RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 NKX2-3Q8TAU0 364 aa33.89■■■■□ 3.02
UBFD1-206ENST00000566669 SMCR8Q8TEV9 937 aaPredicted RBP33.89■■■■□ 3.02
UBFD1-206ENST00000566669 SH3TC2Q8TF17 1288 aa33.89■■■■□ 3.02
UBFD1-206ENST00000566669 DBNDD2Q9BQY9 259 aa33.89■■■■□ 3.02
UBFD1-206ENST00000566669 TRIM75PA6NK02 468 aa33.88■■■■□ 3.01
UBFD1-206ENST00000566669 GRK4P32298 578 aa33.88■■■■□ 3.01
UBFD1-206ENST00000566669 PABPC4Q13310 644 aaKnown RBP eCLIP33.88■■■■□ 3.01
UBFD1-206ENST00000566669 ERC1Q8IUD2 1116 aa33.87■■■■□ 3.01
UBFD1-206ENST00000566669 MKI67P46013 3256 aaKnown RBP33.87■■■■□ 3.01
UBFD1-206ENST00000566669 CAP2P40123 477 aa33.86■■■■□ 3.01
UBFD1-206ENST00000566669 ZNF280CQ8ND82 737 aa33.86■■■■□ 3.01
UBFD1-206ENST00000566669 AS3MTQ9HBK9 375 aa33.86■■■■□ 3.01
UBFD1-206ENST00000566669 GINM1Q9NU53 330 aa33.86■■■■□ 3.01
UBFD1-206ENST00000566669 CAPN2P17655 700 aa33.85■■■■□ 3.01
UBFD1-206ENST00000566669 CTGFP29279 349 aa33.85■■■■□ 3.01
UBFD1-206ENST00000566669 UBXN2AP68543 259 aa33.85■■■■□ 3.01
UBFD1-206ENST00000566669 SLAIN1Q8ND83 568 aa33.85■■■■□ 3.01
UBFD1-206ENST00000566669 SH3RF3Q8TEJ3 882 aaPredicted RBP33.85■■■■□ 3.01
UBFD1-206ENST00000566669 SNRKQ9NRH2 765 aa33.85■■■■□ 3.01
UBFD1-206ENST00000566669 USP17L5A8MUK1 530 aa33.84■■■■□ 3.01
UBFD1-206ENST00000566669 CYP2E1P05181 493 aaPredicted RBP33.84■■■■□ 3.01
UBFD1-206ENST00000566669 HSP90AB4PQ58FF6 505 aa33.84■■■■□ 3.01
UBFD1-206ENST00000566669 FOXP4Q8IVH2 680 aaPredicted RBP33.84■■■■□ 3.01
UBFD1-206ENST00000566669 AATFQ9NY61 560 aaKnown RBP eCLIP33.84■■■■□ 3.01
UBFD1-206ENST00000566669 PCDH10Q9P2E7 1040 aa33.84■■■■□ 3.01
UBFD1-206ENST00000566669 MAST2Q6P0Q8 1798 aa33.83■■■■□ 3.01
UBFD1-206ENST00000566669 C1orf115Q9H7X2 142 aa33.83■■■■□ 3.01
UBFD1-206ENST00000566669 RLBP1P12271 317 aa33.82■■■■□ 3
UBFD1-206ENST00000566669 DBNLQ9UJU6 430 aaKnown RBP33.82■■■■□ 3
UBFD1-206ENST00000566669 BRCA2P51587 3418 aa33.82■■■■□ 3
UBFD1-206ENST00000566669 ASNSP08243 561 aa33.81■■■■□ 3
UBFD1-206ENST00000566669 GCLCP48506 637 aaPredicted RBP33.81■■■■□ 3
UBFD1-206ENST00000566669 SPP2Q13103 211 aa33.81■■■■□ 3
UBFD1-206ENST00000566669 TRIM34Q9BYJ4 488 aa33.81■■■■□ 3
UBFD1-206ENST00000566669 FAM110CQ1W6H9 321 aa33.8■■■■□ 3
UBFD1-206ENST00000566669 CEP85Q6P2H3 762 aa33.8■■■■□ 3
UBFD1-206ENST00000566669 METTL16Q86W50 562 aaKnown RBP33.8■■■■□ 3
UBFD1-206ENST00000566669 SLURP2P0DP57 97 aa33.79■■■■□ 3
UBFD1-206ENST00000566669 ZAP70P43403 619 aa33.79■■■■□ 3
UBFD1-206ENST00000566669 PRKCZQ05513 592 aa33.79■■■■□ 3
UBFD1-206ENST00000566669 WDR18Q9BV38 432 aa33.79■■■■□ 3
UBFD1-206ENST00000566669 BIN2Q9UBW5 565 aaPredicted RBP33.79■■■■□ 3
UBFD1-206ENST00000566669 PTPRFP10586 1907 aa33.79■■■■□ 3
UBFD1-206ENST00000566669 ZSWIM8A7E2V4 1837 aa33.79■■■■□ 3
UBFD1-206ENST00000566669 PHIPQ8WWQ0 1821 aa33.79■■■■□ 3
UBFD1-206ENST00000566669 FLT1P17948 1338 aa33.79■■■■□ 3
UBFD1-206ENST00000566669 FAM196BA6NMK8 535 aa33.78■■■■□ 3
UBFD1-206ENST00000566669 TNPO2O14787 897 aaKnown RBP33.78■■■■□ 3
UBFD1-206ENST00000566669 HLA-DOAP06340 250 aa33.78■■■■□ 3
UBFD1-206ENST00000566669 IRF5Q13568 498 aa33.78■■■■□ 3
UBFD1-206ENST00000566669 SH3D19Q5HYK7 790 aa33.78■■■■□ 3
UBFD1-206ENST00000566669 CRACR2BQ8N4Y2 399 aaPredicted RBP33.78■■■■□ 3
UBFD1-206ENST00000566669 PXYLP1Q8TE99 480 aa33.78■■■■□ 3
UBFD1-206ENST00000566669 TGFBRAP1Q8WUH2 860 aa33.78■■■■□ 3
UBFD1-206ENST00000566669 COA7Q96BR5 231 aa33.78■■■■□ 3
UBFD1-206ENST00000566669 MYCP01106 439 aaPredicted RBP33.77■■■■□ 3
UBFD1-206ENST00000566669 GJB1P08034 283 aa33.77■■■■□ 3
UBFD1-206ENST00000566669 EAF2Q96CJ1 260 aaPredicted RBP33.77■■■■□ 3
UBFD1-206ENST00000566669 ECM2O94769 699 aaPredicted RBP33.76■■■□□ 2.99
UBFD1-206ENST00000566669 CHMP4BQ9H444 224 aaKnown RBP33.76■■■□□ 2.99
UBFD1-206ENST00000566669 GJA8P48165 433 aa33.75■■■□□ 2.99
UBFD1-206ENST00000566669 MAP3K12Q12852 859 aa33.75■■■□□ 2.99
UBFD1-206ENST00000566669 CCDC8Q9H0W5 538 aaPredicted RBP33.75■■■□□ 2.99
UBFD1-206ENST00000566669 CCL5P13501 91 aa33.74■■■□□ 2.99
UBFD1-206ENST00000566669 CYP7A1P22680 504 aa33.74■■■□□ 2.99
UBFD1-206ENST00000566669 HMGCS2P54868 508 aa33.74■■■□□ 2.99
UBFD1-206ENST00000566669 TREML2Q5T2D2 321 aa33.74■■■□□ 2.99
UBFD1-206ENST00000566669 CCDC84Q86UT8 332 aaPredicted RBP33.74■■■□□ 2.99
UBFD1-206ENST00000566669 MAPKAPK5Q8IW41 473 aa33.74■■■□□ 2.99
UBFD1-206ENST00000566669 PIH1D3Q9NQM4 214 aaKnown RBP33.74■■■□□ 2.99
UBFD1-206ENST00000566669 FRMD4AQ9P2Q2 1039 aaPredicted RBP33.74■■■□□ 2.99
UBFD1-206ENST00000566669 C19orf81C9J6K1 198 aa33.73■■■□□ 2.99
UBFD1-206ENST00000566669 ADCY3O60266 1144 aa33.73■■■□□ 2.99
UBFD1-206ENST00000566669 IDH1O75874 414 aaKnown RBP33.73■■■□□ 2.99
UBFD1-206ENST00000566669 FLT3LGP49771 235 aa33.73■■■□□ 2.99
UBFD1-206ENST00000566669 MTFR1Q15390 333 aa33.73■■■□□ 2.99
UBFD1-206ENST00000566669 ADGRA1Q86SQ6 560 aa33.73■■■□□ 2.99
UBFD1-206ENST00000566669 ANKRD13CQ8N6S4 541 aa33.73■■■□□ 2.99
UBFD1-206ENST00000566669 RNF208Q9H0X6 261 aa33.73■■■□□ 2.99
UBFD1-206ENST00000566669 TMOD4Q9NZQ9 345 aa33.73■■■□□ 2.99
UBFD1-206ENST00000566669 BACE1P56817 501 aa33.72■■■□□ 2.99
UBFD1-206ENST00000566669 TLR7Q9NYK1 1049 aaKnown RBP33.72■■■□□ 2.99
UBFD1-206ENST00000566669 HMMRO75330 724 aa33.71■■■□□ 2.99
UBFD1-206ENST00000566669 TTF1Q15361 905 aaPredicted RBP33.71■■■□□ 2.99
UBFD1-206ENST00000566669 RPAP2Q8IXW5 612 aaPredicted RBP33.71■■■□□ 2.99
UBFD1-206ENST00000566669 GABRQQ9UN88 632 aa33.71■■■□□ 2.99
UBFD1-206ENST00000566669 MGAMO43451 1857 aa33.71■■■□□ 2.99
UBFD1-206ENST00000566669 LOC285556D6RIA3 1793 aa33.7■■■□□ 2.99
UBFD1-206ENST00000566669 AACSQ86V21 672 aa33.7■■■□□ 2.99
UBFD1-206ENST00000566669 PALD1Q9ULE6 856 aa33.7■■■□□ 2.99
UBFD1-206ENST00000566669 HOXA7P31268 230 aaPredicted RBP33.69■■■□□ 2.98
UBFD1-206ENST00000566669 RRP1BQ14684 758 aaKnown RBP33.69■■■□□ 2.98
UBFD1-206ENST00000566669 PANK1Q8TE04 598 aa33.69■■■□□ 2.98
UBFD1-206ENST00000566669 ASCC2Q9H1I8 757 aaPredicted RBP33.69■■■□□ 2.98
UBFD1-206ENST00000566669 DDX19BQ9UMR2 479 aa33.69■■■□□ 2.98
UBFD1-206ENST00000566669 EXOC6BQ9Y2D4 811 aa33.69■■■□□ 2.98
UBFD1-206ENST00000566669 USP17L10C9JJH3 530 aa33.68■■■□□ 2.98
UBFD1-206ENST00000566669 USP5P45974 858 aa33.68■■■□□ 2.98
UBFD1-206ENST00000566669 IRX3P78415 501 aaPredicted RBP33.68■■■□□ 2.98
UBFD1-206ENST00000566669 HTATIP2Q9BUP3 242 aa33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms