RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 CTDSPL2Q05D32 466 aa9.22□□□□□ -0.93
CDH1-208ENST00000565810 TSGA10IPQ3SY00 556 aa9.22□□□□□ -0.93
CDH1-208ENST00000565810 RRP12Q5JTH9 1297 aaKnown RBP9.22□□□□□ -0.93
CDH1-208ENST00000565810 MAP1SQ66K74 1059 aaPredicted RBP9.22□□□□□ -0.93
CDH1-208ENST00000565810 CHADLQ6NUI6 762 aa9.22□□□□□ -0.93
CDH1-208ENST00000565810 C16orf86Q6ZW13 317 aa9.22□□□□□ -0.93
CDH1-208ENST00000565810 SH3BP5LQ7L8J4 393 aa9.22□□□□□ -0.93
CDH1-208ENST00000565810 NCOA7Q8NI08 942 aa9.22□□□□□ -0.93
CDH1-208ENST00000565810 STAG1Q8WVM7 1258 aa9.22□□□□□ -0.93
CDH1-208ENST00000565810 KCNB2Q92953 911 aa9.22□□□□□ -0.93
CDH1-208ENST00000565810 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.22□□□□□ -0.93
CDH1-208ENST00000565810 ATRNL1Q5VV63 1379 aa9.22□□□□□ -0.93
CDH1-208ENST00000565810 PSME4Q14997 1843 aa9.21□□□□□ -0.93
CDH1-208ENST00000565810 ADM5C9JUS6 153 aa9.21□□□□□ -0.94
CDH1-208ENST00000565810 E7EWF7 191 aa9.21□□□□□ -0.94
CDH1-208ENST00000565810 PPP1R12BO60237 982 aaPredicted RBP9.21□□□□□ -0.94
CDH1-208ENST00000565810 RANBP6O60518 1105 aaKnown RBP9.21□□□□□ -0.94
CDH1-208ENST00000565810 HMGB1P09429 215 aaKnown RBP9.21□□□□□ -0.94
CDH1-208ENST00000565810 POTEIP0CG38 1075 aa9.21□□□□□ -0.94
CDH1-208ENST00000565810 POTEJP0CG39 1038 aa9.21□□□□□ -0.94
CDH1-208ENST00000565810 CDK8P49336 464 aa9.21□□□□□ -0.94
CDH1-208ENST00000565810 RBM25P49756 843 aaKnown RBP9.21□□□□□ -0.94
CDH1-208ENST00000565810 GABPAQ06546 454 aa9.21□□□□□ -0.94
CDH1-208ENST00000565810 NBPF12Q5TAG4 269 aaPredicted RBP9.21□□□□□ -0.94
CDH1-208ENST00000565810 PRAMEF18Q5VWM3 479 aa9.21□□□□□ -0.94
CDH1-208ENST00000565810 MIGA2Q7L4E1 593 aa9.21□□□□□ -0.94
CDH1-208ENST00000565810 METTL16Q86W50 562 aaKnown RBP9.21□□□□□ -0.94
CDH1-208ENST00000565810 RASEFQ8IZ41 740 aa9.21□□□□□ -0.94
CDH1-208ENST00000565810 ESR2Q92731 530 aa9.21□□□□□ -0.94
CDH1-208ENST00000565810 DYNLL2Q96FJ2 89 aa9.21□□□□□ -0.94
CDH1-208ENST00000565810 CCDC17Q96LX7 622 aa9.21□□□□□ -0.94
CDH1-208ENST00000565810 JAKMIP1Q96N16 626 aaKnown RBP9.21□□□□□ -0.94
CDH1-208ENST00000565810 TEPSINQ96N21 525 aa9.21□□□□□ -0.94
CDH1-208ENST00000565810 TBC1D32Q96NH3 1257 aa9.21□□□□□ -0.94
CDH1-208ENST00000565810 NEK1Q96PY6 1258 aa9.21□□□□□ -0.94
CDH1-208ENST00000565810 ZNF341Q9BYN7 854 aa9.21□□□□□ -0.94
CDH1-208ENST00000565810 GLIS2Q9BZE0 524 aaPredicted RBP9.21□□□□□ -0.94
CDH1-208ENST00000565810 SNX14Q9Y5W7 946 aa9.21□□□□□ -0.94
CDH1-208ENST00000565810 WDR90Q96KV7 1748 aa9.21□□□□□ -0.94
CDH1-208ENST00000565810 COL2A1P02458 1487 aaPredicted RBP9.21□□□□□ -0.94
CDH1-208ENST00000565810 TSPY2A6NKD2 308 aa9.2□□□□□ -0.94
CDH1-208ENST00000565810 ORC4O43929 436 aa9.2□□□□□ -0.94
CDH1-208ENST00000565810 PRDM1O75626 825 aa9.2□□□□□ -0.94
CDH1-208ENST00000565810 FGRP09769 529 aa9.2□□□□□ -0.94
CDH1-208ENST00000565810 TTLL12Q14166 644 aaPredicted RBP9.2□□□□□ -0.94
CDH1-208ENST00000565810 CERKLQ49MI3 558 aaPredicted RBP9.2□□□□□ -0.94
CDH1-208ENST00000565810 BLOC1S2Q6QNY1 142 aa9.2□□□□□ -0.94
CDH1-208ENST00000565810 TBC1D10CQ8IV04 446 aa9.2□□□□□ -0.94
CDH1-208ENST00000565810 CDCA5Q96FF9 252 aa9.2□□□□□ -0.94
CDH1-208ENST00000565810 TM6SF1Q9BZW5 370 aa9.2□□□□□ -0.94
CDH1-208ENST00000565810 CABP5Q9NP86 173 aa9.2□□□□□ -0.94
CDH1-208ENST00000565810 MYH2Q9UKX2 1941 aa9.2□□□□□ -0.94
CDH1-208ENST00000565810 ERICH2A1L162 156 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 B4E1Z4 1266 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 MPHOSPH10O00566 681 aaKnown RBP9.19□□□□□ -0.94
CDH1-208ENST00000565810 KIF3CO14782 793 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 TOMM70O94826 608 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 TSPY3P0CV98 308 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 TSPY8P0CW00 308 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 CASTP20810 708 aaKnown RBP9.19□□□□□ -0.94
CDH1-208ENST00000565810 MCM5P33992 734 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 IREB2P48200 963 aaKnown RBP9.19□□□□□ -0.94
CDH1-208ENST00000565810 FGD1P98174 961 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 TFAP4Q01664 338 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 MAP3K10Q02779 954 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 EVX2Q03828 476 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 SART3Q15020 963 aaKnown RBP9.19□□□□□ -0.94
CDH1-208ENST00000565810 CCDC178Q5BJE1 867 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 PPP4R3BQ5MIZ7 849 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 TATDN1Q6P1N9 297 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 ARMC9Q7Z3E5 817 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 IQCA1Q86XH1 822 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 CDAN1Q8IWY9 1227 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 ZNF784Q8NCA9 323 aaPredicted RBP9.19□□□□□ -0.94
CDH1-208ENST00000565810 SLC44A5Q8NCS7 719 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 SMC1BQ8NDV3 1235 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 IL27Q8NEV9 243 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 ZNF408Q9H9D4 720 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 INCENPQ9NQS7 918 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.19□□□□□ -0.94
CDH1-208ENST00000565810 CYP46A1Q9Y6A2 500 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 ROBO3Q96MS0 1386 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 ZNF646O15015 1829 aaPredicted RBP9.19□□□□□ -0.94
CDH1-208ENST00000565810 AK9Q5TCS8 1911 aa9.19□□□□□ -0.94
CDH1-208ENST00000565810 FAM196BA6NMK8 535 aa9.18□□□□□ -0.94
CDH1-208ENST00000565810 SMIM22K7EJ46 135 aa9.18□□□□□ -0.94
CDH1-208ENST00000565810 KDM4AO75164 1064 aa9.18□□□□□ -0.94
CDH1-208ENST00000565810 RASA1P20936 1047 aa9.18□□□□□ -0.94
CDH1-208ENST00000565810 SHMT1P34896 483 aa9.18□□□□□ -0.94
CDH1-208ENST00000565810 SCN4AP35499 1836 aa9.18□□□□□ -0.94
CDH1-208ENST00000565810 NEDD4P46934 1319 aa9.18□□□□□ -0.94
CDH1-208ENST00000565810 PRKG1Q13976 671 aa9.18□□□□□ -0.94
CDH1-208ENST00000565810 RABEP1Q15276 862 aa9.18□□□□□ -0.94
CDH1-208ENST00000565810 ABCB5Q2M3G0 1257 aa9.18□□□□□ -0.94
CDH1-208ENST00000565810 ADCK5Q3MIX3 580 aa9.18□□□□□ -0.94
CDH1-208ENST00000565810 STOX1Q6ZVD7 989 aa9.18□□□□□ -0.94
CDH1-208ENST00000565810 DHX32Q7L7V1 743 aaKnown RBP9.18□□□□□ -0.94
CDH1-208ENST00000565810 C2orf69Q8N8R5 385 aa9.18□□□□□ -0.94
CDH1-208ENST00000565810 RBM46Q8TBY0 533 aaKnown RBP9.18□□□□□ -0.94
CDH1-208ENST00000565810 WRNIP1Q96S55 665 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms