RNA–Protein interactions for RNA: ENST00000568378.5

KARS-209, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5 BASIC

Gene KARS, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-209ENST00000568378 GAS2L1Q99501 681 aaPredicted RBP12.09□□□□□ -0.47
KARS-209ENST00000568378 ASCC2Q9H1I8 757 aaPredicted RBP12.09□□□□□ -0.47
KARS-209ENST00000568378 SPINK5Q9NQ38 1064 aaPredicted RBP12.09□□□□□ -0.47
KARS-209ENST00000568378 MROH5Q6ZUA9 1318 aa12.09□□□□□ -0.47
KARS-209ENST00000568378 ATRNL1Q5VV63 1379 aa12.08□□□□□ -0.48
KARS-209ENST00000568378 RGS2P41220 211 aa12.08□□□□□ -0.48
KARS-209ENST00000568378 FLIIQ13045 1269 aa12.08□□□□□ -0.48
KARS-209ENST00000568378 DIXDC1Q155Q3 683 aa12.08□□□□□ -0.48
KARS-209ENST00000568378 EPHA10Q5JZY3 1008 aa12.08□□□□□ -0.48
KARS-209ENST00000568378 PUS3Q9BZE2 481 aaKnown RBP12.08□□□□□ -0.48
KARS-209ENST00000568378 MORF4L1Q9UBU8 362 aa12.08□□□□□ -0.48
KARS-209ENST00000568378 PHIPQ8WWQ0 1821 aa12.08□□□□□ -0.48
KARS-209ENST00000568378 DNM1LO00429 736 aa12.07□□□□□ -0.48
KARS-209ENST00000568378 DNAJB2P25686 324 aa12.07□□□□□ -0.48
KARS-209ENST00000568378 CNGA1P29973 690 aa12.07□□□□□ -0.48
KARS-209ENST00000568378 RGS3P49796 1198 aa12.07□□□□□ -0.48
KARS-209ENST00000568378 HMGCS2P54868 508 aa12.07□□□□□ -0.48
KARS-209ENST00000568378 IRX3P78415 501 aaPredicted RBP12.07□□□□□ -0.48
KARS-209ENST00000568378 SPP2Q13103 211 aa12.07□□□□□ -0.48
KARS-209ENST00000568378 CCL14Q16627 93 aa12.07□□□□□ -0.48
KARS-209ENST00000568378 METTL24Q5JXM2 366 aa12.07□□□□□ -0.48
KARS-209ENST00000568378 WDR66Q8TBY9 1149 aa12.07□□□□□ -0.48
KARS-209ENST00000568378 APBA2Q99767 749 aa12.07□□□□□ -0.48
KARS-209ENST00000568378 ZNF576Q9H609 170 aa12.07□□□□□ -0.48
KARS-209ENST00000568378 CWC22Q9HCG8 908 aaKnown RBP12.07□□□□□ -0.48
KARS-209ENST00000568378 FRMPD3Q5JV73 1810 aa12.07□□□□□ -0.48
KARS-209ENST00000568378 LOC285556D6RIA3 1793 aa12.06□□□□□ -0.48
KARS-209ENST00000568378 MSCO60682 206 aa12.06□□□□□ -0.48
KARS-209ENST00000568378 ENTPD3O75355 529 aa12.06□□□□□ -0.48
KARS-209ENST00000568378 MAPK4P31152 587 aa12.06□□□□□ -0.48
KARS-209ENST00000568378 MFSD14CQ5VZR4 134 aa12.06□□□□□ -0.48
KARS-209ENST00000568378 GPRC5AQ8NFJ5 357 aa12.06□□□□□ -0.48
KARS-209ENST00000568378 SNX27Q96L92 541 aa12.06□□□□□ -0.48
KARS-209ENST00000568378 DDX20Q9UHI6 824 aaKnown RBP12.06□□□□□ -0.48
KARS-209ENST00000568378 NCOR1O75376 2440 aa12.06□□□□□ -0.48
KARS-209ENST00000568378 BDP1A6H8Y1 2624 aa12.06□□□□□ -0.48
KARS-209ENST00000568378 TRIM60Q495X7 471 aa12.05□□□□□ -0.48
KARS-209ENST00000568378 AKNAD1Q5T1N1 836 aa12.05□□□□□ -0.48
KARS-209ENST00000568378 POTEEQ6S8J3 1075 aa12.05□□□□□ -0.48
KARS-209ENST00000568378 ALYREFQ86V81 257 aaKnown RBP12.05□□□□□ -0.48
KARS-209ENST00000568378 ZNF280CQ8ND82 737 aa12.05□□□□□ -0.48
KARS-209ENST00000568378 LPAR1Q92633 364 aa12.05□□□□□ -0.48
KARS-209ENST00000568378 TIFAQ96CG3 184 aa12.05□□□□□ -0.48
KARS-209ENST00000568378 NECAB3Q96P71 396 aaPredicted RBP12.05□□□□□ -0.48
KARS-209ENST00000568378 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.04□□□□□ -0.48
KARS-209ENST00000568378 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.04□□□□□ -0.48
KARS-209ENST00000568378 KBTBD13C9JR72 458 aa12.04□□□□□ -0.48
KARS-209ENST00000568378 LDHBP07195 334 aaKnown RBP12.04□□□□□ -0.48
KARS-209ENST00000568378 SLURP2P0DP57 97 aa12.04□□□□□ -0.48
KARS-209ENST00000568378 CCDC85BQ15834 202 aaPredicted RBP12.04□□□□□ -0.48
KARS-209ENST00000568378 SLC39A5Q6ZMH5 540 aa12.04□□□□□ -0.48
KARS-209ENST00000568378 GPR142Q7Z601 462 aa12.04□□□□□ -0.48
KARS-209ENST00000568378 PLEKHH3Q7Z736 793 aa12.04□□□□□ -0.48
KARS-209ENST00000568378 USP6NLQ92738 828 aa12.04□□□□□ -0.48
KARS-209ENST00000568378 LRFN3Q9BTN0 628 aa12.04□□□□□ -0.48
KARS-209ENST00000568378 TBC1D2Q9BYX2 928 aa12.04□□□□□ -0.48
KARS-209ENST00000568378 PDLIM7Q9NR12 457 aa12.04□□□□□ -0.48
KARS-209ENST00000568378 C9orf78Q9NZ63 289 aaPredicted RBP12.04□□□□□ -0.48
KARS-209ENST00000568378 ADAMTS8Q9UP79 889 aa12.04□□□□□ -0.48
KARS-209ENST00000568378 TRIM43BA6NCK2 446 aa12.03□□□□□ -0.48
KARS-209ENST00000568378 DDTLA6NHG4 134 aaPredicted RBP12.03□□□□□ -0.48
KARS-209ENST00000568378 GRM8O00222 908 aa12.03□□□□□ -0.48
KARS-209ENST00000568378 PEX10O60683 326 aa12.03□□□□□ -0.48
KARS-209ENST00000568378 MYCNP04198 464 aaPredicted RBP12.03□□□□□ -0.48
KARS-209ENST00000568378 IFIT1P09914 478 aaKnown RBP12.03□□□□□ -0.48
KARS-209ENST00000568378 PRDX5P30044 214 aa12.03□□□□□ -0.48
KARS-209ENST00000568378 MAP3K10Q02779 954 aa12.03□□□□□ -0.48
KARS-209ENST00000568378 PICALMQ13492 652 aa12.03□□□□□ -0.48
KARS-209ENST00000568378 RALBP1Q15311 655 aa12.03□□□□□ -0.48
KARS-209ENST00000568378 TWISTNBQ3B726 338 aaPredicted RBP12.03□□□□□ -0.48
KARS-209ENST00000568378 TMEM31Q5JXX7 168 aa12.03□□□□□ -0.48
KARS-209ENST00000568378 GJC2Q5T442 439 aaPredicted RBP12.03□□□□□ -0.48
KARS-209ENST00000568378 SH3BP5LQ7L8J4 393 aa12.03□□□□□ -0.48
KARS-209ENST00000568378 SH3RF1Q7Z6J0 888 aa12.03□□□□□ -0.48
KARS-209ENST00000568378 TRIM43Q96BQ3 446 aaPredicted RBP12.03□□□□□ -0.48
KARS-209ENST00000568378 IDI2Q9BXS1 227 aa12.03□□□□□ -0.48
KARS-209ENST00000568378 TSPYL2Q9H2G4 693 aaPredicted RBP12.03□□□□□ -0.48
KARS-209ENST00000568378 TXNRD2Q9NNW7 524 aa12.03□□□□□ -0.48
KARS-209ENST00000568378 PIEZO1Q92508 2521 aa12.02□□□□□ -0.48
KARS-209ENST00000568378 MYH13Q9UKX3 1938 aa12.02□□□□□ -0.49
KARS-209ENST00000568378 APAF1O14727 1248 aa12.02□□□□□ -0.49
KARS-209ENST00000568378 PDE8BO95263 885 aa12.02□□□□□ -0.49
KARS-209ENST00000568378 IGFBP4P22692 258 aa12.02□□□□□ -0.49
KARS-209ENST00000568378 HERVK_113P62684 666 aa12.02□□□□□ -0.49
KARS-209ENST00000568378 MORN1Q5T089 497 aa12.02□□□□□ -0.49
KARS-209ENST00000568378 ARRDC4Q8NCT1 418 aa12.02□□□□□ -0.49
KARS-209ENST00000568378 TSR2Q969E8 191 aaKnown RBP12.02□□□□□ -0.49
KARS-209ENST00000568378 P2RX7Q99572 595 aaKnown RBP12.02□□□□□ -0.49
KARS-209ENST00000568378 PAGR1Q9BTK6 254 aa12.02□□□□□ -0.49
KARS-209ENST00000568378 PRDM12Q9H4Q4 367 aa12.02□□□□□ -0.49
KARS-209ENST00000568378 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.02□□□□□ -0.49
KARS-209ENST00000568378 AS3MTQ9HBK9 375 aa12.02□□□□□ -0.49
KARS-209ENST00000568378 TMOD4Q9NZQ9 345 aa12.02□□□□□ -0.49
KARS-209ENST00000568378 UTYO14607 1347 aa12.02□□□□□ -0.49
KARS-209ENST00000568378 USP17L5A8MUK1 530 aa12.01□□□□□ -0.49
KARS-209ENST00000568378 F6X3S4 739 aa12.01□□□□□ -0.49
KARS-209ENST00000568378 GLRX3O76003 335 aaKnown RBP12.01□□□□□ -0.49
KARS-209ENST00000568378 EPHB4P54760 987 aa12.01□□□□□ -0.49
KARS-209ENST00000568378 ERVK-9P63128 1117 aa12.01□□□□□ -0.49
KARS-209ENST00000568378 ERVK-24P63145 666 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms