RNA–Protein interactions for RNA: ENST00000568820.5

LYRM1-210, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-210ENST00000568820 ITGBL1O95965 494 aaPredicted RBP13.15□□□□□ -0.3
LYRM1-210ENST00000568820 TM4SF1P30408 202 aa13.15□□□□□ -0.3
LYRM1-210ENST00000568820 HIBADHP31937 336 aaKnown RBP13.15□□□□□ -0.3
LYRM1-210ENST00000568820 GRAPQ13588 217 aa13.15□□□□□ -0.3
LYRM1-210ENST00000568820 FAM184AQ8NB25 1140 aa13.15□□□□□ -0.3
LYRM1-210ENST00000568820 TMEM87AQ8NBN3 555 aa13.15□□□□□ -0.3
LYRM1-210ENST00000568820 GRAPLQ8TC17 118 aaPredicted RBP13.15□□□□□ -0.3
LYRM1-210ENST00000568820 SYAP1Q96A49 352 aaPredicted RBP13.15□□□□□ -0.3
LYRM1-210ENST00000568820 FAM84BQ96KN1 310 aaPredicted RBP13.15□□□□□ -0.3
LYRM1-210ENST00000568820 CNNM2Q9H8M5 875 aa13.15□□□□□ -0.3
LYRM1-210ENST00000568820 FSD2A1L4K1 749 aa13.15□□□□□ -0.31
LYRM1-210ENST00000568820 PRC1O43663 620 aa13.15□□□□□ -0.31
LYRM1-210ENST00000568820 GYS1P13807 737 aa13.15□□□□□ -0.31
LYRM1-210ENST00000568820 MRE11P49959 708 aa13.15□□□□□ -0.31
LYRM1-210ENST00000568820 SCRN1Q12765 414 aa13.15□□□□□ -0.31
LYRM1-210ENST00000568820 MB21D2Q8IYB1 491 aaPredicted RBP13.15□□□□□ -0.31
LYRM1-210ENST00000568820 RPGRQ92834 1020 aaKnown RBP13.15□□□□□ -0.31
LYRM1-210ENST00000568820 LRRC2Q9BYS8 371 aa13.15□□□□□ -0.31
LYRM1-210ENST00000568820 RAI14Q9P0K7 980 aa13.15□□□□□ -0.31
LYRM1-210ENST00000568820 ABCF2Q9UG63 623 aa13.15□□□□□ -0.31
LYRM1-210ENST00000568820 LEMD3Q9Y2U8 911 aa13.15□□□□□ -0.31
LYRM1-210ENST00000568820 DOCK2Q92608 1830 aa13.14□□□□□ -0.31
LYRM1-210ENST00000568820 PLSCR1O15162 318 aa13.14□□□□□ -0.31
LYRM1-210ENST00000568820 CYP7A1P22680 504 aa13.14□□□□□ -0.31
LYRM1-210ENST00000568820 APOBRQ0VD83 1088 aa13.14□□□□□ -0.31
LYRM1-210ENST00000568820 TXNRD1Q16881 649 aa13.14□□□□□ -0.31
LYRM1-210ENST00000568820 IFNL3Q8IZI9 196 aa13.14□□□□□ -0.31
LYRM1-210ENST00000568820 A0A0G2JLW4 131 aa13.13□□□□□ -0.31
LYRM1-210ENST00000568820 SERPINB2P05120 415 aa13.13□□□□□ -0.31
LYRM1-210ENST00000568820 PDIA3P30101 505 aaKnown RBP13.13□□□□□ -0.31
LYRM1-210ENST00000568820 PRR5LQ6MZQ0 368 aa13.13□□□□□ -0.31
LYRM1-210ENST00000568820 SMARCC2Q8TAQ2 1214 aa13.13□□□□□ -0.31
LYRM1-210ENST00000568820 RBM17Q96I25 401 aaKnown RBP13.13□□□□□ -0.31
LYRM1-210ENST00000568820 TMEM87BQ96K49 555 aa13.13□□□□□ -0.31
LYRM1-210ENST00000568820 KRT23Q9C075 422 aa13.13□□□□□ -0.31
LYRM1-210ENST00000568820 ARMT1Q9H993 441 aa13.13□□□□□ -0.31
LYRM1-210ENST00000568820 ANKIB1Q9P2G1 1089 aa13.13□□□□□ -0.31
LYRM1-210ENST00000568820 NAP1L2Q9ULW6 460 aaPredicted RBP13.13□□□□□ -0.31
LYRM1-210ENST00000568820 PCDHB3Q9Y5E6 796 aa13.13□□□□□ -0.31
LYRM1-210ENST00000568820 SLC4A4Q9Y6R1 1079 aa13.13□□□□□ -0.31
LYRM1-210ENST00000568820 MAGEB6P1A0A0J9YX57 407 aa13.12□□□□□ -0.31
LYRM1-210ENST00000568820 H3BQV1 296 aa13.12□□□□□ -0.31
LYRM1-210ENST00000568820 TDO2P48775 406 aa13.12□□□□□ -0.31
LYRM1-210ENST00000568820 CRY2Q49AN0 593 aa13.12□□□□□ -0.31
LYRM1-210ENST00000568820 TJAP1Q5JTD0 557 aa13.12□□□□□ -0.31
LYRM1-210ENST00000568820 IFFO2Q5TF58 517 aa13.12□□□□□ -0.31
LYRM1-210ENST00000568820 SPTY2D1Q68D10 685 aaPredicted RBP13.12□□□□□ -0.31
LYRM1-210ENST00000568820 NAA16Q6N069 864 aaPredicted RBP13.12□□□□□ -0.31
LYRM1-210ENST00000568820 CAVIN1Q6NZI2 390 aaKnown RBP13.12□□□□□ -0.31
LYRM1-210ENST00000568820 CCDC24Q8N4L8 307 aa13.12□□□□□ -0.31
LYRM1-210ENST00000568820 FLAD1Q8NFF5 587 aa13.12□□□□□ -0.31
LYRM1-210ENST00000568820 RNF41Q9H4P4 317 aaPredicted RBP13.12□□□□□ -0.31
LYRM1-210ENST00000568820 ZSCAN16Q9H4T2 348 aaPredicted RBP13.12□□□□□ -0.31
LYRM1-210ENST00000568820 IQSEC3Q9UPP2 1182 aaPredicted RBP13.12□□□□□ -0.31
LYRM1-210ENST00000568820 XDHP47989 1333 aa13.12□□□□□ -0.31
LYRM1-210ENST00000568820 UBR3Q6ZT12 1888 aa13.12□□□□□ -0.31
LYRM1-210ENST00000568820 GSG1L2A8MUP6 293 aa13.12□□□□□ -0.31
LYRM1-210ENST00000568820 ZNF445P59923 1031 aa13.12□□□□□ -0.31
LYRM1-210ENST00000568820 KRT85P78386 507 aa13.12□□□□□ -0.31
LYRM1-210ENST00000568820 CHST3Q7LGC8 479 aa13.12□□□□□ -0.31
LYRM1-210ENST00000568820 USP48Q86UV5 1035 aa13.12□□□□□ -0.31
LYRM1-210ENST00000568820 NSUN7Q8NE18 718 aaKnown RBP13.12□□□□□ -0.31
LYRM1-210ENST00000568820 GPT2Q8TD30 523 aa13.12□□□□□ -0.31
LYRM1-210ENST00000568820 MTRQ99707 1265 aa13.12□□□□□ -0.31
LYRM1-210ENST00000568820 ANGEL1Q9UNK9 670 aaKnown RBP13.12□□□□□ -0.31
LYRM1-210ENST00000568820 COL4A1P02462 1669 aa13.11□□□□□ -0.31
LYRM1-210ENST00000568820 A0A1B0GUL6 1792 aa13.11□□□□□ -0.31
LYRM1-210ENST00000568820 BBOX1O75936 387 aa13.11□□□□□ -0.31
LYRM1-210ENST00000568820 UBE2HP62256 183 aa13.11□□□□□ -0.31
LYRM1-210ENST00000568820 FOXD4L6Q3SYB3 417 aaPredicted RBP13.11□□□□□ -0.31
LYRM1-210ENST00000568820 AKNAD1Q5T1N1 836 aa13.11□□□□□ -0.31
LYRM1-210ENST00000568820 FOXD4L3Q6VB84 417 aaPredicted RBP13.11□□□□□ -0.31
LYRM1-210ENST00000568820 MFSD6Q6ZSS7 791 aa13.11□□□□□ -0.31
LYRM1-210ENST00000568820 TMC4Q7Z404 712 aa13.11□□□□□ -0.31
LYRM1-210ENST00000568820 LCORLQ8N3X6 602 aa13.11□□□□□ -0.31
LYRM1-210ENST00000568820 MTA3Q9BTC8 594 aa13.11□□□□□ -0.31
LYRM1-210ENST00000568820 LAMA4Q16363 1823 aa13.1□□□□□ -0.31
LYRM1-210ENST00000568820 CASZ1Q86V15 1759 aa13.1□□□□□ -0.31
LYRM1-210ENST00000568820 KLF18A0A0U1RQI7 1052 aa13.1□□□□□ -0.31
LYRM1-210ENST00000568820 PTPDC1A2A3K4 754 aa13.1□□□□□ -0.31
LYRM1-210ENST00000568820 JAK2O60674 1132 aa13.1□□□□□ -0.31
LYRM1-210ENST00000568820 SART3Q15020 963 aaKnown RBP13.1□□□□□ -0.31
LYRM1-210ENST00000568820 ZSCAN23Q3MJ62 389 aa13.1□□□□□ -0.31
LYRM1-210ENST00000568820 GIMAP6Q6P9H5 292 aa13.1□□□□□ -0.31
LYRM1-210ENST00000568820 C15orf52Q6ZUT6 534 aaKnown RBP13.1□□□□□ -0.31
LYRM1-210ENST00000568820 CDC37L1Q7L3B6 337 aa13.1□□□□□ -0.31
LYRM1-210ENST00000568820 ZNF804AQ7Z570 1209 aa13.1□□□□□ -0.31
LYRM1-210ENST00000568820 TBC1D10CQ8IV04 446 aa13.1□□□□□ -0.31
LYRM1-210ENST00000568820 NLGN1Q8N2Q7 840 aa13.1□□□□□ -0.31
LYRM1-210ENST00000568820 MIGA1Q8NAN2 632 aa13.1□□□□□ -0.31
LYRM1-210ENST00000568820 RGS22Q8NE09 1264 aa13.1□□□□□ -0.31
LYRM1-210ENST00000568820 WDR66Q8TBY9 1149 aa13.1□□□□□ -0.31
LYRM1-210ENST00000568820 STAG1Q8WVM7 1258 aa13.1□□□□□ -0.31
LYRM1-210ENST00000568820 SCAND2PQ9GZW5 306 aaPredicted RBP13.1□□□□□ -0.31
LYRM1-210ENST00000568820 IL21Q9HBE4 155 aa13.1□□□□□ -0.31
LYRM1-210ENST00000568820 EPB41L4AQ9HCS5 686 aaPredicted RBP13.1□□□□□ -0.31
LYRM1-210ENST00000568820 TFCP2L1Q9NZI6 479 aa13.1□□□□□ -0.31
LYRM1-210ENST00000568820 CNPY2Q9Y2B0 182 aa13.1□□□□□ -0.31
LYRM1-210ENST00000568820 BRWD3Q6RI45 1802 aa13.1□□□□□ -0.31
LYRM1-210ENST00000568820 GOLGA8BA8MQT2 603 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms