RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 USP17L4A6NCW7 530 aa19.77■□□□□ 0.76
RAB40C-210ENST00000566290 STX6O43752 255 aa19.77■□□□□ 0.76
RAB40C-210ENST00000566290 ZSCAN22P10073 491 aaPredicted RBP19.77■□□□□ 0.76
RAB40C-210ENST00000566290 PCP11498 1178 aaKnown RBP19.77■□□□□ 0.76
RAB40C-210ENST00000566290 KLHL40Q2TBA0 621 aa19.77■□□□□ 0.76
RAB40C-210ENST00000566290 HABP4Q5JVS0 413 aaKnown RBP19.77■□□□□ 0.76
RAB40C-210ENST00000566290 USP17L1Q7RTZ2 530 aa19.77■□□□□ 0.76
RAB40C-210ENST00000566290 SMARCC2Q8TAQ2 1214 aa19.77■□□□□ 0.76
RAB40C-210ENST00000566290 CSRNP1Q96S65 589 aa19.77■□□□□ 0.76
RAB40C-210ENST00000566290 CD209Q9NNX6 404 aa19.77■□□□□ 0.76
RAB40C-210ENST00000566290 NID2Q14112 1375 aa19.76■□□□□ 0.75
RAB40C-210ENST00000566290 MBD4O95243 580 aa19.76■□□□□ 0.75
RAB40C-210ENST00000566290 SYT1P21579 422 aa19.76■□□□□ 0.75
RAB40C-210ENST00000566290 RPS12P25398 132 aaKnown RBP19.76■□□□□ 0.75
RAB40C-210ENST00000566290 GJB2P29033 226 aa19.76■□□□□ 0.75
RAB40C-210ENST00000566290 HMGN5P82970 282 aaKnown RBP19.76■□□□□ 0.75
RAB40C-210ENST00000566290 COL9A3Q14050 684 aaPredicted RBP19.76■□□□□ 0.75
RAB40C-210ENST00000566290 TBC1D10BQ4KMP7 808 aaPredicted RBP19.76■□□□□ 0.75
RAB40C-210ENST00000566290 DACT2Q5SW24 774 aa19.76■□□□□ 0.75
RAB40C-210ENST00000566290 RBM26Q5T8P6 1007 aaKnown RBP19.76■□□□□ 0.75
RAB40C-210ENST00000566290 SPTY2D1Q68D10 685 aaPredicted RBP19.76■□□□□ 0.75
RAB40C-210ENST00000566290 TTLL5Q6EMB2 1281 aa19.76■□□□□ 0.75
RAB40C-210ENST00000566290 CERS3Q8IU89 383 aa19.76■□□□□ 0.75
RAB40C-210ENST00000566290 CNNM2Q9H8M5 875 aa19.76■□□□□ 0.75
RAB40C-210ENST00000566290 ANAPC4Q9UJX5 808 aa19.76■□□□□ 0.75
RAB40C-210ENST00000566290 KIF3AQ9Y496 699 aa19.76■□□□□ 0.75
RAB40C-210ENST00000566290 LAMB1P07942 1786 aa19.75■□□□□ 0.75
RAB40C-210ENST00000566290 H7C1D1 291 aa19.75■□□□□ 0.75
RAB40C-210ENST00000566290 TRDNQ13061 729 aa19.75■□□□□ 0.75
RAB40C-210ENST00000566290 RALYLQ86SE5 291 aaKnown RBP19.75■□□□□ 0.75
RAB40C-210ENST00000566290 IFNL3Q8IZI9 196 aa19.75■□□□□ 0.75
RAB40C-210ENST00000566290 TDRD7Q8NHU6 1098 aaKnown RBP19.75■□□□□ 0.75
RAB40C-210ENST00000566290 WDR66Q8TBY9 1149 aa19.75■□□□□ 0.75
RAB40C-210ENST00000566290 BRF1Q92994 677 aa19.75■□□□□ 0.75
RAB40C-210ENST00000566290 FBXW7Q969H0 707 aa19.75■□□□□ 0.75
RAB40C-210ENST00000566290 CCDC102AQ96A19 550 aa19.75■□□□□ 0.75
RAB40C-210ENST00000566290 RIOK1Q9BRS2 568 aaKnown RBP19.75■□□□□ 0.75
RAB40C-210ENST00000566290 NBPF3Q9H094 633 aa19.75■□□□□ 0.75
RAB40C-210ENST00000566290 EPB41L4AQ9HCS5 686 aaPredicted RBP19.75■□□□□ 0.75
RAB40C-210ENST00000566290 POLR2AP24928 1970 aaKnown RBP19.74■□□□□ 0.75
RAB40C-210ENST00000566290 GSG1L2A8MUP6 293 aa19.74■□□□□ 0.75
RAB40C-210ENST00000566290 ZNF157P51786 506 aaPredicted RBP19.74■□□□□ 0.75
RAB40C-210ENST00000566290 ZNF804AQ7Z570 1209 aa19.74■□□□□ 0.75
RAB40C-210ENST00000566290 AGBL3Q8NEM8 1001 aa19.74■□□□□ 0.75
RAB40C-210ENST00000566290 TMEM87BQ96K49 555 aa19.74■□□□□ 0.75
RAB40C-210ENST00000566290 GBA2Q9HCG7 927 aaPredicted RBP19.74■□□□□ 0.75
RAB40C-210ENST00000566290 ASTN2O75129 1339 aaPredicted RBP19.74■□□□□ 0.75
RAB40C-210ENST00000566290 F13A1P00488 732 aa19.73■□□□□ 0.75
RAB40C-210ENST00000566290 RCAN1P53805 252 aa19.73■□□□□ 0.75
RAB40C-210ENST00000566290 GTF2IP78347 998 aa19.73■□□□□ 0.75
RAB40C-210ENST00000566290 STRIP1Q5VSL9 837 aa19.73■□□□□ 0.75
RAB40C-210ENST00000566290 STAG1Q8WVM7 1258 aa19.73■□□□□ 0.75
RAB40C-210ENST00000566290 NSUN4Q96CB9 384 aaKnown RBP19.73■□□□□ 0.75
RAB40C-210ENST00000566290 NAPBQ9H115 298 aa19.73■□□□□ 0.75
RAB40C-210ENST00000566290 RNF41Q9H4P4 317 aaPredicted RBP19.73■□□□□ 0.75
RAB40C-210ENST00000566290 LMBRD1Q9NUN5 540 aa19.73■□□□□ 0.75
RAB40C-210ENST00000566290 JAG2Q9Y219 1238 aa19.73■□□□□ 0.75
RAB40C-210ENST00000566290 MBD3O95983 291 aa19.72■□□□□ 0.75
RAB40C-210ENST00000566290 IL1R1P14778 569 aa19.72■□□□□ 0.75
RAB40C-210ENST00000566290 CYP7A1P22680 504 aa19.72■□□□□ 0.75
RAB40C-210ENST00000566290 ZNF280AP59817 542 aaPredicted RBP19.72■□□□□ 0.75
RAB40C-210ENST00000566290 CERS5Q8N5B7 392 aa19.72■□□□□ 0.75
RAB40C-210ENST00000566290 KRT23Q9C075 422 aa19.72■□□□□ 0.75
RAB40C-210ENST00000566290 MTMR6Q9Y217 621 aa19.72■□□□□ 0.75
RAB40C-210ENST00000566290 MAGEB6P1A0A0J9YX57 407 aa19.71■□□□□ 0.75
RAB40C-210ENST00000566290 PRC1O43663 620 aa19.71■□□□□ 0.75
RAB40C-210ENST00000566290 DHX16O60231 1041 aaKnown RBP19.71■□□□□ 0.75
RAB40C-210ENST00000566290 ANTXR2P58335 489 aa19.71■□□□□ 0.75
RAB40C-210ENST00000566290 FGD1P98174 961 aa19.71■□□□□ 0.75
RAB40C-210ENST00000566290 NAA16Q6N069 864 aaPredicted RBP19.71■□□□□ 0.75
RAB40C-210ENST00000566290 SGMS1Q86VZ5 419 aa19.71■□□□□ 0.75
RAB40C-210ENST00000566290 TBC1D10CQ8IV04 446 aa19.71■□□□□ 0.75
RAB40C-210ENST00000566290 LCORLQ8N3X6 602 aa19.71■□□□□ 0.75
RAB40C-210ENST00000566290 C2orf69Q8N8R5 385 aa19.71■□□□□ 0.75
RAB40C-210ENST00000566290 TCEANC2Q96MN5 208 aa19.71■□□□□ 0.75
RAB40C-210ENST00000566290 ARMT1Q9H993 441 aa19.71■□□□□ 0.75
RAB40C-210ENST00000566290 RAI14Q9P0K7 980 aa19.71■□□□□ 0.75
RAB40C-210ENST00000566290 SLC10A3P09131 477 aa19.7■□□□□ 0.74
RAB40C-210ENST00000566290 USP17L8P0C7I0 530 aa19.7■□□□□ 0.74
RAB40C-210ENST00000566290 LIFRP42702 1097 aa19.7■□□□□ 0.74
RAB40C-210ENST00000566290 CSPP1Q1MSJ5 1256 aa19.7■□□□□ 0.74
RAB40C-210ENST00000566290 KIF4BQ2VIQ3 1234 aa19.7■□□□□ 0.74
RAB40C-210ENST00000566290 AKNAD1Q5T1N1 836 aa19.7■□□□□ 0.74
RAB40C-210ENST00000566290 KRT26Q7Z3Y9 468 aa19.7■□□□□ 0.74
RAB40C-210ENST00000566290 NECAB1Q8N987 351 aa19.7■□□□□ 0.74
RAB40C-210ENST00000566290 ADM5C9JUS6 153 aa19.69■□□□□ 0.74
RAB40C-210ENST00000566290 FGRP09769 529 aa19.69■□□□□ 0.74
RAB40C-210ENST00000566290 PDIA3P30101 505 aaKnown RBP19.69■□□□□ 0.74
RAB40C-210ENST00000566290 DEKP35659 375 aaKnown RBP19.69■□□□□ 0.74
RAB40C-210ENST00000566290 SCRN1Q12765 414 aa19.69■□□□□ 0.74
RAB40C-210ENST00000566290 MCTP1Q6DN14 999 aa19.69■□□□□ 0.74
RAB40C-210ENST00000566290 NSUN7Q8NE18 718 aaKnown RBP19.69■□□□□ 0.74
RAB40C-210ENST00000566290 ABCF2Q9UG63 623 aa19.69■□□□□ 0.74
RAB40C-210ENST00000566290 ANGEL1Q9UNK9 670 aaKnown RBP19.69■□□□□ 0.74
RAB40C-210ENST00000566290 SLC4A4Q9Y6R1 1079 aa19.69■□□□□ 0.74
RAB40C-210ENST00000566290 SH2B2O14492 632 aaPredicted RBP19.68■□□□□ 0.74
RAB40C-210ENST00000566290 APPP05067 770 aa19.68■□□□□ 0.74
RAB40C-210ENST00000566290 GSTO1P78417 241 aa19.68■□□□□ 0.74
RAB40C-210ENST00000566290 PKN2Q16513 984 aaKnown RBP19.68■□□□□ 0.74
RAB40C-210ENST00000566290 KIAA0825Q8IV33 1275 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms