RNA–Protein interactions for RNA: ENST00000567868.5

SPSB3-209, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 3

Gene SPSB3, Length 1,628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-209ENST00000567868 HMGB1P09429 215 aaKnown RBP26.5■■□□□ 1.83
SPSB3-209ENST00000567868 FGRP09769 529 aa26.5■■□□□ 1.83
SPSB3-209ENST00000567868 CASTP20810 708 aaKnown RBP26.5■■□□□ 1.83
SPSB3-209ENST00000567868 RASA3Q14644 834 aa26.5■■□□□ 1.83
SPSB3-209ENST00000567868 RALYLQ86SE5 291 aaKnown RBP26.5■■□□□ 1.83
SPSB3-209ENST00000567868 KRT23Q9C075 422 aa26.5■■□□□ 1.83
SPSB3-209ENST00000567868 ZSWIM6Q9HCJ5 1215 aa26.5■■□□□ 1.83
SPSB3-209ENST00000567868 INCENPQ9NQS7 918 aa26.5■■□□□ 1.83
SPSB3-209ENST00000567868 RBM19Q9Y4C8 960 aaKnown RBP26.5■■□□□ 1.83
SPSB3-209ENST00000567868 TACC3Q9Y6A5 838 aa26.5■■□□□ 1.83
SPSB3-209ENST00000567868 PITPNM2Q9BZ72 1349 aa26.5■■□□□ 1.83
SPSB3-209ENST00000567868 BLOC1S2Q6QNY1 142 aa26.5■■□□□ 1.83
SPSB3-209ENST00000567868 FOXP4Q8IVH2 680 aaPredicted RBP26.5■■□□□ 1.83
SPSB3-209ENST00000567868 ZC3H15Q8WU90 426 aaKnown RBP26.5■■□□□ 1.83
SPSB3-209ENST00000567868 DYNLL2Q96FJ2 89 aa26.5■■□□□ 1.83
SPSB3-209ENST00000567868 TMEM39BQ9GZU3 492 aa26.5■■□□□ 1.83
SPSB3-209ENST00000567868 EHD4Q9H223 541 aa26.5■■□□□ 1.83
SPSB3-209ENST00000567868 ZNF287Q9HBT7 754 aa26.5■■□□□ 1.83
SPSB3-209ENST00000567868 SERPINB13Q9UIV8 391 aa26.5■■□□□ 1.83
SPSB3-209ENST00000567868 LAMB1P07942 1786 aa26.49■■□□□ 1.83
SPSB3-209ENST00000567868 C16orf86Q6ZW13 317 aa26.49■■□□□ 1.83
SPSB3-209ENST00000567868 DEFB129Q9H1M3 183 aa26.49■■□□□ 1.83
SPSB3-209ENST00000567868 TOMM22Q9NS69 142 aa26.49■■□□□ 1.83
SPSB3-209ENST00000567868 TAOK2Q9UL54 1235 aa26.49■■□□□ 1.83
SPSB3-209ENST00000567868 CYP46A1Q9Y6A2 500 aa26.49■■□□□ 1.83
SPSB3-209ENST00000567868 VEGFAP15692 232 aaPredicted RBP26.48■■□□□ 1.83
SPSB3-209ENST00000567868 RUFY3Q7L099 469 aa26.48■■□□□ 1.83
SPSB3-209ENST00000567868 IL27Q8NEV9 243 aa26.48■■□□□ 1.83
SPSB3-209ENST00000567868 DCPSQ96C86 337 aaKnown RBP26.48■■□□□ 1.83
SPSB3-209ENST00000567868 CSRNP1Q96S65 589 aa26.48■■□□□ 1.83
SPSB3-209ENST00000567868 UPF3BQ9BZI7 483 aaKnown RBP26.48■■□□□ 1.83
SPSB3-209ENST00000567868 RRAGCQ9HB90 399 aa26.48■■□□□ 1.83
SPSB3-209ENST00000567868 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.48■■□□□ 1.83
SPSB3-209ENST00000567868 NEDD4P46934 1319 aa26.48■■□□□ 1.83
SPSB3-209ENST00000567868 ORC4O43929 436 aa26.47■■□□□ 1.83
SPSB3-209ENST00000567868 GABPAQ06546 454 aa26.47■■□□□ 1.83
SPSB3-209ENST00000567868 RRP12Q5JTH9 1297 aaKnown RBP26.47■■□□□ 1.83
SPSB3-209ENST00000567868 MKNK2Q9HBH9 465 aa26.47■■□□□ 1.83
SPSB3-209ENST00000567868 SWAP70Q9UH65 585 aa26.47■■□□□ 1.83
SPSB3-209ENST00000567868 SCAF8Q9UPN6 1271 aaKnown RBP26.47■■□□□ 1.83
SPSB3-209ENST00000567868 CDK8P49336 464 aa26.47■■□□□ 1.83
SPSB3-209ENST00000567868 NEK4P51957 841 aa26.47■■□□□ 1.83
SPSB3-209ENST00000567868 EAPPQ56P03 285 aaPredicted RBP26.47■■□□□ 1.83
SPSB3-209ENST00000567868 CRACR2BQ8N4Y2 399 aaPredicted RBP26.47■■□□□ 1.83
SPSB3-209ENST00000567868 PGAP2Q9UHJ9 254 aa26.47■■□□□ 1.83
SPSB3-209ENST00000567868 PPP2R3BQ9Y5P8 575 aa26.47■■□□□ 1.83
SPSB3-209ENST00000567868 B4E1Z4 1266 aa26.46■■□□□ 1.83
SPSB3-209ENST00000567868 PRDM1O75626 825 aa26.46■■□□□ 1.83
SPSB3-209ENST00000567868 NT5C2P49902 561 aa26.46■■□□□ 1.83
SPSB3-209ENST00000567868 DHX32Q7L7V1 743 aaKnown RBP26.46■■□□□ 1.83
SPSB3-209ENST00000567868 MB21D2Q8IYB1 491 aaPredicted RBP26.46■■□□□ 1.83
SPSB3-209ENST00000567868 ESR2Q92731 530 aa26.46■■□□□ 1.83
SPSB3-209ENST00000567868 TRIM34Q9BYJ4 488 aa26.46■■□□□ 1.83
SPSB3-209ENST00000567868 CPA1P15085 419 aa26.45■■□□□ 1.82
SPSB3-209ENST00000567868 RPS6KB1P23443 525 aa26.45■■□□□ 1.82
SPSB3-209ENST00000567868 METTL16Q86W50 562 aaKnown RBP26.45■■□□□ 1.82
SPSB3-209ENST00000567868 MCM5P33992 734 aa26.44■■□□□ 1.82
SPSB3-209ENST00000567868 ZNF444Q8N0Y2 327 aaPredicted RBP26.44■■□□□ 1.82
SPSB3-209ENST00000567868 SLC44A5Q8NCS7 719 aa26.44■■□□□ 1.82
SPSB3-209ENST00000567868 TEPSINQ96N21 525 aa26.44■■□□□ 1.82
SPSB3-209ENST00000567868 RANBP6O60518 1105 aaKnown RBP26.43■■□□□ 1.82
SPSB3-209ENST00000567868 KDM4AO75164 1064 aa26.43■■□□□ 1.82
SPSB3-209ENST00000567868 COL9A3Q14050 684 aaPredicted RBP26.43■■□□□ 1.82
SPSB3-209ENST00000567868 SULF1Q8IWU6 871 aa26.43■■□□□ 1.82
SPSB3-209ENST00000567868 HERC5Q9UII4 1024 aaKnown RBP26.43■■□□□ 1.82
SPSB3-209ENST00000567868 ST18O60284 1047 aa26.43■■□□□ 1.82
SPSB3-209ENST00000567868 EXOSC10Q01780 885 aaKnown RBP26.43■■□□□ 1.82
SPSB3-209ENST00000567868 PDRG1Q9NUG6 133 aa26.43■■□□□ 1.82
SPSB3-209ENST00000567868 ZSWIM5Q9P217 1185 aa26.43■■□□□ 1.82
SPSB3-209ENST00000567868 CDAN1Q8IWY9 1227 aa26.42■■□□□ 1.82
SPSB3-209ENST00000567868 ZNF526Q8TF50 670 aaPredicted RBP26.42■■□□□ 1.82
SPSB3-209ENST00000567868 CLEC11AQ9Y240 323 aa26.42■■□□□ 1.82
SPSB3-209ENST00000567868 TBC1D12O60347 775 aa26.41■■□□□ 1.82
SPSB3-209ENST00000567868 RASA1P20936 1047 aa26.41■■□□□ 1.82
SPSB3-209ENST00000567868 CYB5R4Q7L1T6 521 aa26.41■■□□□ 1.82
SPSB3-209ENST00000567868 WDR19Q8NEZ3 1342 aa26.41■■□□□ 1.82
SPSB3-209ENST00000567868 NKX2-3Q8TAU0 364 aa26.41■■□□□ 1.82
SPSB3-209ENST00000567868 HOOK2Q96ED9 719 aa26.41■■□□□ 1.82
SPSB3-209ENST00000567868 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.41■■□□□ 1.82
SPSB3-209ENST00000567868 PRC1O43663 620 aa26.4■■□□□ 1.82
SPSB3-209ENST00000567868 SHMT1P34896 483 aa26.4■■□□□ 1.82
SPSB3-209ENST00000567868 ANP32AP39687 249 aaKnown RBP26.4■■□□□ 1.82
SPSB3-209ENST00000567868 CHST3Q7LGC8 479 aa26.4■■□□□ 1.82
SPSB3-209ENST00000567868 TTC14Q96N46 770 aa26.4■■□□□ 1.82
SPSB3-209ENST00000567868 DNAJC18Q9H819 358 aa26.4■■□□□ 1.82
SPSB3-209ENST00000567868 NMRK2Q9NPI5 230 aa26.4■■□□□ 1.82
SPSB3-209ENST00000567868 TSPY2A6NKD2 308 aa26.39■■□□□ 1.82
SPSB3-209ENST00000567868 MAP3K10Q02779 954 aa26.39■■□□□ 1.82
SPSB3-209ENST00000567868 NBPF12Q5TAG4 269 aaPredicted RBP26.39■■□□□ 1.82
SPSB3-209ENST00000567868 TATDN1Q6P1N9 297 aa26.39■■□□□ 1.82
SPSB3-209ENST00000567868 KRT26Q7Z3Y9 468 aa26.39■■□□□ 1.82
SPSB3-209ENST00000567868 TCEANC2Q96MN5 208 aa26.39■■□□□ 1.82
SPSB3-209ENST00000567868 ALDH8A1Q9H2A2 487 aaPredicted RBP26.39■■□□□ 1.82
SPSB3-209ENST00000567868 SIPA1L1O43166 1804 aa26.39■■□□□ 1.81
SPSB3-209ENST00000567868 FAM196BA6NMK8 535 aa26.39■■□□□ 1.81
SPSB3-209ENST00000567868 SLURP2P0DP57 97 aa26.39■■□□□ 1.81
SPSB3-209ENST00000567868 ANTXR2P58335 489 aa26.39■■□□□ 1.81
SPSB3-209ENST00000567868 TFAP4Q01664 338 aa26.39■■□□□ 1.81
SPSB3-209ENST00000567868 FAM47AQ5JRC9 791 aa26.39■■□□□ 1.81
SPSB3-209ENST00000567868 FGD1P98174 961 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms