RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 ZNF112Q9UJU3 913 aa15.04■□□□□ -0
SF3B3-206ENST00000565990 UNCXA6NJT0 531 aa15.03■□□□□ -0
SF3B3-206ENST00000565990 PHF20L1A8MW92 1017 aa15.03■□□□□ -0
SF3B3-206ENST00000565990 USP2O75604 605 aaPredicted RBP15.03■□□□□ -0
SF3B3-206ENST00000565990 FGRP09769 529 aa15.03■□□□□ -0
SF3B3-206ENST00000565990 CYP2D6P10635 497 aa15.03■□□□□ -0
SF3B3-206ENST00000565990 TDO2P48775 406 aa15.03■□□□□ -0
SF3B3-206ENST00000565990 NECTIN1Q15223 517 aa15.03■□□□□ -0
SF3B3-206ENST00000565990 TATDN1Q6P1N9 297 aa15.03■□□□□ -0
SF3B3-206ENST00000565990 KIAA1211Q6ZU35 1233 aa15.03■□□□□ -0
SF3B3-206ENST00000565990 SERPINB13Q9UIV8 391 aa15.03■□□□□ -0
SF3B3-206ENST00000565990 LAMB1P07942 1786 aa15.03■□□□□ -0
SF3B3-206ENST00000565990 SSC5DA1L4H1 1573 aa15.02■□□□□ -0
SF3B3-206ENST00000565990 SMIM22K7EJ46 135 aa15.02■□□□□ -0
SF3B3-206ENST00000565990 EIF5BO60841 1220 aaKnown RBP15.02■□□□□ -0
SF3B3-206ENST00000565990 REC8O95072 547 aa15.02■□□□□ -0
SF3B3-206ENST00000565990 HLA-DOAP06340 250 aa15.02■□□□□ -0
SF3B3-206ENST00000565990 FKBP1BP68106 108 aa15.02■□□□□ -0
SF3B3-206ENST00000565990 EVX2Q03828 476 aa15.02■□□□□ -0
SF3B3-206ENST00000565990 MIGA2Q7L4E1 593 aa15.02■□□□□ -0
SF3B3-206ENST00000565990 KLRG1Q96E93 195 aa15.02■□□□□ -0
SF3B3-206ENST00000565990 USP26Q9BXU7 913 aa15.02■□□□□ -0
SF3B3-206ENST00000565990 DNAJC18Q9H819 358 aa15.02■□□□□ -0
SF3B3-206ENST00000565990 DAXXQ9UER7 740 aaPredicted RBP15.02■□□□□ -0
SF3B3-206ENST00000565990 U3KPZ7 1027 aaPredicted RBP15.02■□□□□ -0
SF3B3-206ENST00000565990 LAMA4Q16363 1823 aa15.01□□□□□ -0.01
SF3B3-206ENST00000565990 ROBO3Q96MS0 1386 aa15.01□□□□□ -0.01
SF3B3-206ENST00000565990 CYP2D7A0A087X1C5 515 aa15.01□□□□□ -0.01
SF3B3-206ENST00000565990 MINDY4BA8MYZ0 360 aa15.01□□□□□ -0.01
SF3B3-206ENST00000565990 SLURP2P0DP57 97 aa15.01□□□□□ -0.01
SF3B3-206ENST00000565990 NF2P35240 595 aa15.01□□□□□ -0.01
SF3B3-206ENST00000565990 PPARAQ07869 468 aa15.01□□□□□ -0.01
SF3B3-206ENST00000565990 DCAF15Q66K64 600 aa15.01□□□□□ -0.01
SF3B3-206ENST00000565990 AMOTL1Q8IY63 956 aa15.01□□□□□ -0.01
SF3B3-206ENST00000565990 KCNB2Q92953 911 aa15.01□□□□□ -0.01
SF3B3-206ENST00000565990 ANO2Q9NQ90 1003 aa15.01□□□□□ -0.01
SF3B3-206ENST00000565990 MYH8P13535 1937 aa15□□□□□ -0.01
SF3B3-206ENST00000565990 ZNF213O14771 459 aa15□□□□□ -0.01
SF3B3-206ENST00000565990 PPP1R12BO60237 982 aaPredicted RBP15□□□□□ -0.01
SF3B3-206ENST00000565990 CELF2O95319 508 aaKnown RBP15□□□□□ -0.01
SF3B3-206ENST00000565990 SEC24BO95487 1268 aa15□□□□□ -0.01
SF3B3-206ENST00000565990 LDLRAD1Q5T700 205 aa15□□□□□ -0.01
SF3B3-206ENST00000565990 C16orf86Q6ZW13 317 aa15□□□□□ -0.01
SF3B3-206ENST00000565990 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15□□□□□ -0.015e-15■□□□□ 9.3
SF3B3-206ENST00000565990 ZNF341Q9BYN7 854 aa15□□□□□ -0.01
SF3B3-206ENST00000565990 NBPF3Q9H094 633 aa15□□□□□ -0.01
SF3B3-206ENST00000565990 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15□□□□□ -0.01
SF3B3-206ENST00000565990 SWAP70Q9UH65 585 aa15□□□□□ -0.01
SF3B3-206ENST00000565990 PAPPA2Q9BXP8 1791 aa14.99□□□□□ -0.01
SF3B3-206ENST00000565990 CYP21A2P08686 494 aa14.99□□□□□ -0.01
SF3B3-206ENST00000565990 PCP11498 1178 aaKnown RBP14.99□□□□□ -0.01
SF3B3-206ENST00000565990 SHMT1P34896 483 aa14.99□□□□□ -0.01
SF3B3-206ENST00000565990 HSPA4P34932 840 aa14.99□□□□□ -0.01
SF3B3-206ENST00000565990 CDK8P49336 464 aa14.99□□□□□ -0.01
SF3B3-206ENST00000565990 IMMTQ16891 758 aaKnown RBP14.99□□□□□ -0.01
SF3B3-206ENST00000565990 TSGA10IPQ3SY00 556 aa14.99□□□□□ -0.01
SF3B3-206ENST00000565990 DYNLL2Q96FJ2 89 aa14.99□□□□□ -0.01
SF3B3-206ENST00000565990 RBM8AQ9Y5S9 174 aaKnown RBP14.99□□□□□ -0.01
SF3B3-206ENST00000565990 TACC3Q9Y6A5 838 aa14.99□□□□□ -0.01
SF3B3-206ENST00000565990 CTNND1O60716 968 aaKnown RBP14.98□□□□□ -0.01
SF3B3-206ENST00000565990 SLC3A2P08195 630 aaKnown RBP14.98□□□□□ -0.01
SF3B3-206ENST00000565990 MAP3K9P80192 1104 aa14.98□□□□□ -0.01
SF3B3-206ENST00000565990 RRP1BQ14684 758 aaKnown RBP14.98□□□□□ -0.01
SF3B3-206ENST00000565990 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.98□□□□□ -0.01
SF3B3-206ENST00000565990 C2orf69Q8N8R5 385 aa14.98□□□□□ -0.01
SF3B3-206ENST00000565990 GBA2Q9HCG7 927 aaPredicted RBP14.98□□□□□ -0.01
SF3B3-206ENST00000565990 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.98□□□□□ -0.01
SF3B3-206ENST00000565990 TMEM88BA6NKF7 163 aa14.97□□□□□ -0.01
SF3B3-206ENST00000565990 ORC4O43929 436 aa14.97□□□□□ -0.01
SF3B3-206ENST00000565990 CAP2P40123 477 aa14.97□□□□□ -0.01
SF3B3-206ENST00000565990 IREB2P48200 963 aaKnown RBP14.97□□□□□ -0.01
SF3B3-206ENST00000565990 NT5C2P49902 561 aa14.97□□□□□ -0.01
SF3B3-206ENST00000565990 APLP1P51693 650 aa14.97□□□□□ -0.01
SF3B3-206ENST00000565990 CTDSPL2Q05D32 466 aa14.97□□□□□ -0.01
SF3B3-206ENST00000565990 SLC4A8Q2Y0W8 1093 aa14.97□□□□□ -0.01
SF3B3-206ENST00000565990 AKNAD1Q5T1N1 836 aa14.97□□□□□ -0.01
SF3B3-206ENST00000565990 MOB2Q70IA6 237 aa14.97□□□□□ -0.01
SF3B3-206ENST00000565990 ARMC9Q7Z3E5 817 aa14.97□□□□□ -0.01
SF3B3-206ENST00000565990 CRACR2BQ8N4Y2 399 aaPredicted RBP14.97□□□□□ -0.01
SF3B3-206ENST00000565990 STAG1Q8WVM7 1258 aa14.97□□□□□ -0.01
SF3B3-206ENST00000565990 ZNF287Q9HBT7 754 aa14.97□□□□□ -0.01
SF3B3-206ENST00000565990 INCENPQ9NQS7 918 aa14.97□□□□□ -0.01
SF3B3-206ENST00000565990 GINM1Q9NU53 330 aa14.97□□□□□ -0.01
SF3B3-206ENST00000565990 ANGEL1Q9UNK9 670 aaKnown RBP14.97□□□□□ -0.01
SF3B3-206ENST00000565990 FZD1Q9UP38 647 aa14.97□□□□□ -0.01
SF3B3-206ENST00000565990 ATAD5Q96QE3 1844 aa14.96□□□□□ -0.01
SF3B3-206ENST00000565990 FAM196BA6NMK8 535 aa14.96□□□□□ -0.01
SF3B3-206ENST00000565990 UBE2Q2LH0YL09 131 aa14.96□□□□□ -0.01
SF3B3-206ENST00000565990 SLC27A2O14975 620 aa14.96□□□□□ -0.01
SF3B3-206ENST00000565990 RASA1P20936 1047 aa14.96□□□□□ -0.01
SF3B3-206ENST00000565990 HAND2P61296 217 aa14.96□□□□□ -0.01
SF3B3-206ENST00000565990 JAG1P78504 1218 aa14.96□□□□□ -0.01
SF3B3-206ENST00000565990 PDE4BQ07343 736 aa14.96□□□□□ -0.01
SF3B3-206ENST00000565990 NBR1Q14596 966 aa14.96□□□□□ -0.01
SF3B3-206ENST00000565990 CERKLQ49MI3 558 aaPredicted RBP14.96□□□□□ -0.01
SF3B3-206ENST00000565990 NOL9Q5SY16 702 aaKnown RBP14.96□□□□□ -0.01
SF3B3-206ENST00000565990 CREB3L3Q68CJ9 461 aa14.96□□□□□ -0.01
SF3B3-206ENST00000565990 MFSD6Q6ZSS7 791 aa14.96□□□□□ -0.01
SF3B3-206ENST00000565990 SAPCD2Q86UD0 394 aa14.96□□□□□ -0.01
SF3B3-206ENST00000565990 ANKRD13AQ8IZ07 590 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms