RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 ETFBP38117 255 aa6.27□□□□□ -1.41
LINC00561-201ENST00000565815 CLCQ05315 142 aa6.27□□□□□ -1.41
LINC00561-201ENST00000565815 PPP2R3AQ06190 1150 aa6.27□□□□□ -1.41
LINC00561-201ENST00000565815 RUFY4Q6ZNE9 571 aa6.27□□□□□ -1.41
LINC00561-201ENST00000565815 FMR1NBQ8N0W7 255 aaPredicted RBP6.27□□□□□ -1.41
LINC00561-201ENST00000565815 PCDHA4Q9UN74 947 aa6.27□□□□□ -1.41
LINC00561-201ENST00000565815 REREQ9P2R6 1566 aa6.26□□□□□ -1.41
LINC00561-201ENST00000565815 PIP4K2BP78356 416 aa6.26□□□□□ -1.41
LINC00561-201ENST00000565815 LMNB2Q03252 620 aa6.26□□□□□ -1.41
LINC00561-201ENST00000565815 POU4F3Q15319 338 aa6.26□□□□□ -1.41
LINC00561-201ENST00000565815 RPS26P11Q5JNZ5 115 aaPredicted RBP6.26□□□□□ -1.41
LINC00561-201ENST00000565815 WIPI1Q5MNZ9 446 aaPredicted RBP6.26□□□□□ -1.41
LINC00561-201ENST00000565815 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.26□□□□□ -1.41
LINC00561-201ENST00000565815 ZNF408Q9H9D4 720 aa6.26□□□□□ -1.41
LINC00561-201ENST00000565815 SUPT16HQ9Y5B9 1047 aaKnown RBP6.26□□□□□ -1.41
LINC00561-201ENST00000565815 RAPGEF3O95398 923 aa6.26□□□□□ -1.41
LINC00561-201ENST00000565815 MCM4P33991 863 aa6.26□□□□□ -1.41
LINC00561-201ENST00000565815 CD68P34810 354 aaPredicted RBP6.26□□□□□ -1.41
LINC00561-201ENST00000565815 GATAD2BQ8WXI9 593 aa6.26□□□□□ -1.41
LINC00561-201ENST00000565815 DPH2Q9BQC3 489 aaPredicted RBP6.26□□□□□ -1.41
LINC00561-201ENST00000565815 CORO1BQ9BR76 489 aa6.26□□□□□ -1.41
LINC00561-201ENST00000565815 WDR18Q9BV38 432 aa6.26□□□□□ -1.41
LINC00561-201ENST00000565815 KCNQ5Q9NR82 932 aa6.26□□□□□ -1.41
LINC00561-201ENST00000565815 CNTLNQ9NXG0 1405 aa6.25□□□□□ -1.41
LINC00561-201ENST00000565815 RAPGEF6Q8TEU7 1601 aa6.25□□□□□ -1.41
LINC00561-201ENST00000565815 PLEKHD1A6NEE1 506 aa6.25□□□□□ -1.41
LINC00561-201ENST00000565815 REC114Q7Z4M0 266 aa6.25□□□□□ -1.41
LINC00561-201ENST00000565815 PPP1R9AQ9ULJ8 1098 aa6.25□□□□□ -1.41
LINC00561-201ENST00000565815 FAM177BA6PVY3 158 aa6.25□□□□□ -1.41
LINC00561-201ENST00000565815 HSPA2P54652 639 aa6.25□□□□□ -1.41
LINC00561-201ENST00000565815 FBXW10Q5XX13 1052 aa6.25□□□□□ -1.41
LINC00561-201ENST00000565815 PMFBP1Q8TBY8 1022 aa6.25□□□□□ -1.41
LINC00561-201ENST00000565815 ANAPC16Q96DE5 110 aa6.25□□□□□ -1.41
LINC00561-201ENST00000565815 CILPO75339 1184 aa6.24□□□□□ -1.41
LINC00561-201ENST00000565815 PPM1JQ5JR12 505 aa6.24□□□□□ -1.41
LINC00561-201ENST00000565815 PCDHGC5Q9Y5F6 944 aa6.24□□□□□ -1.41
LINC00561-201ENST00000565815 LTBP4Q8N2S1 1624 aa6.24□□□□□ -1.41
LINC00561-201ENST00000565815 AKAP4Q5JQC9 854 aa6.24□□□□□ -1.41
LINC00561-201ENST00000565815 LGR6Q9HBX8 967 aa6.24□□□□□ -1.41
LINC00561-201ENST00000565815 STRCQ7RTU9 1775 aa6.23□□□□□ -1.41
LINC00561-201ENST00000565815 NTF4P34130 210 aa6.23□□□□□ -1.41
LINC00561-201ENST00000565815 KIAA1211Q6ZU35 1233 aa6.23□□□□□ -1.41
LINC00561-201ENST00000565815 ACAD11Q709F0 780 aa6.23□□□□□ -1.41
LINC00561-201ENST00000565815 PRDM6Q9NQX0 595 aa6.23□□□□□ -1.41
LINC00561-201ENST00000565815 AGLP35573 1532 aa6.23□□□□□ -1.41
LINC00561-201ENST00000565815 HCLS1P14317 486 aaPredicted RBP6.23□□□□□ -1.41
LINC00561-201ENST00000565815 LMNB1P20700 586 aa6.23□□□□□ -1.41
LINC00561-201ENST00000565815 ARID5AQ03989 594 aa6.23□□□□□ -1.41
LINC00561-201ENST00000565815 RASGRP4Q8TDF6 673 aa6.23□□□□□ -1.41
LINC00561-201ENST00000565815 CACNA2D2Q9NY47 1150 aa6.23□□□□□ -1.41
LINC00561-201ENST00000565815 PCDHB14Q9Y5E9 798 aa6.23□□□□□ -1.41
LINC00561-201ENST00000565815 NPATQ14207 1427 aa6.23□□□□□ -1.41
LINC00561-201ENST00000565815 TRAPPC8Q9Y2L5 1435 aa6.23□□□□□ -1.41
LINC00561-201ENST00000565815 POLR2BP30876 1174 aaKnown RBP6.22□□□□□ -1.41
LINC00561-201ENST00000565815 RPS26P62854 115 aaKnown RBP6.22□□□□□ -1.41
LINC00561-201ENST00000565815 NKG7Q16617 165 aa6.22□□□□□ -1.41
LINC00561-201ENST00000565815 DUOXA2Q1HG44 320 aa6.22□□□□□ -1.41
LINC00561-201ENST00000565815 HNRNPLLQ8WVV9 542 aaKnown RBP6.22□□□□□ -1.41
LINC00561-201ENST00000565815 DRC1Q96MC2 740 aa6.22□□□□□ -1.41
LINC00561-201ENST00000565815 NT5C1AQ9BXI3 368 aa6.22□□□□□ -1.41
LINC00561-201ENST00000565815 FBRSQ9HAH7 460 aa6.22□□□□□ -1.41
LINC00561-201ENST00000565815 MICAL1Q8TDZ2 1067 aa6.22□□□□□ -1.41
LINC00561-201ENST00000565815 TNKS2Q9H2K2 1166 aa6.22□□□□□ -1.41
LINC00561-201ENST00000565815 CYP8B1Q9UNU6 501 aa6.22□□□□□ -1.41
LINC00561-201ENST00000565815 ADAMTS8Q9UP79 889 aa6.22□□□□□ -1.41
LINC00561-201ENST00000565815 AP4E1Q9UPM8 1137 aa6.22□□□□□ -1.41
LINC00561-201ENST00000565815 SAMD9Q5K651 1589 aa6.22□□□□□ -1.41
LINC00561-201ENST00000565815 CCDC85CA6NKD9 419 aa6.21□□□□□ -1.41
LINC00561-201ENST00000565815 UPK3BL1B0FP48 263 aa6.21□□□□□ -1.41
LINC00561-201ENST00000565815 UPK3BL2E5RIL1 263 aa6.21□□□□□ -1.41
LINC00561-201ENST00000565815 GFRA2O00451 464 aa6.21□□□□□ -1.41
LINC00561-201ENST00000565815 AOC2O75106 756 aa6.21□□□□□ -1.41
LINC00561-201ENST00000565815 CYP11A1P05108 521 aa6.21□□□□□ -1.41
LINC00561-201ENST00000565815 SUZ12Q15022 739 aaKnown RBP6.21□□□□□ -1.41
LINC00561-201ENST00000565815 ZYXQ15942 572 aaKnown RBP6.21□□□□□ -1.41
LINC00561-201ENST00000565815 FAM117BQ6P1L5 589 aa6.21□□□□□ -1.41
LINC00561-201ENST00000565815 NKD1Q969G9 470 aa6.21□□□□□ -1.41
LINC00561-201ENST00000565815 GMLQ99445 158 aa6.21□□□□□ -1.41
LINC00561-201ENST00000565815 NCOA1Q15788 1441 aa6.21□□□□□ -1.41
LINC00561-201ENST00000565815 PRXQ9BXM0 1461 aa6.21□□□□□ -1.41
LINC00561-201ENST00000565815 HECW1Q76N89 1606 aa6.21□□□□□ -1.42
LINC00561-201ENST00000565815 PWP1Q13610 501 aa6.21□□□□□ -1.42
LINC00561-201ENST00000565815 CELF2-AS1Q8N7Q2 184 aa6.21□□□□□ -1.42
LINC00561-201ENST00000565815 SHDQ96IW2 340 aa6.21□□□□□ -1.42
LINC00561-201ENST00000565815 PIF1Q9H611 641 aa6.21□□□□□ -1.42
LINC00561-201ENST00000565815 FAM105AQ9NUU6 356 aa6.21□□□□□ -1.42
LINC00561-201ENST00000565815 HIF3AQ9Y2N7 669 aa6.21□□□□□ -1.42
LINC00561-201ENST00000565815 PLCH2O75038 1416 aa6.2□□□□□ -1.42
LINC00561-201ENST00000565815 PLA2R1Q13018 1463 aa6.2□□□□□ -1.42
LINC00561-201ENST00000565815 EFCAB2Q5VUJ9 269 aa6.2□□□□□ -1.42
LINC00561-201ENST00000565815 ZSCAN1Q8NBB4 408 aa6.2□□□□□ -1.42
LINC00561-201ENST00000565815 SOX17Q9H6I2 414 aaPredicted RBP6.2□□□□□ -1.42
LINC00561-201ENST00000565815 FAM86C1Q9NVL1 165 aa6.2□□□□□ -1.42
LINC00561-201ENST00000565815 WIPF1O43516 503 aa6.2□□□□□ -1.42
LINC00561-201ENST00000565815 NEFMP07197 916 aa6.2□□□□□ -1.42
LINC00561-201ENST00000565815 ITGAEP38570 1179 aa6.2□□□□□ -1.42
LINC00561-201ENST00000565815 SOX9P48436 509 aa6.2□□□□□ -1.42
LINC00561-201ENST00000565815 AP3B2Q13367 1082 aa6.2□□□□□ -1.42
LINC00561-201ENST00000565815 KLHL23Q8NBE8 558 aa6.2□□□□□ -1.42
LINC00561-201ENST00000565815 LNPKQ9C0E8 428 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms