X9 879 aaPredicted RBP19.12■□□□□ 0.65
USB1-215ENST00000569252 FAM198AQ9UFP1 575 aa19.12■□□□□ 0.65
USB1-215ENST00000569252 CTNNA3Q9UI47 895 aa19.12■□□□□ 0.65
USB1-215ENST00000569252 REC8O95072 547 aa19.11■□□□□ 0.65
USB1-215ENST00000569252 HSPD1P10809 573 aaKnown RBP19.11■□□□□ 0.65
USB1-215ENST00000569252 CAP1Q01518 475 aa19.11■□□□□ 0.65
USB1-215ENST00000569252 ZNF589Q86UQ0 364 aaPredicted RBP19.11■□□□□ 0.65
USB1-215ENST00000569252 IFNL3Q8IZI9 196 aa19.11■□□□□ 0.65
USB1-215ENST00000569252 TMEM39BQ9GZU3 492 aa19.11■□□□□ 0.65
USB1-215ENST00000569252 DCP1AQ9NPI6 582 aaPredicted RBP19.11■□□□□ 0.65
USB1-215ENST00000569252 SAP30BPQ9UHR5 308 aaKnown RBP19.11■□□□□ 0.65
USB1-215ENST00000569252 GSG1L2A8MUP6 293 aa19.1■□□□□ 0.65
USB1-215ENST00000569252 SLC3A2P08195 630 aaKnown RBP19.1■□□□□ 0.65
USB1-215ENST00000569252 ANO2Q9NQ90 1003 aa19.1■□□□□ 0.65
USB1-215ENST00000569252 DDX4Q9NQI0 724 aaKnown RBP19.1■□□□□ 0.65
USB1-215ENST00000569252 PI4KBQ9UBF8 816 aa19.1■□□□□ 0.65
USB1-215ENST00000569252 POTEFA5A3E0 1075 aa19.09■□□□□ 0.65
USB1-215ENST00000569252 MINDY4BA8MYZ0 360 aa19.09■□□□□ 0.65
USB1-215ENST00000569252 SPRYD7Q5W111 196 aa19.09■□□□□ 0.65
USB1-215ENST00000569252 DCAF15Q66K64 600 aa19.09■□□□□ 0.65
USB1-215ENST00000569252 REM2Q8IYK8 340 aaPredicted RBP19.09■□□□□ 0.65
USB1-215ENST00000569252 CRACR2BQ8N4Y2 399 aaPredicted RBP19.09■□□□□ 0.65
USB1-215ENST00000569252 DSCC1Q9BVC3 393 aa19.09■□□□□ 0.65
USB1-215ENST00000569252 ARPP21Q9UBL0 812 aaPredicted RBP19.09■□□□□ 0.65
USB1-215ENST00000569252 PALD1Q9ULE6 856 aa19.09■□□□□ 0.65
USB1-215ENST00000569252 USP17L12C9JPN9 530 aa19.08■□□□□ 0.64
USB1-215ENST00000569252 USP17L21D6R901 530 aa19.08■□□□□ 0.64
USB1-215ENST00000569252 IGF2BP3O00425 579 aaKnown RBP eCLIP19.08■□□□□ 0.64
USB1-215ENST00000569252 PPP1R12BO60237 982 aaPredicted RBP19.08■□□□□ 0.64
USB1-215ENST00000569252 FKTNO75072 461 aa19.08■□□□□ 0.64
USB1-215ENST00000569252 ALX1Q15699 326 aa19.08■□□□□ 0.64
USB1-215ENST00000569252 LDLRAD1Q5T700 205 aa19.08■□□□□ 0.64
USB1-215ENST00000569252 FBXO46Q6PJ61 603 aaPredicted RBP19.08■□□□□ 0.64
USB1-215ENST00000569252 ARMC9Q7Z3E5 817 aa19.08■□□□□ 0.64
USB1-215ENST00000569252 FOXP4Q8IVH2 680 aaPredicted RBP19.08■□□□□ 0.64
USB1-215ENST00000569252 ZFPM1Q8IX07 1006 aa19.08■□□□□ 0.64
USB1-215ENST00000569252 ZNF213O14771 459 aa19.07■□□□□ 0.64
USB1-215ENST00000569252 FGAP02671 866 aa19.07■□□□□ 0.64
USB1-215ENST00000569252 GJA5P36382 358 aa19.07■□□□□ 0.64
USB1-215ENST00000569252 VPS53Q5VIR6 699 aa19.07■□□□□ 0.64
USB1-215ENST00000569252 CDAN1Q8IWY9 1227 aa19.07■□□□□ 0.64
USB1-215ENST00000569252 ZNF287Q9HBT7 754 aa19.07■□□□□ 0.64
USB1-215ENST00000569252 TRIM17Q9Y577 477 aa19.07■□□□□ 0.64
USB1-215ENST00000569252 U3KPZ7 1027 aaPredicted RBP19.07■□□□□ 0.64
USB1-215ENST00000569252 IMMTQ16891 758 aaKnown RBP19.06■□□□□ 0.64
USB1-215ENST00000569252 SLC4A8Q2Y0W8 1093 aa19.06■□□□□ 0.64
USB1-215ENST00000569252 SBK1Q52WX2 424 aa19.06■□□□□ 0.64
USB1-215ENST00000569252 NBPF12Q5TAG4 269 aaPredicted RBP19.06■□□□□ 0.64
USB1-215ENST00000569252 CTR9Q6PD62 1173 aa19.06■□□□□ 0.64
USB1-215ENST00000569252 DDTLA6NHG4 134 aaPredicted RBP19.05■□□□□ 0.64
USB1-215ENST00000569252 SREBF2Q12772 1141 aa19.05■□□□□ 0.64
USB1-215ENST00000569252 PKN2Q16513 984 aaKnown RBP19.05■□□□□ 0.64
USB1-215ENST00000569252 WNK4Q96J92 1243 aa19.05■□□□□ 0.64
USB1-215ENST00000569252 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.05■□□□□ 0.64
USB1-215ENST00000569252 HERC5Q9UII4 1024 aaKnown RBP19.05■□□□□ 0.64
USB1-215ENST00000569252 SERPINB13Q9UIV8 391 aa19.05■□□□□ 0.64
USB1-215ENST00000569252 TAOK2Q9UL54 1235 aa19.05■□□□□ 0.64
USB1-215ENST00000569252 ECM29Q5VYK3 1845 aa19.04■□□□□ 0.64
USB1-215ENST00000569252 OTOFQ9HC10 1997 aa19.04■□□□□ 0.64
USB1-215ENST00000569252 KIAA0100Q14667 2235 aaKnown RBP19.04■□□□□ 0.64
USB1-215ENST00000569252 PDE4BQ07343 736 aa19.04■□□□□ 0.64
USB1-215ENST00000569252 C12orf60Q5U649 245 aa19.04■□□□□ 0.64
USB1-215ENST00000569252 RNF20Q5VTR2 975 aa19.04■□□□□ 0.64
USB1-215ENST00000569252 MIGA2Q7L4E1 593 aa19.04■□□□□ 0.64
USB1-215ENST00000569252 IFNL1Q8IU54 200 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms