RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.76□□□□□ -1.49
HERPUD1-213ENST00000568358 REPIN1Q9BWE0 567 aaKnown RBP5.76□□□□□ -1.49
HERPUD1-213ENST00000568358 ZNF341Q9BYN7 854 aa5.76□□□□□ -1.49
HERPUD1-213ENST00000568358 ZSWIM6Q9HCJ5 1215 aa5.76□□□□□ -1.49
HERPUD1-213ENST00000568358 TRIM17Q9Y577 477 aa5.76□□□□□ -1.49
HERPUD1-213ENST00000568358 LRRFIP2Q9Y608 721 aaKnown RBP5.76□□□□□ -1.49
HERPUD1-213ENST00000568358 CCL15-CCL14A0A0B4J2E2 113 aa5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 SRGAP3O43295 1099 aa5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 GNAI2P04899 355 aa5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 RFX5P48382 616 aaPredicted RBP5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 CACNB3P54284 484 aa5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 TCP10Q12799 353 aa5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 CRHR2Q13324 411 aa5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 SNAPC2Q13487 334 aa5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 VGLL4Q14135 290 aa5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 MVPQ14764 893 aaKnown RBP5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 TAF1CQ15572 869 aaPredicted RBP5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 CCL15Q16663 113 aa5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 APOBEC3HQ6NTF7 200 aaKnown RBP5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 MIGA2Q7L4E1 593 aa5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 ATG9AQ7Z3C6 839 aa5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 DZIP1Q86YF9 867 aaKnown RBP5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 ZSCAN29Q8IWY8 852 aaPredicted RBP5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.75□□□□□ -1.495e-16■■■■□ 23.7
HERPUD1-213ENST00000568358 FAM151AQ8WW52 585 aa5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 TEPSINQ96N21 525 aa5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 NEUROD6Q96NK8 337 aa5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 EFCC1Q9HA90 598 aa5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 COPRSQ9NQ92 184 aa5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 EMILIN3Q9NT22 766 aa5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 USP40Q9NVE5 1235 aa5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 ABCF2Q9UG63 623 aa5.75□□□□□ -1.49
HERPUD1-213ENST00000568358 PDE4DIPQ5VU43 2346 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 IGF2BP3O00425 579 aaKnown RBP eCLIP5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 TBC1D12O60347 775 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 LDHCP07864 332 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 HOXD10P28358 340 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 GJA5P36382 358 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 TIMM10P62072 90 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 GSTO1P78417 241 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 PPATQ06203 517 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 OS9Q13438 667 aaPredicted RBP5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 GRIK5Q16478 980 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 CCDC102BQ68D86 513 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 CDC42EP5Q6NZY7 148 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 ATF7IPQ6VMQ6 1270 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 OTOP1Q7RTM1 612 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 FTSJ3Q8IY81 847 aaKnown RBP5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 ZKSCAN4Q969J2 545 aaPredicted RBP5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 PBXIP1Q96AQ6 731 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 MEIS3Q99687 375 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 NOL10Q9BSC4 688 aaKnown RBP5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 R3HDMLQ9H3Y0 253 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 PICK1Q9NRD5 415 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 PA2G4Q9UQ80 394 aaKnown RBP5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 LAMB1P07942 1786 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 OTOFQ9HC10 1997 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 AOX1Q06278 1338 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 SALL1Q9NSC2 1324 aa5.74□□□□□ -1.49
HERPUD1-213ENST00000568358 SSC5DA1L4H1 1573 aa5.73□□□□□ -1.49
HERPUD1-213ENST00000568358 KIAA0100Q14667 2235 aaKnown RBP5.73□□□□□ -1.49
HERPUD1-213ENST00000568358 A0A1B0GUL7 405 aa5.73□□□□□ -1.49
HERPUD1-213ENST00000568358 GNRH1P01148 92 aa5.73□□□□□ -1.49
HERPUD1-213ENST00000568358 UQCRFS1P1P0C7P4 283 aa5.73□□□□□ -1.49
HERPUD1-213ENST00000568358 FECHP22830 423 aa5.73□□□□□ -1.49
HERPUD1-213ENST00000568358 PRDX5P30044 214 aa5.73□□□□□ -1.49
HERPUD1-213ENST00000568358 PHKA1P46020 1223 aa5.73□□□□□ -1.49
HERPUD1-213ENST00000568358 TFCP2Q12800 502 aa5.73□□□□□ -1.49
HERPUD1-213ENST00000568358 PPIL2Q13356 520 aa5.73□□□□□ -1.49
HERPUD1-213ENST00000568358 DIXDC1Q155Q3 683 aa5.73□□□□□ -1.49
HERPUD1-213ENST00000568358 CCDC158Q5M9N0 1113 aa5.73□□□□□ -1.49
HERPUD1-213ENST00000568358 ZKSCAN2Q63HK3 967 aa5.73□□□□□ -1.49
HERPUD1-213ENST00000568358 CD99L2Q8TCZ2 262 aa5.73□□□□□ -1.49
HERPUD1-213ENST00000568358 BRI3BPQ8WY22 251 aa5.73□□□□□ -1.49
HERPUD1-213ENST00000568358 XAGE2Q96GT9 111 aa5.73□□□□□ -1.49
HERPUD1-213ENST00000568358 PTPN18Q99952 460 aa5.73□□□□□ -1.49
HERPUD1-213ENST00000568358 ZCCHC17Q9NP64 241 aaKnown RBP5.73□□□□□ -1.49
HERPUD1-213ENST00000568358 PTPN22Q9Y2R2 807 aa5.73□□□□□ -1.49
HERPUD1-213ENST00000568358 DAGLAQ9Y4D2 1042 aa5.73□□□□□ -1.49
HERPUD1-213ENST00000568358 RPAP1Q9BWH6 1393 aaPredicted RBP5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 BTBD19C9JJ37 291 aa5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 DPYSL4O14531 572 aa5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 CXCL11O14625 94 aa5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 TLR2O60603 784 aa5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 ENTPD3O75355 529 aa5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 BCAR3O75815 825 aa5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 MAP4K4O95819 1239 aaPredicted RBP5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 TRIM27P14373 513 aa5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 ADORA1P30542 326 aa5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 PRMT2P55345 433 aa5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 HNRNPUQ00839 825 aaKnown RBP eCLIP5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 SLC4A8Q2Y0W8 1093 aa5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 SLC9C1Q4G0N8 1177 aa5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 PPP1R15BQ5SWA1 713 aa5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 DIEXFQ68CQ4 756 aaKnown RBP5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 FASTKD5Q7L8L6 764 aaKnown RBP5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 FAM43AQ8N2R8 423 aa5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.72□□□□□ -1.49
HERPUD1-213ENST00000568358 IDI2Q9BXS1 227 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms