RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 ADORA1P30542 326 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 USP5P45974 858 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 ATP2B2Q01814 1243 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 PI16Q6UXB8 463 aa11.9□□□□□ -0.5
USB1-212ENST00000566082 DEXIO95424 95 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 CYP26C1Q6V0L0 522 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 BICDL1Q6ZP65 573 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 SRGAP1Q7Z6B7 1085 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 SLC35F6Q8N357 371 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 MKNK2Q9HBH9 465 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 SAMSN1Q9NSI8 373 aaKnown RBP11.89□□□□□ -0.51
USB1-212ENST00000566082 FAN1Q9Y2M0 1017 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 HECW2Q9P2P5 1572 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 ZNF532Q9HCE3 1301 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 SOWAHDA6NJG2 315 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 TACC1O75410 805 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 PRDM1O75626 825 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 CERS3Q8IU89 383 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 GOLGA5Q8TBA6 731 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 VPS54Q9P1Q0 977 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 WWC3Q9ULE0 1092 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 V9GY48 417 aaPredicted RBP11.89□□□□□ -0.51
USB1-212ENST00000566082 G3V3G9 751 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 DCAF8Q5TAQ9 597 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 SAMD1Q6SPF0 538 aaPredicted RBP11.89□□□□□ -0.51
USB1-212ENST00000566082 SMYD4Q8IYR2 804 aaPredicted RBP11.89□□□□□ -0.51
USB1-212ENST00000566082 RGS22Q8NE09 1264 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 CDC23Q9UJX2 597 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 CPS1P31327 1500 aa11.89□□□□□ -0.51
USB1-212ENST00000566082 CASP14P31944 242 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 ST3GAL1Q11201 340 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 FCHSD1Q86WN1 690 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 SMARCC2Q8TAQ2 1214 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 DPF2Q92785 391 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 EEF2KMTQ96G04 330 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 BMP2KQ9NSY1 1161 aaPredicted RBP11.88□□□□□ -0.51
USB1-212ENST00000566082 ZC3H13Q5T200 1668 aaKnown RBP11.88□□□□□ -0.51
USB1-212ENST00000566082 CCDC151A5D8V7 595 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 CC2D1AQ6P1N0 951 aaPredicted RBP11.88□□□□□ -0.51
USB1-212ENST00000566082 NYAP1Q6ZVC0 841 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 IFT81Q8WYA0 676 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 PYM1Q9BRP8 204 aaKnown RBP11.88□□□□□ -0.51
USB1-212ENST00000566082 PLEKHA4Q9H4M7 779 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 VAT1LQ9HCJ6 419 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 ADAM21Q9UKJ8 722 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 RRP15Q9Y3B9 282 aaKnown RBP11.88□□□□□ -0.51
USB1-212ENST00000566082 ARHGAP31Q2M1Z3 1444 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 GOLGA6CA6NDK9 693 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 ERLIN2O94905 339 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 GOLGA6DP0CG33 693 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 ASIC1P78348 528 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 IRX5P78411 483 aaPredicted RBP11.88□□□□□ -0.51
USB1-212ENST00000566082 ZCRB1Q8TBF4 217 aaKnown RBP11.88□□□□□ -0.51
USB1-212ENST00000566082 C19orf44Q9H6X5 657 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 EXOC1Q9NV70 894 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 GOLGA6AQ9NYA3 693 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 ZMYM6O95789 1325 aa11.88□□□□□ -0.51
USB1-212ENST00000566082 ENC1O14682 589 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 ATP8B1O43520 1251 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 NOP2P46087 812 aaKnown RBP11.87□□□□□ -0.51
USB1-212ENST00000566082 RAD51AP2Q09MP3 1159 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 CAVIN4Q5BKX8 364 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 WWC2Q6AWC2 1192 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 APOA5Q6Q788 366 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 TOGARAM2Q6ZUX3 1019 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 MICALCLQ6ZW33 695 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 OTUD6BQ8N6M0 293 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 SEPT11Q9NVA2 429 aaKnown RBP11.87□□□□□ -0.51
USB1-212ENST00000566082 SETD1BQ9UPS6 1966 aaKnown RBP11.87□□□□□ -0.51
USB1-212ENST00000566082 TMCO5BA8MYB1 307 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 OPA1O60313 960 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 ITGA6P23229 1130 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 ACTN2P35609 894 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 ARID5AQ03989 594 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 TBC1D8BQ0IIM8 1120 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 CDC5LQ99459 802 aaKnown RBP11.87□□□□□ -0.51
USB1-212ENST00000566082 MYO6Q9UM54 1294 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 STX8Q9UNK0 236 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 NEXMIFQ5QGS0 1516 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 SH3TC1Q8TE82 1336 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 CD163L1Q9NR16 1453 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 IRS4O14654 1257 aaPredicted RBP11.87□□□□□ -0.51
USB1-212ENST00000566082 ZMYND10O75800 440 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 ERCC3P19447 782 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 PAK1Q13153 545 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 CCDC40Q4G0X9 1142 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 CT47A1Q5JQC4 288 aaPredicted RBP11.87□□□□□ -0.51
USB1-212ENST00000566082 NAA15Q9BXJ9 866 aaKnown RBP11.87□□□□□ -0.51
USB1-212ENST00000566082 CCDC113Q9H0I3 377 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 LMTK2Q8IWU2 1503 aa11.87□□□□□ -0.51
USB1-212ENST00000566082 GOLGA6L7A0A1B0GV03 622 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 RBL2Q08999 1139 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 IFFO1Q0D2I5 559 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 TUBB2AQ13885 445 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 PIK3AP1Q6ZUJ8 805 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 SND1Q7KZF4 910 aaKnown RBP eCLIP11.86□□□□□ -0.51
USB1-212ENST00000566082 FAM114A1Q8IWE2 563 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 ACRBPQ8NEB7 543 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 PPM1EQ8WY54 764 aa11.86□□□□□ -0.51
USB1-212ENST00000566082 WDR24Q96S15 920 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms