RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 CRNKL1Q9BZJ0 848 aaKnown RBP15.57■□□□□ 0.08
CNEP1R1-208ENST00000566482 PI4KBQ9UBF8 816 aa15.57■□□□□ 0.08
CNEP1R1-208ENST00000566482 STAP2Q9UGK3 403 aa15.57■□□□□ 0.08
CNEP1R1-208ENST00000566482 MBD4O95243 580 aa15.56■□□□□ 0.08
CNEP1R1-208ENST00000566482 PDE1AP54750 535 aa15.56■□□□□ 0.08
CNEP1R1-208ENST00000566482 INHBEP58166 350 aa15.56■□□□□ 0.08
CNEP1R1-208ENST00000566482 SLC4A8Q2Y0W8 1093 aa15.56■□□□□ 0.08
CNEP1R1-208ENST00000566482 IFNL1Q8IU54 200 aa15.56■□□□□ 0.08
CNEP1R1-208ENST00000566482 SCYL3Q8IZE3 742 aa15.56■□□□□ 0.08
CNEP1R1-208ENST00000566482 ARMT1Q9H993 441 aa15.56■□□□□ 0.08
CNEP1R1-208ENST00000566482 HERC5Q9UII4 1024 aaKnown RBP15.56■□□□□ 0.08
CNEP1R1-208ENST00000566482 MYH1P12882 1939 aa15.55■□□□□ 0.08
CNEP1R1-208ENST00000566482 DDX60LQ5H9U9 1706 aaKnown RBP15.55■□□□□ 0.08
CNEP1R1-208ENST00000566482 TESPA1A2RU30 521 aaPredicted RBP15.55■□□□□ 0.08
CNEP1R1-208ENST00000566482 IGF2BP3O00425 579 aaKnown RBP eCLIP15.55■□□□□ 0.08
CNEP1R1-208ENST00000566482 IRF6O14896 467 aa15.55■□□□□ 0.08
CNEP1R1-208ENST00000566482 CTNND1O60716 968 aaKnown RBP15.55■□□□□ 0.08
CNEP1R1-208ENST00000566482 HLA-DOAP06340 250 aa15.55■□□□□ 0.08
CNEP1R1-208ENST00000566482 GTF2A2P52657 109 aa15.55■□□□□ 0.08
CNEP1R1-208ENST00000566482 NUCB1Q02818 461 aa15.55■□□□□ 0.08
CNEP1R1-208ENST00000566482 PPATQ06203 517 aa15.55■□□□□ 0.08
CNEP1R1-208ENST00000566482 CHD1LQ86WJ1 897 aa15.55■□□□□ 0.08
CNEP1R1-208ENST00000566482 BRI3BPQ8WY22 251 aa15.55■□□□□ 0.08
CNEP1R1-208ENST00000566482 PICK1Q9NRD5 415 aa15.55■□□□□ 0.08
CNEP1R1-208ENST00000566482 DOCK1Q14185 1865 aa15.54■□□□□ 0.08
CNEP1R1-208ENST00000566482 NAV1Q8NEY1 1877 aa15.54■□□□□ 0.08
CNEP1R1-208ENST00000566482 CCL15-CCL14A0A0B4J2E2 113 aa15.54■□□□□ 0.08
CNEP1R1-208ENST00000566482 RRP1BQ14684 758 aaKnown RBP15.54■□□□□ 0.08
CNEP1R1-208ENST00000566482 CCL15Q16663 113 aa15.54■□□□□ 0.08
CNEP1R1-208ENST00000566482 METTL16Q86W50 562 aaKnown RBP15.54■□□□□ 0.08
CNEP1R1-208ENST00000566482 CRACR2BQ8N4Y2 399 aaPredicted RBP15.54■□□□□ 0.08
CNEP1R1-208ENST00000566482 SDR42E1Q8WUS8 393 aa15.54■□□□□ 0.08
CNEP1R1-208ENST00000566482 PTPN18Q99952 460 aa15.54■□□□□ 0.08
CNEP1R1-208ENST00000566482 PUS7LQ9H0K6 701 aaKnown RBP15.54■□□□□ 0.08
CNEP1R1-208ENST00000566482 DNAJC18Q9H819 358 aa15.54■□□□□ 0.08
CNEP1R1-208ENST00000566482 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.54■□□□□ 0.08
CNEP1R1-208ENST00000566482 RNF113AO15541 343 aaKnown RBP15.53■□□□□ 0.08
CNEP1R1-208ENST00000566482 PRKAB2O43741 272 aa15.53■□□□□ 0.08
CNEP1R1-208ENST00000566482 TBC1D8O95759 1140 aa15.53■□□□□ 0.08
CNEP1R1-208ENST00000566482 ZFYP08048 801 aaPredicted RBP15.53■□□□□ 0.08
CNEP1R1-208ENST00000566482 CETPP11597 493 aa15.53■□□□□ 0.08
CNEP1R1-208ENST00000566482 PTPRAP18433 802 aa15.53■□□□□ 0.08
CNEP1R1-208ENST00000566482 SNAPC2Q13487 334 aa15.53■□□□□ 0.08
CNEP1R1-208ENST00000566482 FOXP4Q8IVH2 680 aaPredicted RBP15.53■□□□□ 0.08
CNEP1R1-208ENST00000566482 APPBP2Q92624 585 aa15.53■□□□□ 0.08
CNEP1R1-208ENST00000566482 TRIM34Q9BYJ4 488 aa15.53■□□□□ 0.08
CNEP1R1-208ENST00000566482 DCP1AQ9NPI6 582 aaPredicted RBP15.53■□□□□ 0.08
CNEP1R1-208ENST00000566482 KCNH4Q9UQ05 1017 aa15.53■□□□□ 0.08
CNEP1R1-208ENST00000566482 ALDH1A1P00352 501 aa15.52■□□□□ 0.08
CNEP1R1-208ENST00000566482 POLR3DP05423 398 aaPredicted RBP15.52■□□□□ 0.08
CNEP1R1-208ENST00000566482 CAP2P40123 477 aa15.52■□□□□ 0.08
CNEP1R1-208ENST00000566482 LRRFIP1Q32MZ4 808 aaKnown RBP15.52■□□□□ 0.08
CNEP1R1-208ENST00000566482 OTUD7BQ6GQQ9 843 aa15.52■□□□□ 0.08
CNEP1R1-208ENST00000566482 TTC6Q86TZ1 520 aa15.52■□□□□ 0.08
CNEP1R1-208ENST00000566482 CCDC84Q86UT8 332 aaPredicted RBP15.52■□□□□ 0.08
CNEP1R1-208ENST00000566482 OSBP2Q969R2 916 aa15.52■□□□□ 0.08
CNEP1R1-208ENST00000566482 FSD1Q9BTV5 496 aa15.52■□□□□ 0.08
CNEP1R1-208ENST00000566482 R3HDMLQ9H3Y0 253 aa15.52■□□□□ 0.08
CNEP1R1-208ENST00000566482 MCM9Q9NXL9 1143 aa15.52■□□□□ 0.08
CNEP1R1-208ENST00000566482 ZHX2Q9Y6X8 837 aa15.52■□□□□ 0.08
CNEP1R1-208ENST00000566482 PLCD1P51178 756 aa15.51■□□□□ 0.07
CNEP1R1-208ENST00000566482 PLEKHM2Q8IWE5 1019 aa15.51■□□□□ 0.07
CNEP1R1-208ENST00000566482 CFHR5Q9BXR6 569 aa15.51■□□□□ 0.07
CNEP1R1-208ENST00000566482 EHD4Q9H223 541 aa15.51■□□□□ 0.07
CNEP1R1-208ENST00000566482 ATP8A2Q9NTI2 1148 aa15.51■□□□□ 0.07
CNEP1R1-208ENST00000566482 SERPINB13Q9UIV8 391 aa15.51■□□□□ 0.07
CNEP1R1-208ENST00000566482 ATAD5Q96QE3 1844 aa15.51■□□□□ 0.07
CNEP1R1-208ENST00000566482 PHIPQ8WWQ0 1821 aa15.5■□□□□ 0.07
CNEP1R1-208ENST00000566482 BTBD19C9JJ37 291 aa15.5■□□□□ 0.07
CNEP1R1-208ENST00000566482 CXCL11O14625 94 aa15.5■□□□□ 0.07
CNEP1R1-208ENST00000566482 CYP2D6P10635 497 aa15.5■□□□□ 0.07
CNEP1R1-208ENST00000566482 EVX2Q03828 476 aa15.5■□□□□ 0.07
CNEP1R1-208ENST00000566482 SHROOM1Q2M3G4 852 aaPredicted RBP15.5■□□□□ 0.07
CNEP1R1-208ENST00000566482 FAM43AQ8N2R8 423 aa15.5■□□□□ 0.07
CNEP1R1-208ENST00000566482 EVI5LQ96CN4 794 aa15.5■□□□□ 0.07
CNEP1R1-208ENST00000566482 STRBPQ96SI9 672 aaKnown RBP15.5■□□□□ 0.07
CNEP1R1-208ENST00000566482 AFG3L2Q9Y4W6 797 aa15.5■□□□□ 0.07
CNEP1R1-208ENST00000566482 SLC4A4Q9Y6R1 1079 aa15.5■□□□□ 0.07
CNEP1R1-208ENST00000566482 CASP8AP2Q9UKL3 1982 aa15.49■□□□□ 0.07
CNEP1R1-208ENST00000566482 M0R2C6 588 aa15.49■□□□□ 0.07
CNEP1R1-208ENST00000566482 GDF11O95390 407 aa15.49■□□□□ 0.07
CNEP1R1-208ENST00000566482 JAG1P78504 1218 aa15.49■□□□□ 0.07
CNEP1R1-208ENST00000566482 MOGSQ13724 837 aa15.49■□□□□ 0.07
CNEP1R1-208ENST00000566482 A0A0G2JLL6 359 aaPredicted RBP15.48■□□□□ 0.07
CNEP1R1-208ENST00000566482 TRIM75PA6NK02 468 aa15.48■□□□□ 0.07
CNEP1R1-208ENST00000566482 USP17L5A8MUK1 530 aa15.48■□□□□ 0.07
CNEP1R1-208ENST00000566482 GPR25O00155 361 aa15.48■□□□□ 0.07
CNEP1R1-208ENST00000566482 GPAA1O43292 621 aa15.48■□□□□ 0.07
CNEP1R1-208ENST00000566482 ASNSP08243 561 aa15.48■□□□□ 0.07
CNEP1R1-208ENST00000566482 SHMT1P34896 483 aa15.48■□□□□ 0.07
CNEP1R1-208ENST00000566482 GABPAQ06546 454 aa15.48■□□□□ 0.07
CNEP1R1-208ENST00000566482 CRHR2Q13324 411 aa15.48■□□□□ 0.07
CNEP1R1-208ENST00000566482 TAF1CQ15572 869 aaPredicted RBP15.48■□□□□ 0.07
CNEP1R1-208ENST00000566482 ZMYM1Q5SVZ6 1142 aa15.48■□□□□ 0.07
CNEP1R1-208ENST00000566482 TATDN1Q6P1N9 297 aa15.48■□□□□ 0.07
CNEP1R1-208ENST00000566482 PRRT2Q7Z6L0 340 aaPredicted RBP15.48■□□□□ 0.07
CNEP1R1-208ENST00000566482 TNS4Q8IZW8 715 aa15.48■□□□□ 0.07
CNEP1R1-208ENST00000566482 DDRGK1Q96HY6 314 aa15.48■□□□□ 0.07
CNEP1R1-208ENST00000566482 SEC62Q99442 399 aaKnown RBP15.48■□□□□ 0.07
CNEP1R1-208ENST00000566482 OSBPL3Q9H4L5 887 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms