RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 HCLS1P14317 486 aaPredicted RBP7.82□□□□□ -1.16
SHCBP1-206ENST00000567698 ASPAP45381 313 aa7.82□□□□□ -1.16
SHCBP1-206ENST00000567698 CWF19L2Q2TBE0 894 aaKnown RBP7.82□□□□□ -1.16
SHCBP1-206ENST00000567698 FAM20CQ8IXL6 584 aa7.82□□□□□ -1.16
SHCBP1-206ENST00000567698 REXO1Q8N1G1 1221 aaKnown RBP7.82□□□□□ -1.16
SHCBP1-206ENST00000567698 SEMA6CQ9H3T2 930 aa7.82□□□□□ -1.16
SHCBP1-206ENST00000567698 EHMT1Q9H9B1 1298 aa7.82□□□□□ -1.16
SHCBP1-206ENST00000567698 EFR3BQ9Y2G0 817 aa7.82□□□□□ -1.16
SHCBP1-206ENST00000567698 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.81□□□□□ -1.16
SHCBP1-206ENST00000567698 PRAMEF27A3QJZ7 478 aa7.81□□□□□ -1.16
SHCBP1-206ENST00000567698 BPNT1O95861 308 aa7.81□□□□□ -1.16
SHCBP1-206ENST00000567698 FGRP09769 529 aa7.81□□□□□ -1.16
SHCBP1-206ENST00000567698 GRK4P32298 578 aa7.81□□□□□ -1.16
SHCBP1-206ENST00000567698 HNRNPUQ00839 825 aaKnown RBP eCLIP7.81□□□□□ -1.16
SHCBP1-206ENST00000567698 NKG7Q16617 165 aa7.81□□□□□ -1.16
SHCBP1-206ENST00000567698 FBLIM1Q8WUP2 373 aa7.81□□□□□ -1.16
SHCBP1-206ENST00000567698 UTP4Q969X6 686 aaKnown RBP7.81□□□□□ -1.16
SHCBP1-206ENST00000567698 HTR3BO95264 441 aa7.8□□□□□ -1.16
SHCBP1-206ENST00000567698 BMP3P12645 472 aa7.8□□□□□ -1.16
SHCBP1-206ENST00000567698 SLBPQ14493 270 aaKnown RBP eCLIP7.8□□□□□ -1.16
SHCBP1-206ENST00000567698 TMEM201Q5SNT2 666 aa7.8□□□□□ -1.16
SHCBP1-206ENST00000567698 MCF2L2Q86YR7 1114 aa7.8□□□□□ -1.16
SHCBP1-206ENST00000567698 ACSF2Q96CM8 615 aaPredicted RBP7.8□□□□□ -1.16
SHCBP1-206ENST00000567698 SEC16BQ96JE7 1060 aa7.8□□□□□ -1.16
SHCBP1-206ENST00000567698 SPATA32Q96LK8 384 aa7.8□□□□□ -1.16
SHCBP1-206ENST00000567698 PSMG3-AS1Q96PY0 264 aa7.8□□□□□ -1.16
SHCBP1-206ENST00000567698 REV1Q9UBZ9 1251 aa7.8□□□□□ -1.16
SHCBP1-206ENST00000567698 ZNRF3Q9ULT6 936 aa7.8□□□□□ -1.16
SHCBP1-206ENST00000567698 PPT2Q9UMR5 302 aa7.8□□□□□ -1.16
SHCBP1-206ENST00000567698 PCDHB14Q9Y5E9 798 aa7.8□□□□□ -1.16
SHCBP1-206ENST00000567698 SART1O43290 800 aaKnown RBP7.79□□□□□ -1.16
SHCBP1-206ENST00000567698 NFICP08651 508 aa7.79□□□□□ -1.16
SHCBP1-206ENST00000567698 CAP2P40123 477 aa7.79□□□□□ -1.16
SHCBP1-206ENST00000567698 NASPP49321 788 aaPredicted RBP7.79□□□□□ -1.16
SHCBP1-206ENST00000567698 COL9A2Q14055 689 aaPredicted RBP7.79□□□□□ -1.16
SHCBP1-206ENST00000567698 SMYD4Q8IYR2 804 aaPredicted RBP7.79□□□□□ -1.16
SHCBP1-206ENST00000567698 SPOCK3Q9BQ16 436 aa7.79□□□□□ -1.16
SHCBP1-206ENST00000567698 TJP2Q9UDY2 1190 aa7.79□□□□□ -1.16
SHCBP1-206ENST00000567698 ADAM30Q9UKF2 790 aa7.79□□□□□ -1.16
SHCBP1-206ENST00000567698 GAS2O43903 313 aaKnown RBP7.78□□□□□ -1.16
SHCBP1-206ENST00000567698 MAP4P27816 1152 aaKnown RBP7.78□□□□□ -1.16
SHCBP1-206ENST00000567698 NKAPLQ5M9Q1 402 aa7.78□□□□□ -1.16
SHCBP1-206ENST00000567698 GK5Q6ZS86 529 aa7.78□□□□□ -1.16
SHCBP1-206ENST00000567698 GATA6Q92908 595 aa7.78□□□□□ -1.16
SHCBP1-206ENST00000567698 ANTXR1Q9H6X2 564 aa7.78□□□□□ -1.16
SHCBP1-206ENST00000567698 C1GALT1Q9NS00 363 aa7.78□□□□□ -1.16
SHCBP1-206ENST00000567698 PGRP06401 933 aa7.77□□□□□ -1.17
SHCBP1-206ENST00000567698 RAB6AP20340 208 aa7.77□□□□□ -1.17
SHCBP1-206ENST00000567698 ZNF165P49910 485 aa7.77□□□□□ -1.17
SHCBP1-206ENST00000567698 MRPL41Q8IXM3 137 aaKnown RBP7.77□□□□□ -1.17
SHCBP1-206ENST00000567698 ZNF507Q8TCN5 953 aa7.77□□□□□ -1.17
SHCBP1-206ENST00000567698 TP53INP1Q96A56 240 aa7.77□□□□□ -1.17
SHCBP1-206ENST00000567698 SHDQ96IW2 340 aa7.77□□□□□ -1.17
SHCBP1-206ENST00000567698 MEIS3P2A8K0S8 358 aa7.76□□□□□ -1.17
SHCBP1-206ENST00000567698 PLCG1P19174 1290 aa7.76□□□□□ -1.17
SHCBP1-206ENST00000567698 USP11P51784 963 aa7.76□□□□□ -1.17
SHCBP1-206ENST00000567698 ETF1P62495 437 aaKnown RBP7.76□□□□□ -1.17
SHCBP1-206ENST00000567698 RSPO4Q2I0M5 234 aaPredicted RBP7.76□□□□□ -1.17
SHCBP1-206ENST00000567698 CCDC81Q6ZN84 652 aa7.76□□□□□ -1.17
SHCBP1-206ENST00000567698 PRR23CQ6ZRP0 262 aa7.76□□□□□ -1.17
SHCBP1-206ENST00000567698 BEND4Q6ZU67 534 aa7.76□□□□□ -1.17
SHCBP1-206ENST00000567698 MCATQ8IVS2 390 aaKnown RBP7.76□□□□□ -1.17
SHCBP1-206ENST00000567698 SHISA5Q8N114 240 aa7.76□□□□□ -1.17
SHCBP1-206ENST00000567698 RBBP8NLQ8NC74 664 aaPredicted RBP7.76□□□□□ -1.17
SHCBP1-206ENST00000567698 FAM83CQ9BQN1 747 aa7.76□□□□□ -1.17
SHCBP1-206ENST00000567698 PIDD1Q9HB75 910 aa7.76□□□□□ -1.17
SHCBP1-206ENST00000567698 SLC22A31A6NKX4 558 aa7.75□□□□□ -1.17
SHCBP1-206ENST00000567698 UPK3BL1B0FP48 263 aa7.75□□□□□ -1.17
SHCBP1-206ENST00000567698 CHURC1-FNTBB4DL54 471 aa7.75□□□□□ -1.17
SHCBP1-206ENST00000567698 UPK3BL2E5RIL1 263 aa7.75□□□□□ -1.17
SHCBP1-206ENST00000567698 RBAK-RBAKDNI3L0D1 243 aa7.75□□□□□ -1.17
SHCBP1-206ENST00000567698 DHX15O43143 795 aaKnown RBP7.75□□□□□ -1.17
SHCBP1-206ENST00000567698 DNAJA1P31689 397 aaKnown RBP7.75□□□□□ -1.17
SHCBP1-206ENST00000567698 MCM4P33991 863 aa7.75□□□□□ -1.17
SHCBP1-206ENST00000567698 RANGAP1P46060 587 aaPredicted RBP7.75□□□□□ -1.17
SHCBP1-206ENST00000567698 ARID5AQ03989 594 aa7.75□□□□□ -1.17
SHCBP1-206ENST00000567698 GNL2Q13823 731 aaKnown RBP7.75□□□□□ -1.17
SHCBP1-206ENST00000567698 DOC2BQ14184 412 aa7.75□□□□□ -1.17
SHCBP1-206ENST00000567698 CLEC10AQ8IUN9 316 aa7.75□□□□□ -1.17
SHCBP1-206ENST00000567698 HID1Q8IV36 788 aa7.75□□□□□ -1.17
SHCBP1-206ENST00000567698 TMEM87BQ96K49 555 aa7.75□□□□□ -1.17
SHCBP1-206ENST00000567698 C7orf69Q9H7B7 122 aa7.75□□□□□ -1.17
SHCBP1-206ENST00000567698 PCOLCE2Q9UKZ9 415 aa7.75□□□□□ -1.17
SHCBP1-206ENST00000567698 RAXQ9Y2V3 346 aa7.75□□□□□ -1.17
SHCBP1-206ENST00000567698 DAGLAQ9Y4D2 1042 aa7.75□□□□□ -1.17
SHCBP1-206ENST00000567698 HMX2A2RU54 273 aa7.74□□□□□ -1.17
SHCBP1-206ENST00000567698 RNGTTO60942 597 aaKnown RBP7.74□□□□□ -1.17
SHCBP1-206ENST00000567698 CST3P01034 146 aaPredicted RBP7.74□□□□□ -1.17
SHCBP1-206ENST00000567698 GIPRP48546 466 aa7.74□□□□□ -1.17
SHCBP1-206ENST00000567698 PDE4BQ07343 736 aa7.74□□□□□ -1.17
SHCBP1-206ENST00000567698 OVOS1Q6IE37 1185 aa7.74□□□□□ -1.17
SHCBP1-206ENST00000567698 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.74□□□□□ -1.17
SHCBP1-206ENST00000567698 FAM169BQ8N8A8 192 aa7.74□□□□□ -1.17
SHCBP1-206ENST00000567698 PRKAG2Q9UGJ0 569 aa7.74□□□□□ -1.17
SHCBP1-206ENST00000567698 FAM95CA0A1B0GW59 222 aa7.73□□□□□ -1.17
SHCBP1-206ENST00000567698 H2AFB1P0C5Y9 115 aa7.73□□□□□ -1.17
SHCBP1-206ENST00000567698 H2AFB2P0C5Z0 115 aa7.73□□□□□ -1.17
SHCBP1-206ENST00000567698 ADMP35318 185 aa7.73□□□□□ -1.17
SHCBP1-206ENST00000567698 PRAMEF13Q5VWM6 474 aa7.73□□□□□ -1.17
SHCBP1-206ENST00000567698 SLC6A19Q695T7 634 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms