RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 RAB11FIP3O75154 756 aa9.55□□□□□ -0.88
CDH3-209ENST00000569080 IDH1O75874 414 aaKnown RBP9.55□□□□□ -0.88
CDH3-209ENST00000569080 BAG3O95817 575 aa9.55□□□□□ -0.88
CDH3-209ENST00000569080 PLCG2P16885 1265 aa9.55□□□□□ -0.88
CDH3-209ENST00000569080 CYP7A1P22680 504 aa9.55□□□□□ -0.88
CDH3-209ENST00000569080 DYNLL1P63167 89 aaKnown RBP9.55□□□□□ -0.88
CDH3-209ENST00000569080 MAPKAPK5Q8IW41 473 aa9.55□□□□□ -0.88
CDH3-209ENST00000569080 CLASRPQ8N2M8 674 aaKnown RBP9.55□□□□□ -0.88
CDH3-209ENST00000569080 MAGEB6Q8N7X4 407 aa9.55□□□□□ -0.88
CDH3-209ENST00000569080 TGFBRAP1Q8WUH2 860 aa9.55□□□□□ -0.88
CDH3-209ENST00000569080 ERO1AQ96HE7 468 aa9.55□□□□□ -0.88
CDH3-209ENST00000569080 RIOK1Q9BRS2 568 aaKnown RBP9.55□□□□□ -0.88
CDH3-209ENST00000569080 ZFYVE28Q9HCC9 887 aa9.55□□□□□ -0.88
CDH3-209ENST00000569080 ZHX2Q9Y6X8 837 aa9.55□□□□□ -0.88
CDH3-209ENST00000569080 MGAMO43451 1857 aa9.54□□□□□ -0.88
CDH3-209ENST00000569080 TCRBV5S4A2TA0A5A2 114 aa9.54□□□□□ -0.88
CDH3-209ENST00000569080 APBB1O00213 710 aa9.54□□□□□ -0.88
CDH3-209ENST00000569080 PDHXO00330 501 aa9.54□□□□□ -0.88
CDH3-209ENST00000569080 CTGFP29279 349 aa9.54□□□□□ -0.88
CDH3-209ENST00000569080 SOX10P56693 466 aa9.54□□□□□ -0.88
CDH3-209ENST00000569080 JAG1P78504 1218 aa9.54□□□□□ -0.88
CDH3-209ENST00000569080 SHROOM1Q2M3G4 852 aaPredicted RBP9.54□□□□□ -0.88
CDH3-209ENST00000569080 TMED8Q6PL24 325 aaPredicted RBP9.54□□□□□ -0.88
CDH3-209ENST00000569080 C17orf99Q6UX52 265 aa9.54□□□□□ -0.88
CDH3-209ENST00000569080 MIGA1Q8NAN2 632 aa9.54□□□□□ -0.88
CDH3-209ENST00000569080 EDC3Q96F86 508 aaKnown RBP9.54□□□□□ -0.88
CDH3-209ENST00000569080 ARHGAP39Q9C0H5 1083 aa9.54□□□□□ -0.88
CDH3-209ENST00000569080 DHX36Q9H2U1 1008 aaKnown RBP9.54□□□□□ -0.88
CDH3-209ENST00000569080 CHMP4BQ9H444 224 aaKnown RBP9.54□□□□□ -0.88
CDH3-209ENST00000569080 PICK1Q9NRD5 415 aa9.54□□□□□ -0.88
CDH3-209ENST00000569080 HERC5Q9UII4 1024 aaKnown RBP9.54□□□□□ -0.88
CDH3-209ENST00000569080 PTPN22Q9Y2R2 807 aa9.54□□□□□ -0.88
CDH3-209ENST00000569080 BCRP11274 1271 aa9.53□□□□□ -0.88
CDH3-209ENST00000569080 PDE6AP16499 860 aa9.53□□□□□ -0.88
CDH3-209ENST00000569080 CAP2P40123 477 aa9.53□□□□□ -0.88
CDH3-209ENST00000569080 LACTBP83111 547 aaPredicted RBP9.53□□□□□ -0.88
CDH3-209ENST00000569080 MAP3K12Q12852 859 aa9.53□□□□□ -0.88
CDH3-209ENST00000569080 ARMC5Q96C12 935 aa9.53□□□□□ -0.88
CDH3-209ENST00000569080 NOL10Q9BSC4 688 aaKnown RBP9.53□□□□□ -0.88
CDH3-209ENST00000569080 EFCC1Q9HA90 598 aa9.53□□□□□ -0.88
CDH3-209ENST00000569080 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.53□□□□□ -0.88
CDH3-209ENST00000569080 PI4KBQ9UBF8 816 aa9.53□□□□□ -0.88
CDH3-209ENST00000569080 PALD1Q9ULE6 856 aa9.53□□□□□ -0.88
CDH3-209ENST00000569080 TRIM75PA6NK02 468 aa9.52□□□□□ -0.89
CDH3-209ENST00000569080 GOLIM4O00461 696 aa9.52□□□□□ -0.89
CDH3-209ENST00000569080 IFIT2P09913 472 aaKnown RBP9.52□□□□□ -0.89
CDH3-209ENST00000569080 CYP2C8P10632 490 aa9.52□□□□□ -0.89
CDH3-209ENST00000569080 ATP5JP18859 108 aa9.52□□□□□ -0.89
CDH3-209ENST00000569080 RRP1P56182 461 aaKnown RBP9.52□□□□□ -0.89
CDH3-209ENST00000569080 TTF1Q15361 905 aaPredicted RBP9.52□□□□□ -0.89
CDH3-209ENST00000569080 CERS3Q8IU89 383 aa9.52□□□□□ -0.89
CDH3-209ENST00000569080 PARK7Q99497 189 aaKnown RBP9.52□□□□□ -0.89
CDH3-209ENST00000569080 CPA4Q9UI42 421 aa9.52□□□□□ -0.89
CDH3-209ENST00000569080 SLC45A1Q9Y2W3 748 aa9.52□□□□□ -0.89
CDH3-209ENST00000569080 SMARCA5O60264 1052 aaPredicted RBP9.51□□□□□ -0.89
CDH3-209ENST00000569080 CHGBP05060 677 aa9.51□□□□□ -0.89
CDH3-209ENST00000569080 MLLT1Q03111 559 aaPredicted RBP9.51□□□□□ -0.89
CDH3-209ENST00000569080 EVX2Q03828 476 aa9.51□□□□□ -0.89
CDH3-209ENST00000569080 SLFNL1Q499Z3 407 aa9.51□□□□□ -0.89
CDH3-209ENST00000569080 SH3D19Q5HYK7 790 aa9.51□□□□□ -0.89
CDH3-209ENST00000569080 TREML2Q5T2D2 321 aa9.51□□□□□ -0.89
CDH3-209ENST00000569080 FASTKD5Q7L8L6 764 aaKnown RBP9.51□□□□□ -0.89
CDH3-209ENST00000569080 TRIM47Q96LD4 638 aa9.51□□□□□ -0.89
CDH3-209ENST00000569080 DNAJC2Q99543 621 aaKnown RBP9.51□□□□□ -0.89
CDH3-209ENST00000569080 HAUS7Q99871 368 aa9.51□□□□□ -0.89
CDH3-209ENST00000569080 LRRCC1Q9C099 1032 aa9.51□□□□□ -0.89
CDH3-209ENST00000569080 EHD4Q9H223 541 aa9.51□□□□□ -0.89
CDH3-209ENST00000569080 DCTPP1Q9H773 170 aa9.51□□□□□ -0.89
CDH3-209ENST00000569080 PAG1Q9NWQ8 432 aa9.51□□□□□ -0.89
CDH3-209ENST00000569080 SAP30BPQ9UHR5 308 aaKnown RBP9.51□□□□□ -0.89
CDH3-209ENST00000569080 AGTPBP1Q9UPW5 1226 aa9.51□□□□□ -0.89
CDH3-209ENST00000569080 PCDHB15Q9Y5E8 787 aa9.51□□□□□ -0.89
CDH3-209ENST00000569080 PTCH2Q9Y6C5 1203 aa9.51□□□□□ -0.89
CDH3-209ENST00000569080 ZNF532Q9HCE3 1301 aa9.51□□□□□ -0.89
CDH3-209ENST00000569080 BAZ2AQ9UIF9 1905 aaKnown RBP9.5□□□□□ -0.89
CDH3-209ENST00000569080 PDE4DIPQ5VU43 2346 aa9.5□□□□□ -0.89
CDH3-209ENST00000569080 KIAA0100Q14667 2235 aaKnown RBP9.5□□□□□ -0.89
CDH3-209ENST00000569080 ADD2P35612 726 aa9.5□□□□□ -0.89
CDH3-209ENST00000569080 GABPAQ06546 454 aa9.5□□□□□ -0.89
CDH3-209ENST00000569080 SPP2Q13103 211 aa9.5□□□□□ -0.89
CDH3-209ENST00000569080 SLC4A8Q2Y0W8 1093 aa9.5□□□□□ -0.89
CDH3-209ENST00000569080 SLC9C2Q5TAH2 1124 aa9.5□□□□□ -0.89
CDH3-209ENST00000569080 TATDN1Q6P1N9 297 aa9.5□□□□□ -0.89
CDH3-209ENST00000569080 GADL1Q6ZQY3 521 aa9.5□□□□□ -0.89
CDH3-209ENST00000569080 FOXP4Q8IVH2 680 aaPredicted RBP9.5□□□□□ -0.89
CDH3-209ENST00000569080 LCORLQ8N3X6 602 aa9.5□□□□□ -0.89
CDH3-209ENST00000569080 PROCA1Q8NCQ7 364 aaPredicted RBP9.5□□□□□ -0.89
CDH3-209ENST00000569080 ZNF280CQ8ND82 737 aa9.5□□□□□ -0.89
CDH3-209ENST00000569080 ZNF333Q96JL9 665 aa9.5□□□□□ -0.89
CDH3-209ENST00000569080 WDR18Q9BV38 432 aa9.5□□□□□ -0.89
CDH3-209ENST00000569080 TBC1D2Q9BYX2 928 aa9.5□□□□□ -0.89
CDH3-209ENST00000569080 BOLA2Q9H3K6 86 aa9.5□□□□□ -0.89
CDH3-209ENST00000569080 ZBTB21Q9ULJ3 1066 aa9.5□□□□□ -0.89
CDH3-209ENST00000569080 MYH8P13535 1937 aa9.49□□□□□ -0.89
CDH3-209ENST00000569080 MAGEB6P1A0A0J9YX57 407 aa9.49□□□□□ -0.89
CDH3-209ENST00000569080 POTEFA5A3E0 1075 aa9.49□□□□□ -0.89
CDH3-209ENST00000569080 USP17L5A8MUK1 530 aa9.49□□□□□ -0.89
CDH3-209ENST00000569080 GDF11O95390 407 aa9.49□□□□□ -0.89
CDH3-209ENST00000569080 HLA-DOAP06340 250 aa9.49□□□□□ -0.89
CDH3-209ENST00000569080 ASNSP08243 561 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms