RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 GPR101Q96P66 508 aaPredicted RBP10.39□□□□□ -0.75
LSM3P5-201ENST00000566307 PSMD1Q99460 953 aa10.39□□□□□ -0.75
LSM3P5-201ENST00000566307 ZSCAN16Q9H4T2 348 aaPredicted RBP10.39□□□□□ -0.75
LSM3P5-201ENST00000566307 LMBRD1Q9NUN5 540 aa10.39□□□□□ -0.75
LSM3P5-201ENST00000566307 BRPF3Q9ULD4 1205 aa10.39□□□□□ -0.75
LSM3P5-201ENST00000566307 ISY1Q9ULR0 285 aaKnown RBP10.39□□□□□ -0.75
LSM3P5-201ENST00000566307 CDK5RAP2Q96SN8 1893 aa10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 STK36Q9NRP7 1315 aa10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 PSME4Q14997 1843 aa10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 ERICH2A1L162 156 aa10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 PTPDC1A2A3K4 754 aa10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 USP17L12C9JPN9 530 aa10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 USP17L21D6R901 530 aa10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 MBD3O95983 291 aa10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 RHBDL3P58872 404 aa10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 TGFB2P61812 414 aa10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 PDE4BQ07343 736 aa10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 STK3Q13188 491 aa10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 SEC23AQ15436 765 aa10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 TMEM67Q5HYA8 995 aa10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 ATL3Q6DD88 541 aa10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 CPLX2Q6PUV4 134 aaKnown RBP10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 CHST3Q7LGC8 479 aa10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 AMOTL1Q8IY63 956 aa10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 RTKN2Q8IZC4 609 aa10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 TTLL6Q8N841 843 aa10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 ANKS1AQ92625 1134 aa10.38□□□□□ -0.75
LSM3P5-201ENST00000566307 CCDC196A0A1B0GTZ2 297 aa10.37□□□□□ -0.75
LSM3P5-201ENST00000566307 GOLGA8BA8MQT2 603 aa10.37□□□□□ -0.75
LSM3P5-201ENST00000566307 IFIT3O14879 490 aaKnown RBP10.37□□□□□ -0.75
LSM3P5-201ENST00000566307 ZBTB43O43298 467 aa10.37□□□□□ -0.75
LSM3P5-201ENST00000566307 BTDP43251 543 aa10.37□□□□□ -0.75
LSM3P5-201ENST00000566307 GTF2IP78347 998 aa10.37□□□□□ -0.75
LSM3P5-201ENST00000566307 WTAPQ15007 396 aa10.37□□□□□ -0.75
LSM3P5-201ENST00000566307 DIXDC1Q155Q3 683 aa10.37□□□□□ -0.75
LSM3P5-201ENST00000566307 GRIK5Q16478 980 aa10.37□□□□□ -0.75
LSM3P5-201ENST00000566307 MCTP1Q6DN14 999 aa10.37□□□□□ -0.75
LSM3P5-201ENST00000566307 SYNE3Q6ZMZ3 975 aa10.37□□□□□ -0.75
LSM3P5-201ENST00000566307 IQCA1Q86XH1 822 aa10.37□□□□□ -0.75
LSM3P5-201ENST00000566307 FAM184AQ8NB25 1140 aa10.37□□□□□ -0.75
LSM3P5-201ENST00000566307 DCBLD2Q96PD2 775 aa10.37□□□□□ -0.75
LSM3P5-201ENST00000566307 MTFR1LQ9H019 292 aa10.37□□□□□ -0.75
LSM3P5-201ENST00000566307 ZNF287Q9HBT7 754 aa10.37□□□□□ -0.75
LSM3P5-201ENST00000566307 TCP11L1Q9NUJ3 509 aa10.37□□□□□ -0.75
LSM3P5-201ENST00000566307 ELP1O95163 1332 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 MYO3BQ8WXR4 1341 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 CCDC69A6NI79 296 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 MINDY4BA8MYZ0 360 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 CPLX1O14810 134 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 GALR2O43603 387 aaPredicted RBP10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 JAK2O60674 1132 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 DDAH1O94760 285 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 CALM1P0DP23 149 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 CALM2P0DP24 149 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 CALM3P0DP25 149 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 PYGBP11216 843 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 FDPSP14324 419 aaKnown RBP10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 IFNAR1P17181 557 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 CHRNA5P30532 468 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 USP5P45974 858 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 METAP2P50579 478 aaKnown RBP eCLIP10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 NTRK3Q16288 839 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 CCDC93Q567U6 631 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 CERS5Q8N5B7 392 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 NKX2-3Q8TAU0 364 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 SH3RF3Q8TEJ3 882 aaPredicted RBP10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 ZSCAN10Q96SZ4 725 aaPredicted RBP10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 MAP3K14Q99558 947 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 UBAC1Q9BSL1 405 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 GPHNQ9NQX3 736 aaPredicted RBP10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 RYDENQ9NUL5 291 aaKnown RBP10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 DAGLAQ9Y4D2 1042 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 SLC12A7Q9Y666 1083 aa10.36□□□□□ -0.75
LSM3P5-201ENST00000566307 RIMBP2O15034 1052 aa10.35□□□□□ -0.75
LSM3P5-201ENST00000566307 ECE2O60344 883 aa10.35□□□□□ -0.75
LSM3P5-201ENST00000566307 KCNA3P22001 575 aa10.35□□□□□ -0.75
LSM3P5-201ENST00000566307 MMP14P50281 582 aa10.35□□□□□ -0.75
LSM3P5-201ENST00000566307 RESTQ13127 1097 aa10.35□□□□□ -0.75
LSM3P5-201ENST00000566307 DACT2Q5SW24 774 aa10.35□□□□□ -0.75
LSM3P5-201ENST00000566307 DGKHQ86XP1 1220 aa10.35□□□□□ -0.75
LSM3P5-201ENST00000566307 TEX11Q8IYF3 940 aa10.35□□□□□ -0.75
LSM3P5-201ENST00000566307 WASF1Q92558 559 aa10.35□□□□□ -0.75
LSM3P5-201ENST00000566307 SCAND2PQ9GZW5 306 aaPredicted RBP10.35□□□□□ -0.75
LSM3P5-201ENST00000566307 FAM217BQ9NTX9 383 aaPredicted RBP10.35□□□□□ -0.75
LSM3P5-201ENST00000566307 MCM9Q9NXL9 1143 aa10.35□□□□□ -0.75
LSM3P5-201ENST00000566307 JAG2Q9Y219 1238 aa10.35□□□□□ -0.75
LSM3P5-201ENST00000566307 PLIN4Q96Q06 1357 aa10.35□□□□□ -0.75
LSM3P5-201ENST00000566307 COL2A1P02458 1487 aaPredicted RBP10.35□□□□□ -0.75
LSM3P5-201ENST00000566307 TNKSO95271 1327 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 FLT1P17948 1338 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 BRCA1P38398 1863 aaKnown RBP10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 SCN9AQ15858 1988 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 VPS37CA5D8V6 355 aaPredicted RBP10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 USP17L3A6NCW0 530 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 USP17L4A6NCW7 530 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 GOLGA8AA7E2F4 631 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 G3V3G9 751 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 POLD1P28340 1107 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 NOVP48745 357 aa10.34□□□□□ -0.75
LSM3P5-201ENST00000566307 CCT2P78371 535 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms