RNA–Protein interactions for RNA: ENST00000568900.5

SPNS1-212, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 2

Gene SPNS1, Length 2,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-212ENST00000568900 TMTC2Q8N394 836 aa24.41■■□□□ 1.5
SPNS1-212ENST00000568900 PDE4BQ07343 736 aa24.41■■□□□ 1.5
SPNS1-212ENST00000568900 PODNQ7Z5L7 613 aa24.41■■□□□ 1.5
SPNS1-212ENST00000568900 TMEM87AQ8NBN3 555 aa24.41■■□□□ 1.5
SPNS1-212ENST00000568900 ZSCAN10Q96SZ4 725 aaPredicted RBP24.41■■□□□ 1.5
SPNS1-212ENST00000568900 TTF2Q9UNY4 1162 aaKnown RBP24.41■■□□□ 1.5
SPNS1-212ENST00000568900 DAGLAQ9Y4D2 1042 aa24.41■■□□□ 1.5
SPNS1-212ENST00000568900 GUCY1B3Q02153 619 aa24.4■■□□□ 1.5
SPNS1-212ENST00000568900 SEC23AQ15436 765 aa24.4■■□□□ 1.5
SPNS1-212ENST00000568900 AMOTL1Q8IY63 956 aa24.4■■□□□ 1.5
SPNS1-212ENST00000568900 KCNQ5Q9NR82 932 aa24.4■■□□□ 1.5
SPNS1-212ENST00000568900 SAP30BPQ9UHR5 308 aaKnown RBP24.4■■□□□ 1.5
SPNS1-212ENST00000568900 C21orf2O43822 256 aa24.4■■□□□ 1.5
SPNS1-212ENST00000568900 GADD45BO75293 160 aaPredicted RBP24.4■■□□□ 1.5
SPNS1-212ENST00000568900 RHBDL3P58872 404 aa24.4■■□□□ 1.5
SPNS1-212ENST00000568900 RESTQ13127 1097 aa24.4■■□□□ 1.5
SPNS1-212ENST00000568900 CAVIN1Q6NZI2 390 aaKnown RBP24.4■■□□□ 1.5
SPNS1-212ENST00000568900 CPLX2Q6PUV4 134 aaKnown RBP24.4■■□□□ 1.5
SPNS1-212ENST00000568900 IQCA1Q86XH1 822 aa24.4■■□□□ 1.5
SPNS1-212ENST00000568900 CCDC125Q86Z20 511 aa24.4■■□□□ 1.5
SPNS1-212ENST00000568900 ENAHQ8N8S7 591 aaPredicted RBP24.4■■□□□ 1.5
SPNS1-212ENST00000568900 CDKL5O76039 1030 aa24.39■■□□□ 1.5
SPNS1-212ENST00000568900 FAM217BQ9NTX9 383 aaPredicted RBP24.39■■□□□ 1.5
SPNS1-212ENST00000568900 ECE2O60344 883 aa24.38■■□□□ 1.49
SPNS1-212ENST00000568900 FAM47AQ5JRC9 791 aa24.38■■□□□ 1.49
SPNS1-212ENST00000568900 SNED1Q8TER0 1413 aa24.38■■□□□ 1.49
SPNS1-212ENST00000568900 MBD3O95983 291 aa24.38■■□□□ 1.49
SPNS1-212ENST00000568900 KRT85P78386 507 aa24.38■■□□□ 1.49
SPNS1-212ENST00000568900 AOC3Q16853 763 aa24.38■■□□□ 1.49
SPNS1-212ENST00000568900 CC2D2BQ6DHV5 1058 aa24.38■■□□□ 1.49
SPNS1-212ENST00000568900 ZNF654Q8IZM8 581 aa24.38■■□□□ 1.49
SPNS1-212ENST00000568900 DYNLL2Q96FJ2 89 aa24.38■■□□□ 1.49
SPNS1-212ENST00000568900 SCN9AQ15858 1988 aa24.37■■□□□ 1.49
SPNS1-212ENST00000568900 POLR3DP05423 398 aaPredicted RBP24.37■■□□□ 1.49
SPNS1-212ENST00000568900 TTLL6Q8N841 843 aa24.37■■□□□ 1.49
SPNS1-212ENST00000568900 PHKBQ93100 1093 aa24.37■■□□□ 1.49
SPNS1-212ENST00000568900 ZSCAN16Q9H4T2 348 aaPredicted RBP24.37■■□□□ 1.49
SPNS1-212ENST00000568900 FLT1P17948 1338 aa24.37■■□□□ 1.49
SPNS1-212ENST00000568900 ZBTB7AO95365 584 aa24.37■■□□□ 1.49
SPNS1-212ENST00000568900 SCNN1DP51172 638 aa24.37■■□□□ 1.49
SPNS1-212ENST00000568900 IFIT1BQ5T764 474 aaKnown RBP24.37■■□□□ 1.49
SPNS1-212ENST00000568900 C8orf76Q96K31 380 aa24.37■■□□□ 1.49
SPNS1-212ENST00000568900 NID2Q14112 1375 aa24.37■■□□□ 1.49
SPNS1-212ENST00000568900 ADAMTSL1Q8N6G6 1762 aa24.37■■□□□ 1.49
SPNS1-212ENST00000568900 PLCD1P51178 756 aa24.36■■□□□ 1.49
SPNS1-212ENST00000568900 NTRK3Q16288 839 aa24.36■■□□□ 1.49
SPNS1-212ENST00000568900 RTN1Q16799 776 aa24.36■■□□□ 1.49
SPNS1-212ENST00000568900 CSPP1Q1MSJ5 1256 aa24.36■■□□□ 1.49
SPNS1-212ENST00000568900 NUP133Q8WUM0 1156 aa24.36■■□□□ 1.49
SPNS1-212ENST00000568900 MYH1P12882 1939 aa24.36■■□□□ 1.49
SPNS1-212ENST00000568900 FOCADQ5VW36 1801 aa24.36■■□□□ 1.49
SPNS1-212ENST00000568900 ROBO3Q96MS0 1386 aa24.36■■□□□ 1.49
SPNS1-212ENST00000568900 DDX60LQ5H9U9 1706 aaKnown RBP24.36■■□□□ 1.49
SPNS1-212ENST00000568900 DPEP1P16444 411 aa24.36■■□□□ 1.49
SPNS1-212ENST00000568900 RBM27Q9P2N5 1060 aaKnown RBP24.36■■□□□ 1.49
SPNS1-212ENST00000568900 ECM29Q5VYK3 1845 aa24.35■■□□□ 1.49
SPNS1-212ENST00000568900 TSPY2A6NKD2 308 aa24.35■■□□□ 1.49
SPNS1-212ENST00000568900 TPRNQ4KMQ1 711 aa24.35■■□□□ 1.49
SPNS1-212ENST00000568900 OTUD7BQ6GQQ9 843 aa24.35■■□□□ 1.49
SPNS1-212ENST00000568900 MYH15Q9Y2K3 1946 aa24.35■■□□□ 1.49
SPNS1-212ENST00000568900 NMT2O60551 498 aa24.35■■□□□ 1.49
SPNS1-212ENST00000568900 IARSP41252 1262 aaKnown RBP24.35■■□□□ 1.49
SPNS1-212ENST00000568900 SUPT20HQ8NEM7 779 aa24.35■■□□□ 1.49
SPNS1-212ENST00000568900 MKNK2Q9HBH9 465 aa24.35■■□□□ 1.49
SPNS1-212ENST00000568900 TFIP11Q9UBB9 837 aaKnown RBP24.35■■□□□ 1.49
SPNS1-212ENST00000568900 KIAA2012Q0VF49 1180 aa24.34■■□□□ 1.49
SPNS1-212ENST00000568900 STRIP1Q5VSL9 837 aa24.34■■□□□ 1.49
SPNS1-212ENST00000568900 KCNA3P22001 575 aa24.33■■□□□ 1.49
SPNS1-212ENST00000568900 RCAN1P53805 252 aa24.33■■□□□ 1.49
SPNS1-212ENST00000568900 FANCBQ8NB91 859 aa24.33■■□□□ 1.49
SPNS1-212ENST00000568900 GJB4Q9NTQ9 266 aa24.33■■□□□ 1.49
SPNS1-212ENST00000568900 KIF13BQ9NQT8 1826 aa24.33■■□□□ 1.49
SPNS1-212ENST00000568900 SLC44A5Q8NCS7 719 aa24.33■■□□□ 1.49
SPNS1-212ENST00000568900 FBXO18Q8NFZ0 1043 aa24.33■■□□□ 1.49
SPNS1-212ENST00000568900 AIFM3Q96NN9 605 aa24.33■■□□□ 1.49
SPNS1-212ENST00000568900 SLC26A6Q9BXS9 759 aa24.33■■□□□ 1.49
SPNS1-212ENST00000568900 TAOK2Q9UL54 1235 aa24.33■■□□□ 1.49
SPNS1-212ENST00000568900 PPIP5K2O43314 1243 aa24.32■■□□□ 1.48
SPNS1-212ENST00000568900 UBE2HP62256 183 aa24.32■■□□□ 1.48
SPNS1-212ENST00000568900 TFAP4Q01664 338 aa24.32■■□□□ 1.48
SPNS1-212ENST00000568900 DACT2Q5SW24 774 aa24.32■■□□□ 1.48
SPNS1-212ENST00000568900 CATIPQ7Z7H3 387 aa24.32■■□□□ 1.48
SPNS1-212ENST00000568900 TEKT1Q969V4 418 aa24.32■■□□□ 1.48
SPNS1-212ENST00000568900 ALG1Q9BT22 464 aa24.32■■□□□ 1.48
SPNS1-212ENST00000568900 ATF5Q9Y2D1 282 aaPredicted RBP24.32■■□□□ 1.48
SPNS1-212ENST00000568900 ZNF646O15015 1829 aaPredicted RBP24.32■■□□□ 1.48
SPNS1-212ENST00000568900 CCDC196A0A1B0GTZ2 297 aa24.32■■□□□ 1.48
SPNS1-212ENST00000568900 IFNAR1P17181 557 aa24.32■■□□□ 1.48
SPNS1-212ENST00000568900 SSRP1Q08945 709 aaKnown RBP24.32■■□□□ 1.48
SPNS1-212ENST00000568900 PICALMQ13492 652 aa24.32■■□□□ 1.48
SPNS1-212ENST00000568900 CCDC93Q567U6 631 aa24.32■■□□□ 1.48
SPNS1-212ENST00000568900 TTC6Q86TZ1 520 aa24.32■■□□□ 1.48
SPNS1-212ENST00000568900 KIAA0825Q8IV33 1275 aa24.32■■□□□ 1.48
SPNS1-212ENST00000568900 USP17L3A6NCW0 530 aa24.31■■□□□ 1.48
SPNS1-212ENST00000568900 USP17L4A6NCW7 530 aa24.31■■□□□ 1.48
SPNS1-212ENST00000568900 HHIPL2Q6UWX4 724 aa24.31■■□□□ 1.48
SPNS1-212ENST00000568900 USP17L1Q7RTZ2 530 aa24.31■■□□□ 1.48
SPNS1-212ENST00000568900 TMEM63CQ9P1W3 806 aa24.31■■□□□ 1.48
SPNS1-212ENST00000568900 CMTR1Q8N1G2 835 aaKnown RBP24.31■■□□□ 1.48
SPNS1-212ENST00000568900 SCAND2PQ9GZW5 306 aaPredicted RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms