RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 MROH7-TTC4A0A0A0MT08 1334 aa15.5■□□□□ 0.07
SNX29-207ENST00000568949 IL15P40933 162 aaPredicted RBP15.5■□□□□ 0.07
SNX29-207ENST00000568949 BTDP43251 543 aa15.5■□□□□ 0.07
SNX29-207ENST00000568949 RHBDL3P58872 404 aa15.5■□□□□ 0.07
SNX29-207ENST00000568949 PICALMQ13492 652 aa15.5■□□□□ 0.07
SNX29-207ENST00000568949 CCDC102BQ68D86 513 aa15.5■□□□□ 0.07
SNX29-207ENST00000568949 Q7L0L9 218 aa15.5■□□□□ 0.07
SNX29-207ENST00000568949 ZNF280CQ8ND82 737 aa15.5■□□□□ 0.07
SNX29-207ENST00000568949 SIL1Q9H173 461 aa15.5■□□□□ 0.07
SNX29-207ENST00000568949 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.5■□□□□ 0.07
SNX29-207ENST00000568949 A0A0C4DFX4 3053 aa15.49■□□□□ 0.07
SNX29-207ENST00000568949 GPR75-ASB3A0A0A6YYF3 556 aa15.49■□□□□ 0.07
SNX29-207ENST00000568949 MAP4K4O95819 1239 aaPredicted RBP15.49■□□□□ 0.07
SNX29-207ENST00000568949 SYN1P17600 705 aa15.49■□□□□ 0.07
SNX29-207ENST00000568949 TRIM32Q13049 653 aa15.49■□□□□ 0.07
SNX29-207ENST00000568949 RASGRF1Q13972 1273 aa15.49■□□□□ 0.07
SNX29-207ENST00000568949 SH3D19Q5HYK7 790 aa15.49■□□□□ 0.07
SNX29-207ENST00000568949 MAP3K21Q5TCX8 1036 aa15.49■□□□□ 0.07
SNX29-207ENST00000568949 ASCC2Q9H1I8 757 aaPredicted RBP15.49■□□□□ 0.07
SNX29-207ENST00000568949 MORF4L1Q9UBU8 362 aa15.49■□□□□ 0.07
SNX29-207ENST00000568949 ABCF2Q9UG63 623 aa15.49■□□□□ 0.07
SNX29-207ENST00000568949 ZNF521Q96K83 1311 aa15.48■□□□□ 0.07
SNX29-207ENST00000568949 PLXNB2O15031 1838 aa15.48■□□□□ 0.07
SNX29-207ENST00000568949 COL2A1P02458 1487 aaPredicted RBP15.48■□□□□ 0.07
SNX29-207ENST00000568949 UBTFL1P0CB47 393 aaPredicted RBP15.48■□□□□ 0.07
SNX29-207ENST00000568949 XRCC5P13010 732 aaKnown RBP15.48■□□□□ 0.07
SNX29-207ENST00000568949 ADORA1P30542 326 aa15.48■□□□□ 0.07
SNX29-207ENST00000568949 CAP2P40123 477 aa15.48■□□□□ 0.07
SNX29-207ENST00000568949 HMGCS2P54868 508 aa15.48■□□□□ 0.07
SNX29-207ENST00000568949 SSH1Q8WYL5 1049 aa15.48■□□□□ 0.07
SNX29-207ENST00000568949 TRIB2Q92519 343 aa15.48■□□□□ 0.07
SNX29-207ENST00000568949 UBE2OQ9C0C9 1292 aaKnown RBP15.48■□□□□ 0.07
SNX29-207ENST00000568949 USP17L5A8MUK1 530 aa15.47■□□□□ 0.07
SNX29-207ENST00000568949 ERICH6Q7L0X2 663 aa15.47■□□□□ 0.07
SNX29-207ENST00000568949 TRMT44Q8IYL2 757 aaKnown RBP15.47■□□□□ 0.07
SNX29-207ENST00000568949 HDAC5Q9UQL6 1122 aa15.47■□□□□ 0.07
SNX29-207ENST00000568949 ATAD5Q96QE3 1844 aa15.47■□□□□ 0.07
SNX29-207ENST00000568949 PFASO15067 1338 aa15.46■□□□□ 0.07
SNX29-207ENST00000568949 FAM196BA6NMK8 535 aa15.46■□□□□ 0.07
SNX29-207ENST00000568949 COL6A1P12109 1028 aa15.46■□□□□ 0.07
SNX29-207ENST00000568949 MECOMQ03112 1051 aa15.46■□□□□ 0.07
SNX29-207ENST00000568949 SOCS4Q8WXH5 440 aa15.46■□□□□ 0.07
SNX29-207ENST00000568949 NUDT12Q9BQG2 462 aa15.46■□□□□ 0.07
SNX29-207ENST00000568949 AS3MTQ9HBK9 375 aa15.46■□□□□ 0.07
SNX29-207ENST00000568949 COPRSQ9NQ92 184 aa15.46■□□□□ 0.07
SNX29-207ENST00000568949 LDHCP07864 332 aa15.45■□□□□ 0.06
SNX29-207ENST00000568949 PRKAR2AP13861 404 aaKnown RBP15.45■□□□□ 0.06
SNX29-207ENST00000568949 CYP2B6P20813 491 aa15.45■□□□□ 0.06
SNX29-207ENST00000568949 HOXA7P31268 230 aaPredicted RBP15.45■□□□□ 0.06
SNX29-207ENST00000568949 IRX3P78415 501 aaPredicted RBP15.45■□□□□ 0.06
SNX29-207ENST00000568949 GSTO1P78417 241 aa15.45■□□□□ 0.06
SNX29-207ENST00000568949 WDR18Q9BV38 432 aa15.45■□□□□ 0.06
SNX29-207ENST00000568949 HERC5Q9UII4 1024 aaKnown RBP15.45■□□□□ 0.06
SNX29-207ENST00000568949 ANP32CO43423 234 aa15.44■□□□□ 0.06
SNX29-207ENST00000568949 TIMM10P62072 90 aa15.44■□□□□ 0.06
SNX29-207ENST00000568949 RRP1BQ14684 758 aaKnown RBP15.44■□□□□ 0.06
SNX29-207ENST00000568949 ALDH1L2Q3SY69 923 aa15.44■□□□□ 0.06
SNX29-207ENST00000568949 FAM109BQ6ICB4 259 aaPredicted RBP15.44■□□□□ 0.06
SNX29-207ENST00000568949 GPRC5AQ8NFJ5 357 aa15.44■□□□□ 0.06
SNX29-207ENST00000568949 ZNF384Q8TF68 577 aa15.44■□□□□ 0.06
SNX29-207ENST00000568949 PA2G4Q9UQ80 394 aaKnown RBP15.44■□□□□ 0.06
SNX29-207ENST00000568949 MAPK4P31152 587 aa15.43■□□□□ 0.06
SNX29-207ENST00000568949 BACE1P56817 501 aa15.43■□□□□ 0.06
SNX29-207ENST00000568949 MVPQ14764 893 aaKnown RBP15.43■□□□□ 0.06
SNX29-207ENST00000568949 XAGE2Q96GT9 111 aa15.43■□□□□ 0.06
SNX29-207ENST00000568949 P2RX7Q99572 595 aaKnown RBP15.43■□□□□ 0.06
SNX29-207ENST00000568949 COL25A1Q9BXS0 654 aaPredicted RBP15.43■□□□□ 0.06
SNX29-207ENST00000568949 TMOD4Q9NZQ9 345 aa15.43■□□□□ 0.06
SNX29-207ENST00000568949 AKAP2Q9Y2D5 859 aa15.43■□□□□ 0.06
SNX29-207ENST00000568949 A0A1B0GUL7 405 aa15.42■□□□□ 0.06
SNX29-207ENST00000568949 C19orf81C9J6K1 198 aa15.42■□□□□ 0.06
SNX29-207ENST00000568949 E9PSI1 815 aa15.42■□□□□ 0.06
SNX29-207ENST00000568949 POTEB2H3BUK9 544 aa15.42■□□□□ 0.06
SNX29-207ENST00000568949 ZKSCAN1P17029 563 aaPredicted RBP15.42■□□□□ 0.06
SNX29-207ENST00000568949 HERVK_113P62684 666 aa15.42■□□□□ 0.06
SNX29-207ENST00000568949 CACNB2Q08289 660 aaPredicted RBP15.42■□□□□ 0.06
SNX29-207ENST00000568949 PDE3AQ14432 1141 aa15.42■□□□□ 0.06
SNX29-207ENST00000568949 LHX8Q68G74 356 aa15.42■□□□□ 0.06
SNX29-207ENST00000568949 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.42■□□□□ 0.06
SNX29-207ENST00000568949 FAM9BQ8IZU0 186 aa15.42■□□□□ 0.06
SNX29-207ENST00000568949 USP6NLQ92738 828 aa15.42■□□□□ 0.06
SNX29-207ENST00000568949 NSUN4Q96CB9 384 aaKnown RBP15.42■□□□□ 0.06
SNX29-207ENST00000568949 DHX36Q9H2U1 1008 aaKnown RBP15.42■□□□□ 0.06
SNX29-207ENST00000568949 TXNRD2Q9NNW7 524 aa15.42■□□□□ 0.06
SNX29-207ENST00000568949 PI4KBQ9UBF8 816 aa15.42■□□□□ 0.06
SNX29-207ENST00000568949 ASNSP08243 561 aa15.41■□□□□ 0.06
SNX29-207ENST00000568949 RGS2P41220 211 aa15.41■□□□□ 0.06
SNX29-207ENST00000568949 MTMR2Q13614 643 aa15.41■□□□□ 0.06
SNX29-207ENST00000568949 LRRC26Q2I0M4 334 aa15.41■□□□□ 0.06
SNX29-207ENST00000568949 GTF3C2Q8WUA4 911 aaPredicted RBP15.41■□□□□ 0.06
SNX29-207ENST00000568949 GINM1Q9NU53 330 aa15.41■□□□□ 0.06
SNX29-207ENST00000568949 HMG20BQ9P0W2 317 aa15.41■□□□□ 0.06
SNX29-207ENST00000568949 MDM2Q00987 491 aaPredicted RBP15.4■□□□□ 0.06
SNX29-207ENST00000568949 TEX11Q8IYF3 940 aa15.4■□□□□ 0.06
SNX29-207ENST00000568949 SPATA5Q8NB90 893 aa15.4■□□□□ 0.06
SNX29-207ENST00000568949 RBPJLQ9UBG7 517 aa15.4■□□□□ 0.06
SNX29-207ENST00000568949 CCND3P30281 292 aaPredicted RBP15.39■□□□□ 0.05
SNX29-207ENST00000568949 ERVK-9P63128 1117 aa15.39■□□□□ 0.05
SNX29-207ENST00000568949 ERVK-24P63145 666 aa15.39■□□□□ 0.05
SNX29-207ENST00000568949 TFCP2Q12800 502 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms