RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-208ENST00000566239 CYP2C8P10632 490 aa16.33■□□□□ 0.2
HACD3-208ENST00000566239 ERC1Q8IUD2 1116 aa16.33■□□□□ 0.2
HACD3-208ENST00000566239 TRIM47Q96LD4 638 aa16.33■□□□□ 0.2
HACD3-208ENST00000566239 TBC1D2Q9BYX2 928 aa16.33■□□□□ 0.2
HACD3-208ENST00000566239 DHX36Q9H2U1 1008 aaKnown RBP16.33■□□□□ 0.2
HACD3-208ENST00000566239 AATFQ9NY61 560 aaKnown RBP eCLIP16.33■□□□□ 0.2
HACD3-208ENST00000566239 SRRDQ9UH36 339 aa16.33■□□□□ 0.2
HACD3-208ENST00000566239 HERC5Q9UII4 1024 aaKnown RBP16.33■□□□□ 0.2
HACD3-208ENST00000566239 FAM196BA6NMK8 535 aa16.32■□□□□ 0.2
HACD3-208ENST00000566239 EN2P19622 333 aaPredicted RBP16.32■□□□□ 0.2
HACD3-208ENST00000566239 OSBPP22059 807 aa16.32■□□□□ 0.2
HACD3-208ENST00000566239 FCGRTP55899 365 aa16.32■□□□□ 0.2
HACD3-208ENST00000566239 CEP85Q6P2H3 762 aa16.32■□□□□ 0.2
HACD3-208ENST00000566239 MYPNQ86TC9 1320 aa16.32■□□□□ 0.2
HACD3-208ENST00000566239 RAET1EQ8TD07 263 aa16.32■□□□□ 0.2
HACD3-208ENST00000566239 SMCR8Q8TEV9 937 aaPredicted RBP16.32■□□□□ 0.2
HACD3-208ENST00000566239 SH3TC2Q8TF17 1288 aa16.32■□□□□ 0.2
HACD3-208ENST00000566239 PI4KBQ9UBF8 816 aa16.32■□□□□ 0.2
HACD3-208ENST00000566239 DBNLQ9UJU6 430 aaKnown RBP16.32■□□□□ 0.2
HACD3-208ENST00000566239 PNMA3Q9UL41 463 aa16.32■□□□□ 0.2
HACD3-208ENST00000566239 BCRP11274 1271 aa16.31■□□□□ 0.2
HACD3-208ENST00000566239 CTGFP29279 349 aa16.31■□□□□ 0.2
HACD3-208ENST00000566239 ZAP70P43403 619 aa16.31■□□□□ 0.2
HACD3-208ENST00000566239 PPP4CP60510 307 aa16.31■□□□□ 0.2
HACD3-208ENST00000566239 TRIM34Q9BYJ4 488 aa16.31■□□□□ 0.2
HACD3-208ENST00000566239 CCDC8Q9H0W5 538 aaPredicted RBP16.31■□□□□ 0.2
HACD3-208ENST00000566239 AS3MTQ9HBK9 375 aa16.31■□□□□ 0.2
HACD3-208ENST00000566239 AGTPBP1Q9UPW5 1226 aa16.31■□□□□ 0.2
HACD3-208ENST00000566239 CENPFP49454 3210 aa16.3■□□□□ 0.2
HACD3-208ENST00000566239 DOCK3Q8IZD9 2030 aa16.3■□□□□ 0.2
HACD3-208ENST00000566239 MYCP01106 439 aaPredicted RBP16.3■□□□□ 0.2
HACD3-208ENST00000566239 CAP2P40123 477 aa16.3■□□□□ 0.2
HACD3-208ENST00000566239 HSP90AB4PQ58FF6 505 aa16.3■□□□□ 0.2
HACD3-208ENST00000566239 PROCA1Q8NCQ7 364 aaPredicted RBP16.3■□□□□ 0.2
HACD3-208ENST00000566239 ZNF280CQ8ND82 737 aa16.3■□□□□ 0.2
HACD3-208ENST00000566239 PANK1Q8TE04 598 aa16.3■□□□□ 0.2
HACD3-208ENST00000566239 TGFBRAP1Q8WUH2 860 aa16.3■□□□□ 0.2
HACD3-208ENST00000566239 EAF2Q96CJ1 260 aaPredicted RBP16.3■□□□□ 0.2
HACD3-208ENST00000566239 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.3■□□□□ 0.2
HACD3-208ENST00000566239 FLT1P17948 1338 aa16.29■□□□□ 0.2
HACD3-208ENST00000566239 USP17L5A8MUK1 530 aa16.29■□□□□ 0.2
HACD3-208ENST00000566239 GRK4P32298 578 aa16.29■□□□□ 0.2
HACD3-208ENST00000566239 SPP2Q13103 211 aa16.29■□□□□ 0.2
HACD3-208ENST00000566239 PABPC4Q13310 644 aaKnown RBP eCLIP16.29■□□□□ 0.2
HACD3-208ENST00000566239 ADGRA1Q86SQ6 560 aa16.29■□□□□ 0.2
HACD3-208ENST00000566239 CCDC84Q86UT8 332 aaPredicted RBP16.29■□□□□ 0.2
HACD3-208ENST00000566239 CERS3Q8IU89 383 aa16.29■□□□□ 0.2
HACD3-208ENST00000566239 MAPKAPK5Q8IW41 473 aa16.29■□□□□ 0.2
HACD3-208ENST00000566239 CRACR2BQ8N4Y2 399 aaPredicted RBP16.29■□□□□ 0.2
HACD3-208ENST00000566239 PIH1D3Q9NQM4 214 aaKnown RBP16.29■□□□□ 0.2
HACD3-208ENST00000566239 TLR7Q9NYK1 1049 aaKnown RBP16.29■□□□□ 0.2
HACD3-208ENST00000566239 EXOC6BQ9Y2D4 811 aa16.29■□□□□ 0.2
HACD3-208ENST00000566239 MYH8P13535 1937 aa16.29■□□□□ 0.2
HACD3-208ENST00000566239 NAV1Q8NEY1 1877 aa16.29■□□□□ 0.2
HACD3-208ENST00000566239 IDH1O75874 414 aaKnown RBP16.28■□□□□ 0.2
HACD3-208ENST00000566239 TMED8Q6PL24 325 aaPredicted RBP16.28■□□□□ 0.2
HACD3-208ENST00000566239 FOXP4Q8IVH2 680 aaPredicted RBP16.28■□□□□ 0.2
HACD3-208ENST00000566239 GCC1Q96CN9 775 aa16.28■□□□□ 0.2
HACD3-208ENST00000566239 BIN2Q9UBW5 565 aaPredicted RBP16.28■□□□□ 0.2
HACD3-208ENST00000566239 MYH7P12883 1935 aa16.27■□□□□ 0.2
HACD3-208ENST00000566239 HLA-DOAP06340 250 aa16.27■□□□□ 0.2
HACD3-208ENST00000566239 ASNSP08243 561 aa16.27■□□□□ 0.2
HACD3-208ENST00000566239 CYP7A1P22680 504 aa16.27■□□□□ 0.2
HACD3-208ENST00000566239 UBXN2AP68543 259 aa16.27■□□□□ 0.2
HACD3-208ENST00000566239 PRKCZQ05513 592 aa16.27■□□□□ 0.2
HACD3-208ENST00000566239 TREML2Q5T2D2 321 aa16.27■□□□□ 0.2
HACD3-208ENST00000566239 AACSQ86V21 672 aa16.27■□□□□ 0.2
HACD3-208ENST00000566239 NKX2-3Q8TAU0 364 aa16.27■□□□□ 0.2
HACD3-208ENST00000566239 TNPO2O14787 897 aaKnown RBP16.26■□□□□ 0.19
HACD3-208ENST00000566239 HMGCS2P54868 508 aa16.26■□□□□ 0.19
HACD3-208ENST00000566239 MAP3K12Q12852 859 aa16.26■□□□□ 0.19
HACD3-208ENST00000566239 ANKRD13CQ8N6S4 541 aa16.26■□□□□ 0.19
HACD3-208ENST00000566239 SLAIN1Q8ND83 568 aa16.26■□□□□ 0.19
HACD3-208ENST00000566239 CHMP4BQ9H444 224 aaKnown RBP16.26■□□□□ 0.19
HACD3-208ENST00000566239 GINM1Q9NU53 330 aa16.26■□□□□ 0.19
HACD3-208ENST00000566239 PALD1Q9ULE6 856 aa16.26■□□□□ 0.19
HACD3-208ENST00000566239 DDX19BQ9UMR2 479 aa16.26■□□□□ 0.19
HACD3-208ENST00000566239 HMMRO75330 724 aa16.25■□□□□ 0.19
HACD3-208ENST00000566239 USP5P45974 858 aa16.25■□□□□ 0.19
HACD3-208ENST00000566239 GCLCP48506 637 aaPredicted RBP16.25■□□□□ 0.19
HACD3-208ENST00000566239 RRP1BQ14684 758 aaKnown RBP16.25■□□□□ 0.19
HACD3-208ENST00000566239 FAM110CQ1W6H9 321 aa16.25■□□□□ 0.19
HACD3-208ENST00000566239 SH3D19Q5HYK7 790 aa16.25■□□□□ 0.19
HACD3-208ENST00000566239 METTL16Q86W50 562 aaKnown RBP16.25■□□□□ 0.19
HACD3-208ENST00000566239 RPAP2Q8IXW5 612 aaPredicted RBP16.25■□□□□ 0.19
HACD3-208ENST00000566239 CLASRPQ8N2M8 674 aaKnown RBP16.25■□□□□ 0.19
HACD3-208ENST00000566239 MAGEB6Q8N7X4 407 aa16.25■□□□□ 0.19
HACD3-208ENST00000566239 RHPN1Q8TCX5 695 aa16.25■□□□□ 0.19
HACD3-208ENST00000566239 COA7Q96BR5 231 aa16.25■□□□□ 0.19
HACD3-208ENST00000566239 WDR18Q9BV38 432 aa16.25■□□□□ 0.19
HACD3-208ENST00000566239 SAP30BPQ9UHR5 308 aaKnown RBP16.25■□□□□ 0.19
HACD3-208ENST00000566239 GABRQQ9UN88 632 aa16.25■□□□□ 0.19
HACD3-208ENST00000566239 DDX60LQ5H9U9 1706 aaKnown RBP16.25■□□□□ 0.19
HACD3-208ENST00000566239 ADCY3O60266 1144 aa16.24■□□□□ 0.19
HACD3-208ENST00000566239 DYNLL1P63167 89 aaKnown RBP16.24■□□□□ 0.19
HACD3-208ENST00000566239 TTF1Q15361 905 aaPredicted RBP16.24■□□□□ 0.19
HACD3-208ENST00000566239 MTFR1Q15390 333 aa16.24■□□□□ 0.19
HACD3-208ENST00000566239 MIGA1Q8NAN2 632 aa16.24■□□□□ 0.19
HACD3-208ENST00000566239 KIF1BPQ96EK5 621 aa16.24■□□□□ 0.19
HACD3-208ENST00000566239 IL1RAPL2Q9NP60 686 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms